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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_B06_e426_04.seq
         (1530 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0067 - 538929-539143,539306-539344,539579-539635,539727-53...   136   6e-32
10_08_0411 - 17725661-17725842,17726066-17726104,17726379-177264...   133   4e-31
03_06_0698 + 35608666-35608709,35608810-35608958,35609493-356095...    88   2e-17
04_04_0677 + 27195264-27195291,27196034-27196271,27196350-271965...    33   0.79 
04_03_0588 + 17595299-17596151,17597519-17597665,17598562-175988...    30   4.2  
05_03_0564 - 15502458-15503303,15503394-15503474,15503572-155036...    29   9.7  
05_03_0563 - 15493570-15494415,15494506-15494586,15494684-154947...    29   9.7  
05_03_0562 - 15484733-15485578,15485669-15485749,15485847-154858...    29   9.7  

>03_01_0067 -
           538929-539143,539306-539344,539579-539635,539727-539875,
           540298-540365,542009-542093,542185-542246,542612-542700,
           543034-543088,544127-544252,544477-544576,544697-545499
          Length = 615

 Score =  136 bits (328), Expect = 6e-32
 Identities = 73/156 (46%), Positives = 97/156 (62%), Gaps = 13/156 (8%)
 Frame = +3

Query: 231 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 410
           MN +KLKK+   VR GGKG+ RRKKK VH T  TDD           VN IPGIEEVN+ 
Sbjct: 441 MNVDKLKKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNNIPGIEEVNIF 500

Query: 411 KDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLA--- 581
           KDD  VI F NPK QAS+ ANT+ ++G  + K++ ++LP I++QLGP+ L+ L+RLA   
Sbjct: 501 KDD-VVIQFQNPKVQASIGANTWVVSGTPQTKKLQDLLPTIINQLGPDNLDNLRRLAEQF 559

Query: 582 --------SSVAAPKPLDEDDEVPNLV--GNFDEAS 659
                   +  +A    D+DD+VP LV    F+EA+
Sbjct: 560 QKQVPGAEAGASAGNAQDDDDDVPELVPGETFEEAA 595


>10_08_0411 -
           17725661-17725842,17726066-17726104,17726379-17726435,
           17726524-17726672,17727195-17727262,17727796-17727798
          Length = 165

 Score =  133 bits (321), Expect = 4e-31
 Identities = 64/126 (50%), Positives = 83/126 (65%)
 Frame = +3

Query: 228 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 407
           +MN +KLKK+   VR GGKG+ RRKKK VH T  TDD           VNTIPGIEEVN+
Sbjct: 1   MMNVDKLKKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNI 60

Query: 408 IKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLASS 587
            KDD  VI F NPK QAS+ ANT+ ++G  + K++ ++LP I++QLGP+ L+ L+RLA  
Sbjct: 61  FKDD-VVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQ 119

Query: 588 VAAPKP 605
                P
Sbjct: 120 FQKQAP 125


>03_06_0698 +
           35608666-35608709,35608810-35608958,35609493-35609531,
           35610024-35610163,35611130-35611244,35611281-35611399,
           35611413-35611979
          Length = 390

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 59/141 (41%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
 Frame = +3

Query: 267 VRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKDDGTVIHFNNP 446
           VR GGKGT RRKKK VH T  TDD           VNTIP IEEVN+ KDD  VI F NP
Sbjct: 5   VRTGGKGTVRRKKKAVHKTGTTDDKRLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFVNP 63

Query: 447 KAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRL---------ASSVAAP 599
                              K++ ++LPGI++QLGP+ +  LKR+         A+   A 
Sbjct: 64  -------------------KELQDVLPGIINQLGPDNMEHLKRIAEEMQKQVAAAGATAQ 104

Query: 600 KPLDEDDEVPNLV--GNFDEA 656
              + DD+VP LV   NF+E+
Sbjct: 105 AKEENDDDVPELVPGENFEES 125


>04_04_0677 +
           27195264-27195291,27196034-27196271,27196350-27196500,
           27196578-27196972,27197270-27197339,27197414-27197696,
           27197972-27198297,27198409-27199368
          Length = 816

 Score = 32.7 bits (71), Expect = 0.79
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -3

Query: 388 PGMVFTDNFLRDDCNFLSSVAAVTCTTFFLRLGVPLPPMRTCDCS 254
           PG+VF   + RD   FL +V  V        +GVP PP R   CS
Sbjct: 670 PGLVFDAGY-RDYLQFLCAVPGVDDAAVLRAVGVPCPPSRARWCS 713


>04_03_0588 +
           17595299-17596151,17597519-17597665,17598562-17598837,
           17599108-17599805
          Length = 657

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -1

Query: 297 ASVYPYRRCAPATVVS-LAFPYSLCYFNVLKFSTDTRST 184
           +S+Y + RCA A +V   +F +S+ Y +  KF++DT S+
Sbjct: 182 SSMYTWNRCAYAALVEESSFNFSMIYDSSSKFNSDTVSS 220


>05_03_0564 -
           15502458-15503303,15503394-15503474,15503572-15503620,
           15503786-15503828,15504576-15504633,15504720-15504858,
           15504980-15505107
          Length = 447

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 552 EGLNQLKRLASSVAAPKPLDEDDEVPNLVGNFDEA 656
           EG   +  +    A  +P+  DDE  NLV NF EA
Sbjct: 180 EGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEA 214


>05_03_0563 -
           15493570-15494415,15494506-15494586,15494684-15494732,
           15494898-15494940,15495688-15495745,15495832-15495970,
           15496092-15496219
          Length = 447

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 552 EGLNQLKRLASSVAAPKPLDEDDEVPNLVGNFDEA 656
           EG   +  +    A  +P+  DDE  NLV NF EA
Sbjct: 180 EGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEA 214


>05_03_0562 -
           15484733-15485578,15485669-15485749,15485847-15485895,
           15486061-15486103,15486851-15486908,15486995-15487133,
           15487255-15487382
          Length = 447

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 552 EGLNQLKRLASSVAAPKPLDEDDEVPNLVGNFDEA 656
           EG   +  +    A  +P+  DDE  NLV NF EA
Sbjct: 180 EGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEA 214


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,893,989
Number of Sequences: 37544
Number of extensions: 512209
Number of successful extensions: 923
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4919293792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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