Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_B04_e410_04.seq
         (1596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   6.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   8.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
 Frame = -1

Query: 312 YC*YLFIILLPIGIYYNNSII----------VYKIITLRDTSICLYIIIAMFRYYFVHIP 163
           Y  Y FIILL +  +Y   II          +Y  +      +C+Y     F  + VH+ 
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLL 161

Query: 162 IVYFKFYQLPTYDIFSSRVVQIKSXIF 82
            +   ++    + IF+  ++   + IF
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLFCCAFIF 188


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 177 FVHIPIVYFKFYQLPTYDIF 118
           F ++P++ +  Y   TYD F
Sbjct: 327 FTYVPMILYCVYTTATYDSF 346


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 177 FVHIPIVYFKFYQLPTYDIF 118
           F ++P++ +  Y   TYD F
Sbjct: 52  FTYVPMILYCVYTTATYDSF 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,595
Number of Sequences: 336
Number of extensions: 3408
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 48242175
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)