Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_A10_e457_02.seq
         (1515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   1.9  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   5.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   7.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 1177 SLXVLGXAXSQSTXGPXNLREP 1242
            +L VLG +    T GP  +REP
Sbjct: 8    TLLVLGASAEDDTSGPVFVREP 29


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 887 PLSPAGVIAKRPXPIALPNXCA 952
           P  P GV  KR  P AL   CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 111 TQSTATCFLFLPSCRIXCS 55
           T  T    L LP+CR+ CS
Sbjct: 40  TPDTEATGLSLPACRLFCS 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 281,092
Number of Sequences: 336
Number of extensions: 5657
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45476700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)