Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_A11_e465_01.seq
(1548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 42 0.001
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 38 0.022
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.022
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 35 0.15
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.20
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 35 0.20
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 34 0.27
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.35
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.35
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 34 0.35
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.46
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.61
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 33 0.81
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.81
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.81
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 32 1.1
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 32 1.1
SB_39538| Best HMM Match : VWA (HMM E-Value=0) 32 1.4
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 32 1.4
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 31 2.5
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 31 2.5
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 31 2.5
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1) 31 3.3
SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 4.3
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_17493| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 4.3
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 30 4.3
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.7
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 30 5.7
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 29 7.6
SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14) 29 7.6
SB_12790| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
SB_1089| Best HMM Match : AbfB (HMM E-Value=0.034) 29 7.6
SB_50275| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3) 29 7.6
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 10.0
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 29 10.0
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 41.9 bits (94), Expect = 0.001
Identities = 37/133 (27%), Positives = 40/133 (30%), Gaps = 4/133 (3%)
Frame = +1
Query: 1156 GPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXANPXSRXXXPRRXRGG 1335
GP P PGPP +G GP P +G P +G
Sbjct: 626 GPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGESGPAGNAGGVGYQGNHGNPAGVQGP 685
Query: 1336 RXXAGPP----PXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXG 1503
GPP P GE G G P P PP P P G P G P G
Sbjct: 686 NGQPGPPGINGPPGQIGEMGPPGLPGPPGPASPPSPPGPPGPPG--PNGPP--GPNGPLG 741
Query: 1504 XPGXXXPGPPXXG 1542
PG P G
Sbjct: 742 PPGECGPAGNAGG 754
Score = 41.1 bits (92), Expect = 0.002
Identities = 36/131 (27%), Positives = 39/131 (29%), Gaps = 2/131 (1%)
Frame = +1
Query: 1156 GPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXANPXSRXXXPRRXRGG 1335
GP P PGPP G GP P G P +G
Sbjct: 711 GPPGPASPPSPPGPPGPPGPNGPPGPNGPLGPPGECGPAGNAGGVGCQGHHGNPAGSQGP 770
Query: 1336 RXXAGPPPXXX-FGEXGXRGAPPXTXPXGGXPRGAPPXPXXXT-PXGXPXGGXXPPXGXP 1509
GPP G+ G G P P G +PP P P G P G P G P
Sbjct: 771 NGQPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKGPP--GPNGPLGPP 828
Query: 1510 GXXXPGPPXXG 1542
G P G
Sbjct: 829 GECGPAGNAGG 839
Score = 39.5 bits (88), Expect = 0.007
Identities = 34/119 (28%), Positives = 36/119 (30%), Gaps = 5/119 (4%)
Frame = +1
Query: 1156 GPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXANPXSRXXXPRRXRGG 1335
GP P PGPP +G GP P G P +G
Sbjct: 796 GPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGECGPAGNAGGVGCQGNHGNPAGSQGP 855
Query: 1336 RXXAGPP----PXXXFGEXGXRGAPPXTXPXG-GXPRGAPPXPXXXTPXGXPXGGXXPP 1497
GPP P GE G G P P P G P P P G P G PP
Sbjct: 856 NGQPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKGPPG-PNGCLGPP 913
Score = 38.7 bits (86), Expect = 0.012
Identities = 38/126 (30%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Frame = +1
Query: 1177 PKXXPGPPXXARXRG-GGGPXFXXPV--PXGAGFRAQXXXANPXSRXXXPRRXRGGRXXA 1347
P+ PGPP G G P P+ P AG P +G
Sbjct: 460 PQMPPGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQP 519
Query: 1348 GPP----PXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGX 1515
GPP P G+ G G P P P G P P P G P G P G PG
Sbjct: 520 GPPGINGPPGPLGDVGPPGLPGPPGPQ--MPPGPPGLPGAPGPNGPP--GINGPLGPPGE 575
Query: 1516 XXPGPP 1533
GPP
Sbjct: 576 A--GPP 579
Score = 37.9 bits (84), Expect = 0.022
Identities = 37/129 (28%), Positives = 40/129 (31%), Gaps = 7/129 (5%)
Frame = +1
Query: 1177 PKXXPGPPXXARXRGGGGP-XFXXPV--PXGAGFRAQXXXANPXSRXXXPRRXRGGRXXA 1347
P+ PGPP G GP P+ P AG P +G
Sbjct: 545 PQMPPGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQP 604
Query: 1348 GPP----PXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGX 1515
GPP P GE G G P P PP P P G P G P G PG
Sbjct: 605 GPPGVNGPPGEIGEIGPAGLPGPPGPASPPSPPGPPGPPG--PKGPP--GPNGPLGPPGE 660
Query: 1516 XXPGPPXXG 1542
P G
Sbjct: 661 SGPAGNAGG 669
Score = 34.7 bits (76), Expect = 0.20
Identities = 27/68 (39%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Frame = +1
Query: 1345 AGPPPXXXFGEXGXRGAPPXTXPXG--GXP--RGAPPXPXXXTPXGXPXGGXXPPXGXPG 1512
A PPP G G G P P G G P G P P P G P G PP G PG
Sbjct: 37 APPPPPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAIGPP-GLPG 95
Query: 1513 -XXXPGPP 1533
GPP
Sbjct: 96 PNGVNGPP 103
Score = 33.9 bits (74), Expect = 0.35
Identities = 45/155 (29%), Positives = 47/155 (30%), Gaps = 14/155 (9%)
Frame = +1
Query: 1111 PPSYREFPDRPCLGXGPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGF-RAQXXX 1287
PP ++ P P GP P GPP G GP P P G
Sbjct: 74 PPGFQGPPGNPAGAIGPPGLPGPNGVNGPPGELGDMGPPGP----PGPPGPQMPPGPPGL 129
Query: 1288 ANPXSRXXXP--RRXRGGRXXAGPPPX-XXFGEXGXRGAP-----PXTXPXGGXPRGAPP 1443
P P G GPP G G G P P P P G P
Sbjct: 130 PGPPGPAGPPGTNGELGPPGDVGPPGNPGGPGLQGNHGNPAGIQGPNGLPGPNGPLGPPG 189
Query: 1444 XPXXXTPXG--XPXGGXXPPX--GXPGXXXP-GPP 1533
P P G P G PP G PG P GPP
Sbjct: 190 PPGDMGPPGLPGPQGPQMPPGPPGLPGAPGPKGPP 224
Score = 31.1 bits (67), Expect = 2.5
Identities = 47/155 (30%), Positives = 47/155 (30%), Gaps = 14/155 (9%)
Frame = +1
Query: 1111 PPSYREFPDRPCLGXGPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXA 1290
PP PD P GP PK PG P G P F P AG
Sbjct: 40 PPPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPP-----GPPGFQGPPGNPAGAIGPPGLP 94
Query: 1291 NPXSRXXXPRR--XRGGRXXAGPP-PXXXFGEXGXRG-----APPXTX-----PXGGXPR 1431
P P G GPP P G G G PP T P P
Sbjct: 95 GPNGVNGPPGELGDMGPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNGELGPPGDVGPP 154
Query: 1432 GAPPXPXXXTPXGXPXGGXXPPXGXPGXXXP-GPP 1533
G P P G P G P G PG P GPP
Sbjct: 155 GNPGGPGLQGNHGNP-AGIQGPNGLPGPNGPLGPP 188
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 37.9 bits (84), Expect = 0.022
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +1
Query: 1399 PXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPG 1527
P G P GAPP P P G P G PP G P PG
Sbjct: 228 PPVGMLGHPPMGAPPPPHSMPPPGMPPPGMMPPPGFPPMGMPG 270
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 1396 PPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPG--PP 1533
PP + P G P P P G P G PP G P PG PP
Sbjct: 243 PPHSMPPPGMPPPGMMPPPGFPPMGMPGMGGMPPPGMPPPMPPGGMPP 290
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 37.9 bits (84), Expect = 0.022
Identities = 39/126 (30%), Positives = 44/126 (34%), Gaps = 9/126 (7%)
Frame = +1
Query: 1192 GPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXANPXSRXXXPRRXRGGRXXAGPPPXXXF 1371
GPP +GGG P P G G+ A P +GG GPPP
Sbjct: 502 GPPPPGAGQGGGPP----PPGAGQGWGQPPPGAGQGGGPPPPGAGQGG----GPPPPGA- 552
Query: 1372 GEXGXRGAPPXTXPXGGXP-----RGAPPXPXXXT----PXGXPXGGXXPPXGXPGXXXP 1524
G+ G PP GG P +G PP P P G GG PP G
Sbjct: 553 GQ-GWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAGQGWGL 611
Query: 1525 GPPXXG 1542
PP G
Sbjct: 612 PPPGSG 617
Score = 35.1 bits (77), Expect = 0.15
Identities = 23/71 (32%), Positives = 25/71 (35%)
Frame = +1
Query: 1330 GGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXP 1509
GG+ PPP G+ G PP GG P P G GG PP G
Sbjct: 486 GGQGWGQPPPGA--GQGGGP-PPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAG 542
Query: 1510 GXXXPGPPXXG 1542
P PP G
Sbjct: 543 QGGGPPPPGAG 553
Score = 34.7 bits (76), Expect = 0.20
Identities = 24/62 (38%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -2
Query: 1529 GPGXXXPGXPXGGXXPPXGXPXGVXXXGXG-GAPRGXPPXGXVXGGAPLXPXSPNXXXGG 1353
G G PG GG PP G G G G G PP G GG P P GG
Sbjct: 489 GWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGG---PPPPGAGQGG 545
Query: 1352 GP 1347
GP
Sbjct: 546 GP 547
Score = 34.3 bits (75), Expect = 0.27
Identities = 27/73 (36%), Positives = 27/73 (36%), Gaps = 8/73 (10%)
Frame = -2
Query: 1541 PXXG-GPGXXXPGXPXGGXXPPXGXPXGVXXXGXG-GAPRGXPPXGXVXGGAP------L 1386
P G G G PG GG PP G G G G G PP G GG P
Sbjct: 528 PGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQE 587
Query: 1385 XPXSPNXXXGGGP 1347
P P GGGP
Sbjct: 588 GPPPPGAGQGGGP 600
Score = 33.9 bits (74), Expect = 0.35
Identities = 27/75 (36%), Positives = 28/75 (37%), Gaps = 10/75 (13%)
Frame = -2
Query: 1541 PXXG-GPGXXXPGXPXGGXXPPXGXPXGVXXXGXG-GAPRGXPPXGXVXGGAPLXPXS-- 1374
P G G G PG GG PP G G G G G PP G GG P P +
Sbjct: 495 PGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQ 554
Query: 1373 ------PNXXXGGGP 1347
P GGGP
Sbjct: 555 GWGQPPPGAGQGGGP 569
Score = 31.5 bits (68), Expect = 1.9
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = -2
Query: 1541 PXXG-GPGXXXPGXPXGGXXPPXGXPXGVXXXGXGGAPRGXPPXGXVXGGAPLXP 1380
P G G G PG GG PP G G G G PP G GG P P
Sbjct: 550 PGAGQGWGQPPPGAGQGGGPPPPGAGQG-GPPPPGAGQEGPPPPGAGQGGGPPPP 603
Score = 29.9 bits (64), Expect = 5.7
Identities = 22/71 (30%), Positives = 23/71 (32%)
Frame = +1
Query: 1330 GGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXP 1509
G GPPP G+ G P G P GA P GG PP
Sbjct: 496 GAGQGGGPPPPGA-GQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQ 554
Query: 1510 GXXXPGPPXXG 1542
G P PP G
Sbjct: 555 GWGQP-PPGAG 564
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1440 GGPPGXAXPGXGXGGXAPXAXFPEXXXGRGPGXGXAPP 1327
GGPP PG G GG P E G G G PP
Sbjct: 567 GGPPP---PGAGQGGPPPPGAGQEGPPPPGAGQGGGPP 601
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 35.1 bits (77), Expect = 0.15
Identities = 38/147 (25%), Positives = 44/147 (29%), Gaps = 7/147 (4%)
Frame = +1
Query: 1114 PSYREFPDRPCLGXGPXQXXLPKXXPG--PPX--XARXRGGGGPXFXXPVPXGAGFRAQX 1281
P ++ P G P P PG PP +GG P P P + Q
Sbjct: 102 PPLQQRQQHPPPGHPPMGGGYPGQQPGGPPPSYDSTMQQGGSYPPGQQPYPGQQAYPGQP 161
Query: 1282 XXA---NPXSRXXXPRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPX 1452
+ P P+ G PP G P G P G PP
Sbjct: 162 GASPQGQPYPGQSYPQGQEPYPEKGGYPPAGVGQHSGPYPGQPGMW--GPPPMGGPP--- 216
Query: 1453 XXTPXGXPXGGXXPPXGXPGXXXPGPP 1533
P G P GG PP PG P P
Sbjct: 217 ---PMGGPPGGYPPPPPPPGAGDPAYP 240
Score = 30.3 bits (65), Expect = 4.3
Identities = 33/123 (26%), Positives = 40/123 (32%), Gaps = 7/123 (5%)
Frame = +1
Query: 1195 PPXXARXRGGGGPXFX--XPVPXGAGFRAQXXXANPXSRXXXPRRXRGGRXXAGPPPXXX 1368
PP GGG P P P Q P + ++ G+ A P
Sbjct: 111 PPPGHPPMGGGYPGQQPGGPPPSYDSTMQQGGSYPPGQQPYPGQQAYPGQPGASPQGQPY 170
Query: 1369 FGEXGXRGAPPXTXPXGGXPRG----APPXPXXXTPXGXPXGGXXPPXGXP-GXXXPGPP 1533
G+ +G P G P G + P P G P G PP G P G P PP
Sbjct: 171 PGQSYPQGQEPYPEKGGYPPAGVGQHSGPYPGQPGMWGPPPMGGPPPMGGPPGGYPPPPP 230
Query: 1534 XXG 1542
G
Sbjct: 231 PPG 233
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 34.7 bits (76), Expect = 0.20
Identities = 22/57 (38%), Positives = 22/57 (38%)
Frame = -2
Query: 1541 PXXGGPGXXXPGXPXGGXXPPXGXPXGVXXXGXGGAPRGXPPXGXVXGGAPLXPXSP 1371
P GG P P G PP P G GGAP PP G G AP P P
Sbjct: 935 PPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPG---GSAPPPPPPP 988
Score = 34.3 bits (75), Expect = 0.27
Identities = 21/61 (34%), Positives = 21/61 (34%)
Frame = +1
Query: 1351 PPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGP 1530
PPP G PP P G P PP P P GG PP G P P
Sbjct: 920 PPPPPPPGGNAPLPPPP---PGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPP 976
Query: 1531 P 1533
P
Sbjct: 977 P 977
Score = 33.5 bits (73), Expect = 0.46
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +1
Query: 1315 PRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXP 1494
PRR G G PP P G P PP P GG P
Sbjct: 894 PRRNESPSQTPGGSESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAP 953
Query: 1495 PXGXPGXXXPGPPXXG 1542
P P PP G
Sbjct: 954 PPPPPPGGSAPPPGGG 969
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/100 (27%), Positives = 28/100 (28%)
Frame = +1
Query: 1150 GXGPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXANPXSRXXXPRRXR 1329
G P + P PG GG P P G A P
Sbjct: 891 GSFPRRNESPSQTPGGSESPSASPPGGSVPPPPPPPGGN--APLPPPPPGGSAPSQPPPP 948
Query: 1330 GGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXP 1449
GG PPP GAPP P GG PP P
Sbjct: 949 GGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPP 988
Score = 32.7 bits (71), Expect = 0.81
Identities = 23/68 (33%), Positives = 23/68 (33%)
Frame = +1
Query: 1330 GGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXP 1509
GG PPP AP P GG PP P P P GG P P
Sbjct: 927 GGNAPLPPPPPGG-------SAPSQPPPPGGNAPPPPPPPGGSAP--PPGGGAPPLPPPP 977
Query: 1510 GXXXPGPP 1533
G P PP
Sbjct: 978 GGSAPPPP 985
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 1328 GGAXPXPGPRPXXXSGNXAXGAXPPXPXPGXAXPGGPP 1441
GG P P P P + GA P P PG + P PP
Sbjct: 949 GGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPP 986
Score = 31.5 bits (68), Expect = 1.9
Identities = 25/79 (31%), Positives = 26/79 (32%)
Frame = +1
Query: 1294 PXSRXXXPRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGX 1473
P P GG + PPP APP P GG APP P
Sbjct: 926 PGGNAPLPPPPPGGSAPSQPPPPGG-------NAPPPPPPPGGS---APPPGGGAPPLPP 975
Query: 1474 PXGGXXPPXGXPGXXXPGP 1530
P GG PP P P P
Sbjct: 976 PPGGSAPPPPPPPPPPPPP 994
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 34.7 bits (76), Expect = 0.20
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = +1
Query: 1396 PPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGPPXXG 1542
PP P GG GAPP P P P G PP G P PP G
Sbjct: 662 PPPPPPPGGQAGGAPPPP----PPPLPGGAAPPPPPPIGGGAPPPPPPG 706
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +2
Query: 1346 PGPRPXXXSGNXAXGAXPPXP--XPGXAXPGGPP 1441
P P P G A GA PP P PG A P PP
Sbjct: 660 PPPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPP 693
Score = 29.5 bits (63), Expect = 7.6
Identities = 23/54 (42%), Positives = 24/54 (44%)
Frame = +1
Query: 1351 PPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPG 1512
PPP G+ G GAPP P P GA P P P P GG PP PG
Sbjct: 663 PPPPPPGGQAG--GAPPPPPP--PLPGGAAPPP---PP---PIGGGAPPPPPPG 706
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 34.3 bits (75), Expect = 0.27
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = +1
Query: 1348 GPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPG 1527
GPP +G PP P G PP P P G P P G PG PG
Sbjct: 346 GPPGNMSMPNHRPQGLPPGMPPMALSLPGMPP-PGLLPPPGMPPRLPIPGLGLPGMPLPG 404
Query: 1528 PP 1533
P
Sbjct: 405 MP 406
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 33.9 bits (74), Expect = 0.35
Identities = 27/68 (39%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Frame = +1
Query: 1345 AGPP-PXXXFGEXGXRGAPPXTXPXG--GXPRGAPPXPXXXTPXGXPXGGXXPPX-GXPG 1512
AGPP P GE G GAP P G G P G P G P P G PG
Sbjct: 102 AGPPGPPGHVGEDGAPGAPGAPGPPGSPGAP-GLPGEKGDPGLQGAPGAAGLPGAPGLPG 160
Query: 1513 XXXP-GPP 1533
P GPP
Sbjct: 161 PQGPMGPP 168
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 33.9 bits (74), Expect = 0.35
Identities = 41/145 (28%), Positives = 41/145 (28%)
Frame = +1
Query: 1108 FPPSYREFPDRPCLGXGPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXX 1287
FPP P P G P P P P R G P P P R
Sbjct: 441 FPPPGAPHPRVPPPGA-PHPRVPPPGAPHP----RVPPPGAPHPRVPPPGAPHPRVPPPG 495
Query: 1288 ANPXSRXXXPRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPX 1467
A P R P G PPP GAP P G P P P P
Sbjct: 496 A-PHQRVPPP----GAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPR 550
Query: 1468 GXPXGGXXPPXGXPGXXXPGPPXXG 1542
P G P PG P P G
Sbjct: 551 VPPPGASHPRVPPPGAPHPRVPPPG 575
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 1351 PPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGP 1530
PPP GAP P G P P P P P G P PG P
Sbjct: 522 PPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPRV 581
Query: 1531 PXXG 1542
P G
Sbjct: 582 PPPG 585
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 1351 PPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGP 1530
PPP GAP P G P P P P P G P PG P
Sbjct: 412 PPPGASHQRVRPPGAPHPRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRV 471
Query: 1531 PXXG 1542
P G
Sbjct: 472 PPPG 475
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 1351 PPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGP 1530
PPP GAP P G P P P P P G P PG P
Sbjct: 432 PPPGAPHPRFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRV 491
Query: 1531 PXXG 1542
P G
Sbjct: 492 PPPG 495
Score = 31.5 bits (68), Expect = 1.9
Identities = 40/144 (27%), Positives = 40/144 (27%)
Frame = +1
Query: 1111 PPSYREFPDRPCLGXGPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXA 1290
PP P P G P Q P P P R G P P P R A
Sbjct: 482 PPPGAPHPRVPPPGA-PHQRVPPPGAPHP----RVPPPGAPHPRVPPPGAPHPRVPPPGA 536
Query: 1291 NPXSRXXXPRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXG 1470
P R P G PPP GAP P G P P P P
Sbjct: 537 -PHPRVPPP----GAPHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPRVPPPGTPHPRV 591
Query: 1471 XPXGGXXPPXGXPGXXXPGPPXXG 1542
P G P PG P G
Sbjct: 592 PPPGAPHPKVPPPGAPYQRLPYSG 615
Score = 29.9 bits (64), Expect = 5.7
Identities = 37/129 (28%), Positives = 38/129 (29%)
Frame = +1
Query: 1156 GPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXANPXSRXXXPRRXRGG 1335
GP LP PG P AR G P P + R A P R P G
Sbjct: 366 GPYTRALP---PGEPY-ARMPPPGATHPRVPSPGASHPRVPPPGA-PHPRVPPP----GA 416
Query: 1336 RXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGX 1515
PP GAP P G P P P P P G P PG
Sbjct: 417 SHQRVRPPGAPHPRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGA 476
Query: 1516 XXPGPPXXG 1542
P P G
Sbjct: 477 PHPRVPPPG 485
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.9 bits (74), Expect = 0.35
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +1
Query: 1345 AGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPP-XPXXXTPX-GXPXGGXXPPXGXPGXX 1518
A PPP G PP P G P PP P P P PP G
Sbjct: 137 APPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPP 196
Query: 1519 XPGPP 1533
P PP
Sbjct: 197 PPPPP 201
Score = 29.9 bits (64), Expect = 5.7
Identities = 22/80 (27%), Positives = 24/80 (30%)
Frame = +1
Query: 1291 NPXSRXXXPRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXG 1470
+P +R P PPP G PP P P AP P
Sbjct: 132 SPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVP--APAVPLAAASPP 189
Query: 1471 XPXGGXXPPXGXPGXXXPGP 1530
P GG PP P P P
Sbjct: 190 PPSGGPPPPPPPPPPPPPPP 209
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +1
Query: 1351 PPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGP 1530
PPP E + P P R PP P G P PP P P P
Sbjct: 110 PPPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGP---PPPPPIAPATGGPPP 166
Query: 1531 P 1533
P
Sbjct: 167 P 167
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 33.5 bits (73), Expect = 0.46
Identities = 23/72 (31%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +1
Query: 1333 GRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXP- 1509
G+ G + + AP GG PRG PP G P G PP P
Sbjct: 44 GKEIFGRALNIEYAQEKESSAPRRGGYGGGPPRG-PPRGHPMRGRGAPYGRGGPPSRGPP 102
Query: 1510 -GXXXPGPPXXG 1542
G PGPP G
Sbjct: 103 RGPPLPGPPRRG 114
Score = 29.9 bits (64), Expect = 5.7
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = -2
Query: 1541 PXXGGPGXXXP-GXPXGGXXPPXGXPXGVXXXGXGGAPRGXPPXGXVXGGAPLX---PXS 1374
P GG G P G P G G P G GG P PP G G P P
Sbjct: 65 PRRGGYGGGPPRGPPRGHPMRGRGAPYG-----RGGPPSRGPPRGPPLPGPPRRGPPPDR 119
Query: 1373 PNXXXGGGPAXXRPPRXR 1320
+ G G RPP R
Sbjct: 120 DSGYGGYGDRYDRPPPDR 137
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 1396 PPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGPP 1533
PP P AP P P G P PP G P P PP
Sbjct: 161 PPQPPAPPAAPFMAPAAPPAPPPPGAPAAPPAPPFGGPPSAPPPPP 206
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 32.7 bits (71), Expect = 0.81
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +2
Query: 1382 AXGAXPPXPXPGXAXPGGPPLXXXXXPXGXXRXGXXP 1492
A GA PP G A PGGPPL P G G P
Sbjct: 803 ARGAPPPG---GRAAPGGPPLRGGMAPRGAVPRGMAP 836
Score = 31.1 bits (67), Expect = 2.5
Identities = 38/136 (27%), Positives = 40/136 (29%), Gaps = 12/136 (8%)
Frame = +1
Query: 1132 PDRPCLGXGPXQXXLPKXXPGPPXXARXRG------GGGPXFXXPVPXGAGFR-AQXXXA 1290
P + G P PK P P A +G G P P GA R A A
Sbjct: 694 PQQQAYGAPPASVAAPKAYPPPAAAAAPQGYPPSSAPTGYQARGPAPPGAKPRVAAPYGA 753
Query: 1291 NP---XSRXXXPRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXP--RGAPPXPXX 1455
P P GR G P G G G P RGAPP
Sbjct: 754 VPRPGAPAATAPPGAPVGRGILGAIPGQR-GPAPVHGGLAGRGAMRGVPVARGAPPPGGR 812
Query: 1456 XTPXGXPXGGXXPPXG 1503
P G P G P G
Sbjct: 813 AAPGGPPLRGGMAPRG 828
Score = 31.1 bits (67), Expect = 2.5
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Frame = +1
Query: 1351 PPPXXXFGEXGXRGAPPXTXPXGGXPRGA---PPXPXXXTPXGXPXGGXXPPXGXPGXXX 1521
PP G APP P P GA P P P G P G PG
Sbjct: 725 PPSSAPTGYQARGPAPPGAKPRVAAPYGAVPRPGAPAATAPPGAPVGRGI-LGAIPGQRG 783
Query: 1522 PGPPXXG 1542
P P G
Sbjct: 784 PAPVHGG 790
Score = 30.3 bits (65), Expect = 4.3
Identities = 33/108 (30%), Positives = 35/108 (32%), Gaps = 3/108 (2%)
Frame = +1
Query: 1195 PPXXARXRG--GGGPXFXXPVPXGAGFRAQXXXAN-PXSRXXXPRRXRGGRXXAGPPPXX 1365
PP RG G P P P G + P +R P GGR G PP
Sbjct: 765 PPGAPVGRGILGAIPGQRGPAPVHGGLAGRGAMRGVPVARGAPPP---GGRAAPGGPPLR 821
Query: 1366 XFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXP 1509
G RGA P G PRG P P G P G P
Sbjct: 822 --GGMAPRGA----VPRGMAPRGNPRLP-MNPQAGIPRSQFRGARGSP 862
Score = 29.9 bits (64), Expect = 5.7
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = -2
Query: 1508 GXPXGGXXPPXG---XPXGVXXXGXGGAPRGXPPXGXVXGGAPLXPXSP 1371
G P PP G P G G G APRG P G G P P +P
Sbjct: 799 GVPVARGAPPPGGRAAPGGPPLRG-GMAPRGAVPRGMAPRGNPRLPMNP 846
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 32.7 bits (71), Expect = 0.81
Identities = 23/63 (36%), Positives = 24/63 (38%)
Frame = +2
Query: 1331 GAXPXPGPRPXXXSGNXAXGAXPPXPXPGXAXPGGPPLXXXXXPXGXXRXGXXPPPXXSX 1510
G P GP SG GA P P P A P GPP P G G PPP +
Sbjct: 2149 GPPPPMGPARHSPSGPSPLGAPPSVPPPMGAPPSGPP------PMGAPPSG--PPPMGTP 2200
Query: 1511 XXG 1519
G
Sbjct: 2201 PSG 2203
Score = 30.3 bits (65), Expect = 4.3
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -2
Query: 1541 PXXGGPGXXXPGXPXGGXXPPXGXPXGVXXXGXGGAPRGXPPXGXVXGGAPLXPXSPNXX 1362
P P P P PP G P + G P G PP G GAP P P
Sbjct: 2161 PSGPSPLGAPPSVPPPMGAPPSGPPP-MGAPPSGPPPMGTPPSGHPPMGAP--PMGPPPS 2217
Query: 1361 XGGGPA 1344
PA
Sbjct: 2218 GSHSPA 2223
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 32.7 bits (71), Expect = 0.81
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +2
Query: 1331 GAXPXPGPRPXXXSGNXAXGAXPPXPXPGXAXPGGPPLXXXXXPXGXXRXGXXPPPXXSX 1510
G P P P + G P P P PGG P P G G PPP +
Sbjct: 590 GTYPPPHPSGGYPQPSPPHGGHPHHPPP-TGYPGGYPGTHTAPPAGGYPTGQHPPPPPAG 648
Query: 1511 XXGAXAP 1531
G P
Sbjct: 649 YPGYGPP 655
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/71 (33%), Positives = 25/71 (35%)
Frame = +1
Query: 1291 NPXSRXXXPRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXG 1470
+P P GG PP G G AP P GG P G P P P G
Sbjct: 596 HPSGGYPQPSPPHGGHPHHPPPTGYPGGYPGTHTAP----PAGGYPTGQHPPP---PPAG 648
Query: 1471 XPXGGXXPPXG 1503
P G PP G
Sbjct: 649 YP-GYGPPPAG 658
Score = 29.1 bits (62), Expect = 10.0
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 5/69 (7%)
Frame = +1
Query: 1351 PPPXXXFG---EXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPP--XGXPGX 1515
PPP G G P P G P G P G P G PP G PG
Sbjct: 593 PPPHPSGGYPQPSPPHGGHPHHPPPTGYPGGYPGTHTAPPAGGYPTGQHPPPPPAGYPGY 652
Query: 1516 XXPGPPXXG 1542
GPP G
Sbjct: 653 ---GPPPAG 658
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 32.3 bits (70), Expect = 1.1
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +1
Query: 1348 GPP-PXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPG-XXX 1521
GPP P G G +G T P G PP P TP G P G PG
Sbjct: 843 GPPGPPGPPGVTGEQGVKGDTGPSGEPGPAGPPGP-LGTPGTQGAKGEPGPLGTPGRQGL 901
Query: 1522 PGPP 1533
GPP
Sbjct: 902 AGPP 905
Score = 29.5 bits (63), Expect = 7.6
Identities = 36/125 (28%), Positives = 40/125 (32%), Gaps = 11/125 (8%)
Frame = +1
Query: 1192 GPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXANPXSRXXXPRRXRGGRXXAGPPPXXXF 1371
GPP RG GP P G + A P + P + P P
Sbjct: 513 GPPGPDGDRGPQGPT-GFP-----GTKGNQGIAGPPGQIGDPGKMGPQGFKGDPGPPGPP 566
Query: 1372 GEXGXRGAPPXTXPXG--------GXP--RGAPPXPXXXTPXGXPXGGXXPPXGXPG-XX 1518
GE G GAP P G G P +GA TP G P G G
Sbjct: 567 GEVGVPGAPGMKGPIGKPGPVGDAGAPGEKGARGLSIQGTPGMDGKRGPRGPIGEKGPTG 626
Query: 1519 XPGPP 1533
PGPP
Sbjct: 627 FPGPP 631
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 32.3 bits (70), Expect = 1.1
Identities = 26/74 (35%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Frame = +1
Query: 1327 RGGRXXAGPPPXXXF-GEXGXRG--APPXTXPXGG--XPRGAPPXPXXXTPXGXPXGGXX 1491
RG + AG F GE G G PP G P G P P G P
Sbjct: 869 RGKKGEAGSDGRPGFPGESGANGLPGPPGLAGSPGPRGPNGEPGDPGMDGDKGPPGPVDA 928
Query: 1492 PPXGXPGXXXPGPP 1533
P G PG PGPP
Sbjct: 929 GPRGPPG--EPGPP 940
Score = 31.1 bits (67), Expect = 2.5
Identities = 40/143 (27%), Positives = 43/143 (30%), Gaps = 16/143 (11%)
Frame = +1
Query: 1132 PDRPCLGXGPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGF---RAQXXXANPXS 1302
P P GP P+ PG P G GP P GF R P
Sbjct: 22 PPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSRGDTGDLGPPG 81
Query: 1303 RXXXPRRXR----GGRXXAGPPPX-------XXFGEXGXRGAPPXTXPXGGXPRGAPPXP 1449
P + G AGPP G G G T P G P+G P P
Sbjct: 82 AKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLG--PKGQPGSP 139
Query: 1450 XXXTPXGXPXGGXXPP--XGXPG 1512
P P G PP G PG
Sbjct: 140 GIDIP--GPKGMDGPPGEKGLPG 160
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 32.3 bits (70), Expect = 1.1
Identities = 42/144 (29%), Positives = 43/144 (29%)
Frame = +1
Query: 1111 PPSYREFPDRPCLGXGPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXA 1290
PPS P P G P P PP R G P P P + R
Sbjct: 290 PPSRGAAPPPPSRGAPPPPPSRGSAPPPPPA----RMGTAPP--PPPPSRSSQRPP---- 339
Query: 1291 NPXSRXXXPRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXG 1470
P SR P G PPP G PP P GG P PP P P
Sbjct: 340 -PPSRGAPPPPSMG----MAPPPVG-----GAAPPPPPPPPVGGPP--PPPPPIEGRPPS 387
Query: 1471 XPXGGXXPPXGXPGXXXPGPPXXG 1542
PP G PGP G
Sbjct: 388 SLGNPPPPPPPGRGAPPPGPMIPG 411
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +2
Query: 1331 GAXPXPGPRPXXXSGNXAXGAXPPXPXPGXAXPGGPP-LXXXXXPXGXXRXGXXPPP 1498
G P P P + GA PP P G A P P + P R PPP
Sbjct: 284 GIQPPPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPP 340
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 32.3 bits (70), Expect = 1.1
Identities = 26/72 (36%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Frame = +1
Query: 1330 GGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXP--XGGXXPP-- 1497
G + GPP G G +G P P G P G P P P G P G PP
Sbjct: 51 GPQGTKGPPGSQ--GLSGVQGYPGAPGPRGRSPPGPPGIPG---PRGLPGYRGPKGPPGY 105
Query: 1498 XGXPG-XXXPGP 1530
G PG PGP
Sbjct: 106 QGMPGIAGAPGP 117
>SB_39538| Best HMM Match : VWA (HMM E-Value=0)
Length = 3208
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = -2
Query: 1532 GGPGXXXPGXPXGGXXPPXGXPXGVXXXGXGGAPRGXPPXGXVXGGAPLXPXSPNXXXGG 1353
G PG PG P G P G+ G P G P G P SP G
Sbjct: 1375 GSPGSGIPGSPGSGI--PGSPGSGIPGSPGSGIP-GSPGSGIPGSPGSGIPGSPGSGIPG 1431
Query: 1352 GPA 1344
PA
Sbjct: 1432 NPA 1434
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/57 (38%), Positives = 22/57 (38%)
Frame = +2
Query: 1328 GGAXPXPGPRPXXXSGNXAXGAXPPXPXPGXAXPGGPPLXXXXXPXGXXRXGXXPPP 1498
GG P P P P S A PP P PG A P PP P G PPP
Sbjct: 286 GGGAPVPPPPPADGS----APAPPPPPPPGGAPPPPPP-----PPPPPPGDGGAPPP 333
Score = 29.5 bits (63), Expect = 7.6
Identities = 22/60 (36%), Positives = 22/60 (36%)
Frame = +1
Query: 1330 GGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXP 1509
GG PPP G APP P P GAPP P P GG PP P
Sbjct: 286 GGGAPVPPPPPAD----GSAPAPPPPPP----PGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +1
Query: 1354 PPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPP-XGXPGXXXPGP 1530
PP G + PP G P G PP P P G PP G P GP
Sbjct: 200 PPDMMHGRGMGKRFPPGRPGGPGMPPGGPP---PFPPTSDPNMGHHPPISGPPTTSMSGP 256
Query: 1531 P 1533
P
Sbjct: 257 P 257
Score = 30.7 bits (66), Expect = 3.3
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Frame = +1
Query: 1315 PRRXRG-GRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAP-PXPXXXTPXGXPXGGX 1488
P R G G GPPP + PP + P G P P P P
Sbjct: 215 PGRPGGPGMPPGGPPPFPPTSDPNMGHHPPISGPPTTSMSGPPIPVHHGMPPQYGPGRRD 274
Query: 1489 XPPXGXP-GXXXPGPPXXG 1542
PP G P G PG P G
Sbjct: 275 MPPPGAPPGMLPPGMPPHG 293
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 31.5 bits (68), Expect = 1.9
Identities = 23/66 (34%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +1
Query: 1354 PPXXXFGEXGXRGAPPXTXPXGGXP-RGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXP-- 1524
PP F G PP + P P + P P TP G P G P G P P
Sbjct: 967 PPS--FPPSSMGGFPPSSQPSMYNPGQVQPGYPGAMTP-GAPSPGVPSPTGLPPSGPPPT 1023
Query: 1525 GPPXXG 1542
GPP G
Sbjct: 1024 GPPADG 1029
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.5 bits (68), Expect = 1.9
Identities = 26/79 (32%), Positives = 26/79 (32%), Gaps = 6/79 (7%)
Frame = +1
Query: 1315 PRRXRGGRXXAGPP---PXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTP---XGXP 1476
PR G GPP P G RG PP PRG PP P P G P
Sbjct: 439 PRPPHGMPQGGGPPQLPPNLPPPPGGMRGMPPPPMGMYPPPRGFPPPPFGPPPPFYRGPP 498
Query: 1477 XGGXXPPXGXPGXXXPGPP 1533
PP GPP
Sbjct: 499 PPRGMPPPPRQRMPSQGPP 517
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = -2
Query: 1511 PGXPXGGXXPPXGXPXGVXXXGXGGAPRGXPPXGXVXGGAPLXPXSPNXXXG 1356
PG GG P G P G G GG P G P G + GG P P G
Sbjct: 179 PGGMPGGM--PGGMPGGFP--GAGGMPGGFPGAGGMPGGFPGAGGMPGGPGG 226
Score = 29.5 bits (63), Expect = 7.6
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -2
Query: 1475 GXPXGVXXXGXGGAPRGXPPXGXVXGGAPLXPXSPNXXXGGG 1350
G P G+ GG P G P G + GG P P G G
Sbjct: 177 GFPGGMPGGMPGGMPGGFPGAGGMPGGFPGAGGMPGGFPGAG 218
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 31.1 bits (67), Expect = 2.5
Identities = 40/143 (27%), Positives = 43/143 (30%), Gaps = 16/143 (11%)
Frame = +1
Query: 1132 PDRPCLGXGPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGF---RAQXXXANPXS 1302
P P GP P+ PG P G GP P GF R P
Sbjct: 22 PPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSRGDTGDLGPPG 81
Query: 1303 RXXXPRRXR----GGRXXAGPPPX-------XXFGEXGXRGAPPXTXPXGGXPRGAPPXP 1449
P + G AGPP G G G T P G P+G P P
Sbjct: 82 AKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLG--PKGQPGSP 139
Query: 1450 XXXTPXGXPXGGXXPP--XGXPG 1512
P P G PP G PG
Sbjct: 140 GIDIP--GPKGMDGPPGEKGLPG 160
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +1
Query: 1351 PPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGP 1530
PPP G G P P G + PP P GG PP P P P
Sbjct: 175 PPP----GHYPAPGQPGGYYPPPGGYQQPPPGGYAPPPYVPQEGGGIPPQNHPLTNYPAP 230
Query: 1531 PXXG 1542
P G
Sbjct: 231 PPQG 234
Score = 30.7 bits (66), Expect = 3.3
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
Frame = +2
Query: 1340 PXPGPRPXXXSGNXAXGAXPPXPXPGXAXPGG---PPLXXXXXPXGXXRXGXXPPPXXSX 1510
P PG +P G PP P PGG PP P G G PPP
Sbjct: 157 PPPGTQPPGQGGYPGYNQPPPGHYPAPGQPGGYYPPPGGYQQPPPG----GYAPPPYVPQ 212
Query: 1511 XXGAXAP 1531
G P
Sbjct: 213 EGGGIPP 219
Score = 29.1 bits (62), Expect = 10.0
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +1
Query: 1351 PPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPX--PXXXTPXGXPXGGXXPPXGXPGXXXP 1524
PPP APP P G G PP P P P G PP G PG
Sbjct: 191 PPPGGYQQPPPGGYAPPPYVPQEGG--GIPPQNHPLTNYPAPPPQGYAPPPGGYPG---- 244
Query: 1525 GPPXXG 1542
PP G
Sbjct: 245 APPAGG 250
>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
Length = 172
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 3/49 (6%)
Frame = +1
Query: 1387 RGAPPXTXPXGGXPRGAPP---XPXXXTPXGXPXGGXXPPXGXPGXXXP 1524
R P T P G P P P TP PP G P P
Sbjct: 113 RKTPAATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTP 161
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 3/48 (6%)
Frame = +1
Query: 1390 GAPPXTXPXGGXPRGAPP---XPXXXTPXGXPXGGXXPPXGXPGXXXP 1524
GAP T P P P P TP PP G P P
Sbjct: 124 GAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPAATTP 171
>SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 3/49 (6%)
Frame = +1
Query: 1387 RGAPPXTXPXGGXPRGAPP---XPXXXTPXGXPXGGXXPPXGXPGXXXP 1524
R P T P G P P P TP PP G P P
Sbjct: 180 RKTPAATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTP 228
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 3/48 (6%)
Frame = +1
Query: 1390 GAPPXTXPXGGXPRGAPP---XPXXXTPXGXPXGGXXPPXGXPGXXXP 1524
GAP T P P P P TP PP G P P
Sbjct: 191 GAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPASTTP 238
>SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 3/49 (6%)
Frame = +1
Query: 1387 RGAPPXTXPXGGXPRGAPP---XPXXXTPXGXPXGGXXPPXGXPGXXXP 1524
R P T P G P P P TP PP G P P
Sbjct: 3 RKTPAATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTP 51
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 3/48 (6%)
Frame = +1
Query: 1390 GAPPXTXPXGGXPRGAPP---XPXXXTPXGXPXGGXXPPXGXPGXXXP 1524
GAP T P P P P TP PP G P P
Sbjct: 14 GAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPAATTP 61
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 30.7 bits (66), Expect = 3.3
Identities = 26/99 (26%), Positives = 29/99 (29%)
Frame = +1
Query: 1246 PVPXGAGFRAQXXXANPXSRXXXPRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGX 1425
P P A A A P S+ P + P P + P
Sbjct: 307 PPPPAASEPAAFAPAPPPSQAPPPPKTIPSTLPPPPVPSATSAPPPWATSNSGPKPLMST 366
Query: 1426 PRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGPPXXG 1542
P PP P GG PP PG PGPP G
Sbjct: 367 PVQRPPGMRPPGAGNGP-GGPPPPWSKPGGILPGPPPPG 404
>SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 3/49 (6%)
Frame = +1
Query: 1387 RGAPPXTXPXGGXPRGAPP---XPXXXTPXGXPXGGXXPPXGXPGXXXP 1524
R P T P G P P P TP PP G P P
Sbjct: 66 RKTPAATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTP 114
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 3/48 (6%)
Frame = +1
Query: 1390 GAPPXTXPXGGXPRGAPP---XPXXXTPXGXPXGGXXPPXGXPGXXXP 1524
GAP T P P P P TP PP G P P
Sbjct: 77 GAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPASTTP 124
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 30.3 bits (65), Expect = 4.3
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +1
Query: 1336 RXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGX 1515
R PPP G APP T P P P P G PP P
Sbjct: 211 RSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPP---PPK 267
Query: 1516 XXPGPPXXG 1542
P PP G
Sbjct: 268 NAPPPPKRG 276
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = -2
Query: 1493 GXXPPXGXPXGVXXXGXGGAPRGXPPXGXVXGGAPLXPXSPNXXXGGGPAXXRPPRXRLG 1314
G PP G P G GG PRG P G P + GG P + + G
Sbjct: 493 GGGPPRGGPRGGRGGSRGGPPRGAPRG---RSGPPRGRGGGDFGGRGGRGGTTPGKRKYG 549
Score = 29.9 bits (64), Expect = 5.7
Identities = 33/114 (28%), Positives = 34/114 (29%), Gaps = 1/114 (0%)
Frame = +1
Query: 1189 PGPPXXARXRGG-GGPXFXXPVPXGAGFRAQXXXANPXSRXXXPRRXRGGRXXAGPPPXX 1365
PG R RGG GGP P G+ Q S GG
Sbjct: 426 PGGGYEGRGRGGRGGPRGGGPRGYDGGY-GQGGGYEGYSGGYRDDYGYGGGSYDHYDSYY 484
Query: 1366 XFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPG 1527
G G P P GG PRG P G P G PP G G G
Sbjct: 485 GGGYDDYYGGGP---PRGG-PRGGRGGSRGGPPRGAPRGRSGPPRGRGGGDFGG 534
>SB_17493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 718
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = -1
Query: 1494 GGXXPXRXXPXGXXXXXRG-GPPGXAXPGXGXGGXAPXAXFPEXXXGRGPGXGXAPP 1327
GG P P G G GPPG G GG P + G PG G PP
Sbjct: 281 GGVTPPGMYPSGIGSPSIGSGPPGMEEGPPGTGGGPPGSV------GAPPGMGDGPP 331
Score = 29.1 bits (62), Expect = 10.0
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = -2
Query: 1496 GGXXPPXGXPXGVXXXGXGGAPRGXPPXGXVXGGAPLXPXSPNXXXGGGP 1347
GG PP P G+ G P G GG P G GP
Sbjct: 281 GGVTPPGMYPSGIGSPSIGSGPPGMEEGPPGTGGGPPGSVGAPPGMGDGP 330
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 30.3 bits (65), Expect = 4.3
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +1
Query: 1336 RXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGX 1515
R PPP G APP T P P P P G PP P
Sbjct: 123 RSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPP---PPK 179
Query: 1516 XXPGPPXXG 1542
P PP G
Sbjct: 180 NAPPPPKRG 188
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +1
Query: 1387 RGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGPP 1533
+G PP PP P TP G PP P P PP
Sbjct: 266 KGHPPIPSASQNATPPPPPPPPSNTPGMFASSGFQPPPPPPTDFAPPPP 314
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +1
Query: 1372 GEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGPP 1533
G G G P P P +PP P TP P PP P P PP
Sbjct: 337 GTSGGGGVNPPPPPTNNPP--SPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPP 388
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = +1
Query: 1315 PRRXRGGRXXAGPP-PXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXX 1491
P +G GP P G+ G G T P G P P T P G
Sbjct: 26 PTGPKGDTGATGPTGPTGPKGDTGATGPTGPTGPKGDTGATGPTGPKGDTGATGPTG--- 82
Query: 1492 PPXGXPGXXXPGPP 1533
P G G P P
Sbjct: 83 -PKGDTGATGPNGP 95
Score = 29.9 bits (64), Expect = 5.7
Identities = 33/139 (23%), Positives = 36/139 (25%), Gaps = 5/139 (3%)
Frame = +1
Query: 1132 PDRPCLGXGPXQXXLPKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXANPXSRXX 1311
P P GP P GP G GP G + P
Sbjct: 104 PAGPTGPTGPKGDTGPTDPTGPNGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTG 163
Query: 1312 XPRRXRGGRXXAGPPPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXX 1491
P+ G AGP G G +G T P G P T P G
Sbjct: 164 -PKGDTGATGPAGPT-----GPTGPKGDTGATGPAGPAGPTGPKGDTGATGPTDPTGPTG 217
Query: 1492 P-----PXGXPGXXXPGPP 1533
P P G G P P
Sbjct: 218 PKGPTGPKGEIGATGPTDP 236
Score = 29.9 bits (64), Expect = 5.7
Identities = 30/125 (24%), Positives = 31/125 (24%), Gaps = 6/125 (4%)
Frame = +1
Query: 1177 PKXXPGPPXXARXRGGGGPXFXXPVPXGAGFRAQXXXANPXSRXXXPRRXRGGRXXAGPP 1356
P GP G GP G P P +G GP
Sbjct: 176 PTGPTGPKGDTGATGPAGPAGPTGPKGDTGATGPTDPTGPTGPKG-PTGPKGEIGATGPT 234
Query: 1357 ----PXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXP--PXGXPGXX 1518
P G G G T P G P P T P G P P G G
Sbjct: 235 DPTGPKGDTGATGPTGPTGPTGPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGAT 294
Query: 1519 XPGPP 1533
P P
Sbjct: 295 GPAGP 299
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 29.9 bits (64), Expect = 5.7
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +1
Query: 1354 PPXXXFGEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGPP 1533
PP GAPP P G P G P P G G P G P P
Sbjct: 587 PPAGVQPPQSGSGAPPAMPPPVGAP-GGQPSYSHPMPQGYAPQGYQPEYGGQSMQPPPPK 645
Query: 1534 XXG 1542
G
Sbjct: 646 TEG 648
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 29.5 bits (63), Expect = 7.6
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Frame = +1
Query: 1348 GPPPXXXFGEXGXRGAPPXTXPXGGXPRG----APPXPXXXTPXGXPXGGXXPPXGXPGX 1515
GP P G+ G RG P GG P G P P P G G PP P
Sbjct: 323 GPDPR---GDRGPRGPPSGVPTSGGPPPGHQGLRPSGPNNQGPPG--PGPNMPPVSGPSN 377
Query: 1516 XXPG 1527
PG
Sbjct: 378 PAPG 381
>SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 221
Score = 29.5 bits (63), Expect = 7.6
Identities = 28/83 (33%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Frame = +1
Query: 1207 ARXRGGG---GPXFXXPVPXG-AGFRAQXXXANPXSRXXXPR---RXRGGRXXAGPPPXX 1365
AR RG G GP G AGFR R R RGG GP
Sbjct: 94 ARGRGRGMARGPGRGMVGARGRAGFRGNRGGFTSPGRGGAAGFRGRGRGGMTRGGPRGRA 153
Query: 1366 XFGEXGXRGAPPXTXPXGGXPRG 1434
FG G RGA G RG
Sbjct: 154 SFGGRGARGASRGAARGGRGGRG 176
>SB_12790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.5 bits (63), Expect = 7.6
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 1396 PPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXP 1524
PP P P A P P G P PP G P P
Sbjct: 74 PPTVAPAATTPPTAAPA-ATTPPTGAPAA-TTPPTGAPAATTP 114
>SB_1089| Best HMM Match : AbfB (HMM E-Value=0.034)
Length = 472
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = -2
Query: 1532 GGPGXXXPGXPXGGXXPPXGXPXGVXXXGX--GGAPRGXPPXGXVXGGAPLXPXSPNXXX 1359
GG G GG G G G GG+ G G GG + S
Sbjct: 124 GGQAGGQAGSQAGGGAAGGGGQEGGGQGGAQAGGSTSGSSSGGATSGGGGVSGSSGTSIA 183
Query: 1358 GGG 1350
GGG
Sbjct: 184 GGG 186
>SB_50275| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.5 bits (63), Expect = 7.6
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +1
Query: 1390 GAPPXTXPXG---GXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGPP 1533
G P T P G G P GAP TP G P G P G P G P
Sbjct: 15 GTPEGT-PEGTPEGTPEGAPEGTPEGTPEGTPEG---TPEGTPEGTPEGTP 61
Score = 29.5 bits (63), Expect = 7.6
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +1
Query: 1390 GAPPXTXPXG---GXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGPP 1533
GAP T P G G P G P TP G P G P G P G P
Sbjct: 31 GAPEGT-PEGTPEGTPEGTPEGTPEGTPEGTPEG---TPEGTPEGTPEGTP 77
>SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3)
Length = 713
Score = 29.5 bits (63), Expect = 7.6
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +1
Query: 1345 AGPPPXXXFGEXGXRGAPPXTXP-XGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXX 1521
A PPP GAP + P GG P G P P P G PP
Sbjct: 486 APPPPPPSDAMMQGMGAPSMSEPPAGGPPMGQGPPRPPTNPTAAPMG--QPPSMTSALSS 543
Query: 1522 PGP 1530
GP
Sbjct: 544 NGP 546
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 29.1 bits (62), Expect = 10.0
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -2
Query: 1508 GXPXGGXXPPXGXPXGVXXXGXGGAPRGXPPXGXVXG-GAPLXPXSPNXXXGGGPAXXRP 1332
G P P P G+ G GAP P G G GAP P SP GPA P
Sbjct: 265 GAPGFPGAPGFQGPPGLD--GMPGAPGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAGPTP 322
Query: 1331 PR 1326
R
Sbjct: 323 IR 324
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 29.1 bits (62), Expect = 10.0
Identities = 23/58 (39%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +2
Query: 1328 GGAXPXPGPRPXXXS-GNXAXGAXPPXPXPGXAXPGGPPLXXXXXPXGXXRXGXXPPP 1498
GG P PG P G G PP P PG A GGPP P G PPP
Sbjct: 35 GGYPPAPGGYPPSGGYGYPPAGGYPP-PQPGYA--GGPP------PPGIAPGIGGPPP 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,577,012
Number of Sequences: 59808
Number of extensions: 612393
Number of successful extensions: 3255
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 2433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5047244110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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