Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_A12_e473_02.seq
         (1545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...    51   5e-06
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...    51   5e-06
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...    42   0.003

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score = 50.8 bits (116), Expect = 5e-06
 Identities = 47/165 (28%), Positives = 63/165 (38%), Gaps = 2/165 (1%)
 Frame = +2

Query: 71  PXXXAAGGVKKQXVGK--PRNYDLGNGVLRFSKSRMYHKKAIYKXVGKKNPXAEKPXXXX 244
           P   A    K    GK  P N  L  G+LR+SK++MY ++A+Y+   KK+P  EK     
Sbjct: 3   PIEKAKKVAKSAKKGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPI 62

Query: 245 XXXXXXXXXKEWRHSYSPAEKXEIILPHSGQDQGSXXWQEFX*TCA*DADLTSLPXQCAF 424
                    K         +K +   P     +       F      +      P     
Sbjct: 63  KKVKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFS-EHKRNTRRNLTPGTVLI 121

Query: 425 XWXGRHXXKRVVLXGVXAXXTATLRWTFLLFNACXLRRIPXXYVI 559
              GRH  KRVVL  V A     +   F L N+C LRR+   YVI
Sbjct: 122 LLAGRHQGKRVVLLKVLASGLLLVTGPFAL-NSCPLRRVSQRYVI 165



 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 26/76 (34%), Positives = 39/76 (51%)
 Frame = +3

Query: 162 KAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQIEGEKNGGTRTVLLKSXKSFYPTQDKI 341
           KA    RR    L  +++  ++   +     K+I G KNGG RTV LK  K+ YPT+  +
Sbjct: 35  KAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLKKSKASYPTKTFV 94

Query: 342 RXRXXGKSSSKHVRRT 389
           + R    + S+H R T
Sbjct: 95  KKRPSKANFSEHKRNT 110


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score = 50.8 bits (116), Expect = 5e-06
 Identities = 47/165 (28%), Positives = 63/165 (38%), Gaps = 2/165 (1%)
 Frame = +2

Query: 71  PXXXAAGGVKKQXVGK--PRNYDLGNGVLRFSKSRMYHKKAIYKXVGKKNPXAEKPXXXX 244
           P   A    K    GK  P N  L  G+LR+SK++MY ++A+Y+   KK+P  EK     
Sbjct: 3   PIEKAKKVAKSAKKGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPI 62

Query: 245 XXXXXXXXXKEWRHSYSPAEKXEIILPHSGQDQGSXXWQEFX*TCA*DADLTSLPXQCAF 424
                    K         +K +   P     +       F      +      P     
Sbjct: 63  KKVKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFS-EHKRNTRRNLTPGTVLI 121

Query: 425 XWXGRHXXKRVVLXGVXAXXTATLRWTFLLFNACXLRRIPXXYVI 559
              GRH  KRVVL  V A     +   F L N+C LRR+   YVI
Sbjct: 122 LLAGRHQGKRVVLLKVLASGLLLVTGPFAL-NSCPLRRVSQRYVI 165



 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 26/76 (34%), Positives = 39/76 (51%)
 Frame = +3

Query: 162 KAGCTTRRLYIXLSXRRTRXLKSPXIATVXXKQIEGEKNGGTRTVLLKSXKSFYPTQDKI 341
           KA    RR    L  +++  ++   +     K+I G KNGG RTV LK  K+ YPT+  +
Sbjct: 35  KAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLKKSKASYPTKTFV 94

Query: 342 RXRXXGKSSSKHVRRT 389
           + R    + S+H R T
Sbjct: 95  KKRPSKANFSEHKRNT 110


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +2

Query: 71  PXXXAAGGVKKQXVGK--PRNYDLGNGVLRFSKSRMYHKKAIYKXVGKKNPXAEK 229
           P   A    K    GK  P N  L  G+LR+SK++MY ++A+Y+   KK+P  EK
Sbjct: 3   PIEKAKKVAKSAKKGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEK 57



 Score = 35.1 bits (77), Expect = 0.26
 Identities = 20/42 (47%), Positives = 23/42 (54%)
 Frame = +2

Query: 434 GRHXXKRVVLXGVXAXXTATLRWTFLLFNACXLRRIPXXYVI 559
           GRH  KRVVL  V A     +   F L N+C LRR+   YVI
Sbjct: 106 GRHQGKRVVLLKVLASGLLLVTGPFAL-NSCPLRRVSQRYVI 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,128,841
Number of Sequences: 53049
Number of extensions: 347045
Number of successful extensions: 519
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8656343856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)