BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030905E5_B06_e426_04.seq (1530 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_01_0067 - 538929-539143,539306-539344,539579-539635,539727-53... 136 6e-32 10_08_0411 - 17725661-17725842,17726066-17726104,17726379-177264... 133 4e-31 03_06_0698 + 35608666-35608709,35608810-35608958,35609493-356095... 88 2e-17 04_04_0677 + 27195264-27195291,27196034-27196271,27196350-271965... 33 0.79 04_03_0588 + 17595299-17596151,17597519-17597665,17598562-175988... 30 4.2 05_03_0564 - 15502458-15503303,15503394-15503474,15503572-155036... 29 9.7 05_03_0563 - 15493570-15494415,15494506-15494586,15494684-154947... 29 9.7 05_03_0562 - 15484733-15485578,15485669-15485749,15485847-154858... 29 9.7 >03_01_0067 - 538929-539143,539306-539344,539579-539635,539727-539875, 540298-540365,542009-542093,542185-542246,542612-542700, 543034-543088,544127-544252,544477-544576,544697-545499 Length = 615 Score = 136 bits (328), Expect = 6e-32 Identities = 73/156 (46%), Positives = 97/156 (62%), Gaps = 13/156 (8%) Frame = +3 Query: 231 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 410 MN +KLKK+ VR GGKG+ RRKKK VH T TDD VN IPGIEEVN+ Sbjct: 441 MNVDKLKKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNNIPGIEEVNIF 500 Query: 411 KDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLA--- 581 KDD VI F NPK QAS+ ANT+ ++G + K++ ++LP I++QLGP+ L+ L+RLA Sbjct: 501 KDD-VVIQFQNPKVQASIGANTWVVSGTPQTKKLQDLLPTIINQLGPDNLDNLRRLAEQF 559 Query: 582 --------SSVAAPKPLDEDDEVPNLV--GNFDEAS 659 + +A D+DD+VP LV F+EA+ Sbjct: 560 QKQVPGAEAGASAGNAQDDDDDVPELVPGETFEEAA 595 >10_08_0411 - 17725661-17725842,17726066-17726104,17726379-17726435, 17726524-17726672,17727195-17727262,17727796-17727798 Length = 165 Score = 133 bits (321), Expect = 4e-31 Identities = 64/126 (50%), Positives = 83/126 (65%) Frame = +3 Query: 228 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 407 +MN +KLKK+ VR GGKG+ RRKKK VH T TDD VNTIPGIEEVN+ Sbjct: 1 MMNVDKLKKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNI 60 Query: 408 IKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLASS 587 KDD VI F NPK QAS+ ANT+ ++G + K++ ++LP I++QLGP+ L+ L+RLA Sbjct: 61 FKDD-VVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQ 119 Query: 588 VAAPKP 605 P Sbjct: 120 FQKQAP 125 >03_06_0698 + 35608666-35608709,35608810-35608958,35609493-35609531, 35610024-35610163,35611130-35611244,35611281-35611399, 35611413-35611979 Length = 390 Score = 87.8 bits (208), Expect = 2e-17 Identities = 59/141 (41%), Positives = 74/141 (52%), Gaps = 11/141 (7%) Frame = +3 Query: 267 VRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKDDGTVIHFNNP 446 VR GGKGT RRKKK VH T TDD VNTIP IEEVN+ KDD VI F NP Sbjct: 5 VRTGGKGTVRRKKKAVHKTGTTDDKRLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFVNP 63 Query: 447 KAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRL---------ASSVAAP 599 K++ ++LPGI++QLGP+ + LKR+ A+ A Sbjct: 64 -------------------KELQDVLPGIINQLGPDNMEHLKRIAEEMQKQVAAAGATAQ 104 Query: 600 KPLDEDDEVPNLV--GNFDEA 656 + DD+VP LV NF+E+ Sbjct: 105 AKEENDDDVPELVPGENFEES 125 >04_04_0677 + 27195264-27195291,27196034-27196271,27196350-27196500, 27196578-27196972,27197270-27197339,27197414-27197696, 27197972-27198297,27198409-27199368 Length = 816 Score = 32.7 bits (71), Expect = 0.79 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -3 Query: 388 PGMVFTDNFLRDDCNFLSSVAAVTCTTFFLRLGVPLPPMRTCDCS 254 PG+VF + RD FL +V V +GVP PP R CS Sbjct: 670 PGLVFDAGY-RDYLQFLCAVPGVDDAAVLRAVGVPCPPSRARWCS 713 >04_03_0588 + 17595299-17596151,17597519-17597665,17598562-17598837, 17599108-17599805 Length = 657 Score = 30.3 bits (65), Expect = 4.2 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = -1 Query: 297 ASVYPYRRCAPATVVS-LAFPYSLCYFNVLKFSTDTRST 184 +S+Y + RCA A +V +F +S+ Y + KF++DT S+ Sbjct: 182 SSMYTWNRCAYAALVEESSFNFSMIYDSSSKFNSDTVSS 220 >05_03_0564 - 15502458-15503303,15503394-15503474,15503572-15503620, 15503786-15503828,15504576-15504633,15504720-15504858, 15504980-15505107 Length = 447 Score = 29.1 bits (62), Expect = 9.7 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 552 EGLNQLKRLASSVAAPKPLDEDDEVPNLVGNFDEA 656 EG + + A +P+ DDE NLV NF EA Sbjct: 180 EGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEA 214 >05_03_0563 - 15493570-15494415,15494506-15494586,15494684-15494732, 15494898-15494940,15495688-15495745,15495832-15495970, 15496092-15496219 Length = 447 Score = 29.1 bits (62), Expect = 9.7 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 552 EGLNQLKRLASSVAAPKPLDEDDEVPNLVGNFDEA 656 EG + + A +P+ DDE NLV NF EA Sbjct: 180 EGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEA 214 >05_03_0562 - 15484733-15485578,15485669-15485749,15485847-15485895, 15486061-15486103,15486851-15486908,15486995-15487133, 15487255-15487382 Length = 447 Score = 29.1 bits (62), Expect = 9.7 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 552 EGLNQLKRLASSVAAPKPLDEDDEVPNLVGNFDEA 656 EG + + A +P+ DDE NLV NF EA Sbjct: 180 EGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEA 214 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 29,893,989 Number of Sequences: 37544 Number of extensions: 512209 Number of successful extensions: 923 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 906 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 918 length of database: 14,793,348 effective HSP length: 85 effective length of database: 11,602,108 effective search space used: 4919293792 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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