Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_B05_e418_03.seq
         (1544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    30   0.061
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    25   2.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   3.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   5.3  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   7.1  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 29.9 bits (64), Expect = 0.061
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = -1

Query: 179 LLIYVVSLYCIGITYFLHINLPNLLYNLITYYF-----ILLPN 66
           ++IY +  Y  G+ Y+L   +  LLYN+++  F     ++LPN
Sbjct: 323 IIIYTILTYMSGVFYYLSTTVNPLLYNIMSNKFREAFKLMLPN 365


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
            channel protein.
          Length = 428

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 1470 PPRPXPPPP 1496
            PP+P PPPP
Sbjct: 338  PPKPAPPPP 346


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -3

Query: 591 HKPERYPDQRKTQSAILVNNVVLGSLLTPYKYHLF 487
           H  ++  DQ++  +   V+N V G  L+P  ++L+
Sbjct: 231 HNSDKMSDQQENLTLKEVDNKVYGMALSPVTHNLY 265


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 552 SAILVNNVVLGSLLTPYKYHLFLYKTFVFFF 460
           ++I+V++   G+ +  Y   +FL   F+ FF
Sbjct: 556 TSIIVDSSTSGATIVNYSIMIFLSAVFISFF 586


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
            acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 960  DSYLPTTXXILKNEXCPXVPPG 1025
            D   PT   +  N  C  VPPG
Sbjct: 121  DGTYPTNVVVKNNGTCLYVPPG 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,175
Number of Sequences: 438
Number of extensions: 7387
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 54190125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)