Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_A11_e465_01.seq
         (1548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            32   0.051
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    31   0.068
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    29   0.36 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   1.1  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    27   1.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.5  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    25   5.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.9 bits (69), Expect = 0.051
 Identities = 16/47 (34%), Positives = 16/47 (34%)
 Frame = +1

Query: 1393 APPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGPP 1533
            A P   P    P G PP P    P G P G   P     G     PP
Sbjct: 579  AQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
            chain precursor protein.
          Length = 801

 Score = 31.5 bits (68), Expect = 0.068
 Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = +1

Query: 1372 GEXGXRGAPPXTXPXGGXPR-GAPPXPXXXTPXGXPXGGXXPPXGXPGXXXP 1524
            G  G  G    + P G   R G P  P    P G P GG   P G PG   P
Sbjct: 368  GSEGLHGLKGQSGPKGEPGRDGIPGQPGIAGPAGAPGGGEGRP-GAPGPKGP 418


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 29.1 bits (62), Expect = 0.36
 Identities = 19/54 (35%), Positives = 20/54 (37%)
 Frame = +1

Query: 1372 GEXGXRGAPPXTXPXGGXPRGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGPP 1533
            GE G +G  P   P    P G P         G P  G   P G PG   PG P
Sbjct: 699  GEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGLP--GLAGPAGIPG--APGAP 748


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 15/64 (23%), Positives = 17/64 (26%)
 Frame = +2

Query: 1250 SPXGXXLGPSXXXQTPXXGXXXXDXXGGAXPXPGPRPXXXSGNXAXGAXPPXPXPGXAXP 1429
            S  G    P    Q    G         +   P P     +        PP P P    P
Sbjct: 737  SVSGGDWSPMGGDQQNSNGSSSTASSSVSTGMPSPSRSAFADGIGSPPPPPPPPPSSLSP 796

Query: 1430 GGPP 1441
            GG P
Sbjct: 797  GGVP 800


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -1

Query: 750  VNINKLCPSIQKHFRKNCMKCTYIAFCKKKNCIS 649
            V +  L  S+ KHF     KCT    C KKNC S
Sbjct: 917  VGLQFLHESLFKHFINITSKCTASTTC-KKNCAS 949


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -2

Query: 1532 GGPGXXXPGXPXGGXXPPXGXPXGVXXXGXGGAPRGXPPXGXV--XGGAPLXPXSPNXXX 1359
            GG G        GG     G P      G GGA  G P  G     GG            
Sbjct: 812  GGNGGGGGAGASGGGFLITGDPSDTIGAGGGGA--GGPLRGSSGGAGGGSSGGGGSGGTS 869

Query: 1358 GGGPAXXR 1335
            GGG +  R
Sbjct: 870  GGGSSTTR 877


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 785 HLTVSHSKYYRMLILINYALRYRNTSERIA*NVHTSHFVKKKIAS 651
           H   SH++YY M    NY+     T+  I+  ++  H   + IA+
Sbjct: 133 HSHYSHNQYYYMQNYSNYSQHNFQTAGPISSGLYNGHHPHQTIAT 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,157,034
Number of Sequences: 2352
Number of extensions: 21266
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 182064960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)