Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_A11_e465_01.seq
         (1548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       28   0.19 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   9.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   9.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   9.3  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 0.19
 Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
 Frame = +1

Query: 1381 GXRGAPPXTXPXGGXP-RGAPPXPXXXTPXGXPXGGXXPPXGXPGXXXPGP 1530
            G  G  P        P RG+PP P    P G P G   PP   P      P
Sbjct: 19   GAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPG--APPSQNPSQMMISP 67



 Score = 27.1 bits (57), Expect = 0.43
 Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +2

Query: 1346 PGPRPX-XXSGNXAXGAXPPXPXPGXAXPGGPP 1441
            PGP+P    S        PP P  G   PGGPP
Sbjct: 21   PGPQPSPHQSPQAPQRGSPPNPSQGPP-PGGPP 52



 Score = 24.2 bits (50), Expect = 3.1
 Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = +1

Query: 1348 GPPPXXXFG-EXGXRGAPPXTX--PXGGXPRGAPPXPXXXTPXGXPXGG 1485
            GP P      +   RG+PP     P  G P GAPP          P  G
Sbjct: 22   GPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPASG 70


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 181 YKVDLHILKPFSIFCY 134
           Y V+LH   PFSI+ +
Sbjct: 466 YNVELHNSSPFSIYSF 481


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 181 YKVDLHILKPFSIFCY 134
           Y V+LH   PFSI+ +
Sbjct: 504 YNVELHNSSPFSIYSF 519


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 726 SIQKHFRKNCMKCTYIAFCKKKNC 655
           +I  + R N +KC+ + F + KNC
Sbjct: 73  TITSYHRIN-LKCSLVEFSENKNC 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,364
Number of Sequences: 438
Number of extensions: 7244
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 54309750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)