Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_A12_e473_02.seq
(1545 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 46 4e-04
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 46 4e-04
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 46 4e-04
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 46 4e-04
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 46 4e-04
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 46 4e-04
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 46 4e-04
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 46 4e-04
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 46 4e-04
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 46 5e-04
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 45 7e-04
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 45 7e-04
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 45 7e-04
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 46.0 bits (104), Expect = 4e-04
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 84 QPAVSRSRXLANRGIMTSETVYSVSPKAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQI 263
+P SR+ L RGI S KA +R Y + + K +ATV K +
Sbjct: 41 KPHCSRNPVLV-RGIGRYSRSAMYSRKA--MYKRKYSAAKSKVEKKKKEKVLATVT-KPV 96
Query: 264 EGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXXGKSS-SKHVRR 386
G+KNGGTR V L+ +YPT+D R GK S+HVR+
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 46.0 bits (104), Expect = 4e-04
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 84 QPAVSRSRXLANRGIMTSETVYSVSPKAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQI 263
+P SR+ L RGI S KA +R Y + + K +ATV K +
Sbjct: 41 KPHCSRNPVLV-RGIGRYSRSAMYSRKA--MYKRKYSAAKSKVEKKKKEKVLATVT-KPV 96
Query: 264 EGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXXGKSS-SKHVRR 386
G+KNGGTR V L+ +YPT+D R GK S+HVR+
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 46.0 bits (104), Expect = 4e-04
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 84 QPAVSRSRXLANRGIMTSETVYSVSPKAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQI 263
+P SR+ L RGI S KA +R Y + + K +ATV K +
Sbjct: 41 KPHCSRNPVLV-RGIGRYSRSAMYSRKA--MYKRKYSAAKSKVEKKKKEKVLATVT-KPV 96
Query: 264 EGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXXGKSS-SKHVRR 386
G+KNGGTR V L+ +YPT+D R GK S+HVR+
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 46.0 bits (104), Expect = 4e-04
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 84 QPAVSRSRXLANRGIMTSETVYSVSPKAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQI 263
+P SR+ L RGI S KA +R Y + + K +ATV K +
Sbjct: 41 KPHCSRNPVLV-RGIGRYSRSAMYSRKA--MYKRKYSAAKSKVEKKKKEKVLATVT-KPV 96
Query: 264 EGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXXGKSS-SKHVRR 386
G+KNGGTR V L+ +YPT+D R GK S+HVR+
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 46.0 bits (104), Expect = 4e-04
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 84 QPAVSRSRXLANRGIMTSETVYSVSPKAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQI 263
+P SR+ L RGI S KA +R Y + + K +ATV K +
Sbjct: 41 KPHCSRNPVLV-RGIGRYSRSAMYSRKA--MYKRKYSAAKSKVEKKKKEKVLATVT-KPV 96
Query: 264 EGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXXGKSS-SKHVRR 386
G+KNGGTR V L+ +YPT+D R GK S+HVR+
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 46.0 bits (104), Expect = 4e-04
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 84 QPAVSRSRXLANRGIMTSETVYSVSPKAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQI 263
+P SR+ L RGI S KA +R Y + + K +ATV K +
Sbjct: 41 KPHCSRNPVLV-RGIGRYSRSAMYSRKA--MYKRKYSAAKSKVEKKKKEKVLATVT-KPV 96
Query: 264 EGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXXGKSS-SKHVRR 386
G+KNGGTR V L+ +YPT+D R GK S+HVR+
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 46.0 bits (104), Expect = 4e-04
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 84 QPAVSRSRXLANRGIMTSETVYSVSPKAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQI 263
+P SR+ L RGI S KA +R Y + + K +ATV K +
Sbjct: 41 KPHCSRNPVLV-RGIGRYSRSAMYSRKA--MYKRKYSAAKSKVEKKKKEKVLATVT-KPV 96
Query: 264 EGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXXGKSS-SKHVRR 386
G+KNGGTR V L+ +YPT+D R GK S+HVR+
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 46.0 bits (104), Expect = 4e-04
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 84 QPAVSRSRXLANRGIMTSETVYSVSPKAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQI 263
+P SR+ L RGI S KA +R Y + + K +ATV K +
Sbjct: 41 KPHCSRNPVLV-RGIGRYSRSAMYSRKA--MYKRKYSAAKSKVEKKKKEKVLATVT-KPV 96
Query: 264 EGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXXGKSS-SKHVRR 386
G+KNGGTR V L+ +YPT+D R GK S+HVR+
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 46.0 bits (104), Expect = 4e-04
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 84 QPAVSRSRXLANRGIMTSETVYSVSPKAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQI 263
+P SR+ L RGI S KA +R Y + + K +ATV K +
Sbjct: 41 KPHCSRNPVLV-RGIGRYSRSAMYSRKA--MYKRKYSAAKSKVEKKKKEKVLATVT-KPV 96
Query: 264 EGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXXGKSS-SKHVRR 386
G+KNGGTR V L+ +YPT+D R GK S+HVR+
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 45.6 bits (103), Expect = 5e-04
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 84 QPAVSRSRXLANRGIMTSETVYSVSPKAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQI 263
+P SR+ L RG+ S KA +R Y + + K +ATV K +
Sbjct: 41 KPHCSRNPVLV-RGVGRYSRSAMYSRKA--MYKRKYSAAKSKVEKKKKEKVLATVT-KPV 96
Query: 264 EGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXXGKSS-SKHVRR 386
G+KNGGTR V L+ +YPT+D R GK S+HVR+
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 45.2 bits (102), Expect = 7e-04
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 180 RRLYIXLSXRRTRXLKSPXIATVXXKQIEGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXX 356
+R Y + + K +ATV K + G+KNGGTR V L+ +YPT+D R
Sbjct: 70 KRKYSAAKSKVEKKKKEKVLATVT-KPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSH 128
Query: 357 GKSS-SKHVRR 386
GK S+HVR+
Sbjct: 129 GKKPFSQHVRK 139
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 45.2 bits (102), Expect = 7e-04
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 180 RRLYIXLSXRRTRXLKSPXIATVXXKQIEGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXX 356
+R Y + + K +ATV K + G+KNGGTR V L+ +YPT+D R
Sbjct: 9 KRKYSAAKSKVEKKKKEKVLATVT-KPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSH 67
Query: 357 GKSS-SKHVRR 386
GK S+HVR+
Sbjct: 68 GKKPFSQHVRK 78
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 45.2 bits (102), Expect = 7e-04
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 180 RRLYIXLSXRRTRXLKSPXIATVXXKQIEGEKNGGTRTVLLKSXKSFYPTQDKIR-XRXX 356
+R Y + + K +ATV K + G+KNGGTR V L+ +YPT+D R
Sbjct: 70 KRKYSAAKSKVEKKKKEKVLATVT-KPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSH 128
Query: 357 GKSS-SKHVRR 386
GK S+HVR+
Sbjct: 129 GKKPFSQHVRK 139
Score = 33.1 bits (72), Expect = 2.8
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 98 KKQXVGKP---RNYDLGNGVLRFSKSRMYHKKAIYK 196
KK GKP RN L G+ R+S+S MY +KA+YK
Sbjct: 35 KKPKKGKPHCGRNPVLVRGIGRYSRSAMYSRKAMYK 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,246,955
Number of Sequences: 237096
Number of extensions: 1264213
Number of successful extensions: 1975
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1932
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23074645414
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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