Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_B01_e386_03.seq
         (1520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   3.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   5.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   5.9  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 197 AIVLRFDCRSEVSGSIPGS 253
           A+  R++C    +GSIPG+
Sbjct: 75  ALRFRYECEGRSAGSIPGA 93


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 99  FYQLLTYT*NLAAVSYYEYFFF 164
           FY++  YT N+ AVS   Y  +
Sbjct: 39  FYKIYKYTYNIVAVSLTAYMVY 60


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 737 DISSVKNMFYYSK*HAIT 790
           DI S+K  FY +K  AIT
Sbjct: 2   DIKSIKTCFYVAKFFAIT 19


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,905
Number of Sequences: 336
Number of extensions: 5166
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45681550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)