Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_B06_e426_04.seq
(1530 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 191 5e-48
BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 191 5e-48
AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 191 5e-48
AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 191 5e-48
AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 191 5e-48
X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 183 2e-45
X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 183 2e-45
X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 183 2e-45
BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 183 2e-45
BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 183 2e-45
AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 183 2e-45
BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 162 3e-39
M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 149 3e-35
M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 101 5e-25
M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 109 3e-23
BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. 92 4e-18
M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein. 50 3e-05
AL929554-11|CAH72880.1| 334|Homo sapiens leucine rich repeat co... 32 4.8
DQ355157-1|ABC79623.1| 334|Homo sapiens cytokeratin associated ... 31 8.5
>BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 191 bits (466), Expect = 5e-48
Identities = 102/153 (66%), Positives = 109/153 (71%), Gaps = 10/153 (6%)
Frame = +3
Query: 231 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 410
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 411 KDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLASSV 590
KDDGTVIHFNNPK QASL+ANTFAITGH E K I EMLPGILSQLG + L L++LA
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 591 -------AAPKPLD---EDDEVPNLVGNFDEAS 659
APKP D EDD+VP+LV NFDEAS
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEAS 153
>BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein.
Length = 158
Score = 191 bits (466), Expect = 5e-48
Identities = 102/153 (66%), Positives = 109/153 (71%), Gaps = 10/153 (6%)
Frame = +3
Query: 231 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 410
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 411 KDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLASSV 590
KDDGTVIHFNNPK QASL+ANTFAITGH E K I EMLPGILSQLG + L L++LA
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 591 -------AAPKPLD---EDDEVPNLVGNFDEAS 659
APKP D EDD+VP+LV NFDEAS
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEAS 153
>AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 191 bits (466), Expect = 5e-48
Identities = 102/153 (66%), Positives = 109/153 (71%), Gaps = 10/153 (6%)
Frame = +3
Query: 231 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 410
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 411 KDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLASSV 590
KDDGTVIHFNNPK QASL+ANTFAITGH E K I EMLPGILSQLG + L L++LA
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 591 -------AAPKPLD---EDDEVPNLVGNFDEAS 659
APKP D EDD+VP+LV NFDEAS
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEAS 153
>AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 191 bits (466), Expect = 5e-48
Identities = 102/153 (66%), Positives = 109/153 (71%), Gaps = 10/153 (6%)
Frame = +3
Query: 231 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 410
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 411 KDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLASSV 590
KDDGTVIHFNNPK QASL+ANTFAITGH E K I EMLPGILSQLG + L L++LA
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 591 -------AAPKPLD---EDDEVPNLVGNFDEAS 659
APKP D EDD+VP+LV NFDEAS
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEAS 153
>AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
TRANSCRIPTION FACTOR BTF3. ).
Length = 158
Score = 191 bits (466), Expect = 5e-48
Identities = 102/153 (66%), Positives = 109/153 (71%), Gaps = 10/153 (6%)
Frame = +3
Query: 231 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 410
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 411 KDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLASSV 590
KDDGTVIHFNNPK QASL+ANTFAITGH E K I EMLPGILSQLG + L L++LA
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 591 -------AAPKPLD---EDDEVPNLVGNFDEAS 659
APKP D EDD+VP+LV NFDEAS
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEAS 153
>X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3
protein.
Length = 162
Score = 183 bits (445), Expect = 2e-45
Identities = 98/153 (64%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
Frame = +3
Query: 228 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 407
IMN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNM
Sbjct: 5 IMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNM 64
Query: 408 IKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLA-- 581
+ GTVIHFNNPK QASLAANTF ITGH E KQ+ EMLP IL+QLG + L L+RLA
Sbjct: 65 FTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEA 124
Query: 582 ---SSVAAPKPL----DEDDEVPNLVGNFDEAS 659
SV PL D+DDEVP+LV NFDEAS
Sbjct: 125 LPKQSVDGKAPLATGEDDDDEVPDLVENFDEAS 157
>X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor
protein.
Length = 162
Score = 183 bits (445), Expect = 2e-45
Identities = 98/153 (64%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
Frame = +3
Query: 228 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 407
IMN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNM
Sbjct: 5 IMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNM 64
Query: 408 IKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLA-- 581
+ GTVIHFNNPK QASLAANTF ITGH E KQ+ EMLP IL+QLG + L L+RLA
Sbjct: 65 FTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEA 124
Query: 582 ---SSVAAPKPL----DEDDEVPNLVGNFDEAS 659
SV PL D+DDEVP+LV NFDEAS
Sbjct: 125 LPKQSVDGKAPLATGEDDDDEVPDLVENFDEAS 157
>X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor
protein.
Length = 206
Score = 183 bits (445), Expect = 2e-45
Identities = 98/153 (64%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
Frame = +3
Query: 228 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 407
IMN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNM
Sbjct: 49 IMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNM 108
Query: 408 IKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLA-- 581
+ GTVIHFNNPK QASLAANTF ITGH E KQ+ EMLP IL+QLG + L L+RLA
Sbjct: 109 FTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEA 168
Query: 582 ---SSVAAPKPL----DEDDEVPNLVGNFDEAS 659
SV PL D+DDEVP+LV NFDEAS
Sbjct: 169 LPKQSVDGKAPLATGEDDDDEVPDLVENFDEAS 201
>BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 183 bits (445), Expect = 2e-45
Identities = 98/153 (64%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
Frame = +3
Query: 228 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 407
IMN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNM
Sbjct: 5 IMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNM 64
Query: 408 IKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLA-- 581
+ GTVIHFNNPK QASLAANTF ITGH E KQ+ EMLP IL+QLG + L L+RLA
Sbjct: 65 FTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEA 124
Query: 582 ---SSVAAPKPL----DEDDEVPNLVGNFDEAS 659
SV PL D+DDEVP+LV NFDEAS
Sbjct: 125 LPKQSVDGKAPLATGEDDDDEVPDLVENFDEAS 157
>BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 183 bits (445), Expect = 2e-45
Identities = 98/153 (64%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
Frame = +3
Query: 228 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 407
IMN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNM
Sbjct: 5 IMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNM 64
Query: 408 IKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLA-- 581
+ GTVIHFNNPK QASLAANTF ITGH E KQ+ EMLP IL+QLG + L L+RLA
Sbjct: 65 FTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEA 124
Query: 582 ---SSVAAPKPL----DEDDEVPNLVGNFDEAS 659
SV PL D+DDEVP+LV NFDEAS
Sbjct: 125 LPKQSVDGKAPLATGEDDDDEVPDLVENFDEAS 157
>AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3
protein.
Length = 162
Score = 183 bits (445), Expect = 2e-45
Identities = 98/153 (64%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
Frame = +3
Query: 228 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 407
IMN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNM
Sbjct: 5 IMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNM 64
Query: 408 IKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLA-- 581
+ GTVIHFNNPK QASLAANTF ITGH E KQ+ EMLP IL+QLG + L L+RLA
Sbjct: 65 FTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEA 124
Query: 582 ---SSVAAPKPL----DEDDEVPNLVGNFDEAS 659
SV PL D+DDEVP+LV NFDEAS
Sbjct: 125 LPKQSVDGKAPLATGEDDDDEVPDLVENFDEAS 157
>BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein.
Length = 153
Score = 162 bits (394), Expect = 3e-39
Identities = 87/136 (63%), Positives = 94/136 (69%), Gaps = 10/136 (7%)
Frame = +3
Query: 282 KGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKDDGTVIHFNNPKAQAS 461
+GT RRKKKVVH TA DD VN I GIEEVNMIKDDGTVIHFNNPK QAS
Sbjct: 13 QGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQAS 72
Query: 462 LAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLASSV-------AAPKPLD--- 611
L+ANTFAITGH E K I EMLPGILSQLG + L L++LA APKP D
Sbjct: 73 LSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDE 132
Query: 612 EDDEVPNLVGNFDEAS 659
EDD+VP+LV NFDEAS
Sbjct: 133 EDDDVPDLVENFDEAS 148
>M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein.
Length = 214
Score = 149 bits (361), Expect = 3e-35
Identities = 81/140 (57%), Positives = 89/140 (63%), Gaps = 9/140 (6%)
Frame = +3
Query: 243 KLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKDDG 422
KL KLQ+QVRIGGKGT RKKKV H TA DD VN I GIE+VNM + G
Sbjct: 40 KLAKLQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQG 99
Query: 423 TVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRLA-----SS 587
TVIHFNNPK QASLA NTF ITGH E KQ+ EMLP +LSQLG + L L+RLA
Sbjct: 100 TVIHFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLRRLAEVLPKQP 159
Query: 588 VAAPKPL----DEDDEVPNL 635
V PL D+DD VP L
Sbjct: 160 VDGKAPLATGGDDDDGVPEL 179
>M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor
3a protein.
Length = 158
Score = 101 bits (241), Expect(2) = 5e-25
Identities = 56/95 (58%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Frame = +3
Query: 396 EVNMIKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKR 575
+VNM + GTVIHFNNPK QASLAANTF ITGH E KQ+ EMLP IL+QLG + L L+R
Sbjct: 67 KVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 126
Query: 576 LA-----SSVAAPKPL----DEDDEVPNLVGNFDE 653
LA SV PL D+DDEVP G F E
Sbjct: 127 LAEALPKQSVDGKAPLATGEDDDDEVP---GGFQE 158
Score = 35.1 bits (77), Expect(2) = 5e-25
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 228 IMNTEKLKKLQSQVRIGGK 284
IMN EKL KLQ+QVRIGGK
Sbjct: 49 IMNQEKLAKLQAQVRIGGK 67
>M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein.
Length = 111
Score = 109 bits (262), Expect = 3e-23
Identities = 60/102 (58%), Positives = 67/102 (65%)
Frame = +3
Query: 228 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 407
IMN +KL K Q++V G KGT RKK VVH TA +D VN IPGIEEVNM
Sbjct: 5 IMN-QKLTKRQAEVHTGRKGTAHRKK-VVHTTA--EDKKFQFSLKKLGVNNIPGIEEVNM 60
Query: 408 IKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGI 533
GTVIHFNNP+ QASLAANTF +TGH E KQ+ EML I
Sbjct: 61 FTHQGTVIHFNNPEVQASLAANTFTMTGHAETKQLTEMLLSI 102
>BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein.
Length = 102
Score = 92.3 bits (219), Expect = 4e-18
Identities = 51/97 (52%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Frame = +3
Query: 399 VNMIKDDGTVIHFNNPKAQASLAANTFAITGHGENKQIAEMLPGILSQLGPEGLNQLKRL 578
+N K T+IHFNNP+ QA LA NTF ITGHGE KQ+ EML +L+QL L L+RL
Sbjct: 1 MNQEKLQRTMIHFNNPEVQAFLAVNTFTITGHGETKQLTEMLRSVLNQLAAVSLTSLRRL 60
Query: 579 A-----SSVAAPKPL-----DEDDEVPNLVGNFDEAS 659
A SV PL D+DDEVP ++ NFDEAS
Sbjct: 61 AEALPKQSVDGKAPLATGEDDDDDEVPGIMENFDEAS 97
>M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein.
Length = 67
Score = 49.6 bits (113), Expect = 3e-05
Identities = 31/68 (45%), Positives = 38/68 (55%)
Frame = +3
Query: 228 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 407
IMN EKL KLQ++V IGG +KKVVH TA +D ++ GIEEVNM
Sbjct: 5 IMNQEKLAKLQAKVPIGGTA---HRKKVVHRTATANDKKRQFSLKKLEIS---GIEEVNM 58
Query: 408 IKDDGTVI 431
+ TVI
Sbjct: 59 FTNQATVI 66
>AL929554-11|CAH72880.1| 334|Homo sapiens leucine rich repeat
containing 26 protein.
Length = 334
Score = 32.3 bits (70), Expect = 4.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 550 GPNWLRIPGSISAICLFSPWPVMAKVFA-ASEA*AFGLLKC 431
GP+W R + + L SPWPV A+V A AS + + G C
Sbjct: 3 GPSWSRPRPLLLLLLLLSPWPVWAQVSATASPSGSLGAPDC 43
>DQ355157-1|ABC79623.1| 334|Homo sapiens cytokeratin associated
protein protein.
Length = 334
Score = 31.5 bits (68), Expect = 8.5
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 550 GPNWLRIPGSISAICLFSPWPVMAKVFA-ASEA*AFGLLKC 431
GP+W R + + L SPWPV A V A AS + + G C
Sbjct: 3 GPSWSRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDC 43
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,655,629
Number of Sequences: 237096
Number of extensions: 2914885
Number of successful extensions: 4356
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4340
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22800599744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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