Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_A10_e457_02.seq
(1515 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g05630.1 68415.m00599 autophagy 8d (APG8d) identical to autop... 158 8e-39
At4g16520.2 68417.m02501 autophagy 8f (APG8f) identical to autop... 153 4e-37
At4g16520.1 68417.m02500 autophagy 8f (APG8f) identical to autop... 153 4e-37
At2g45170.2 68415.m05624 autophagy 8e (APG8e) identical to autop... 151 1e-36
At2g45170.1 68415.m05623 autophagy 8e (APG8e) identical to autop... 151 1e-36
At3g60640.1 68416.m06785 autophagy 8g (APG8g) identical to autop... 150 3e-36
At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to autop... 144 1e-34
At4g21980.1 68417.m03182 autophagy 8a (APG8a) identical to autop... 144 1e-34
At4g04620.2 68417.m00676 autophagy 8b (APG8b) identical to autop... 142 5e-34
At4g04620.1 68417.m00675 autophagy 8b (APG8b) identical to autop... 142 5e-34
At3g15580.1 68416.m01974 autophagy 8i (APG8i) identical to autop... 120 3e-27
At3g06420.1 68416.m00740 autophagy 8h (APG8h) identical to autop... 118 1e-26
At1g15510.1 68414.m01866 pentatricopeptide (PPR) repeat-containi... 30 3.5
>At2g05630.1 68415.m00599 autophagy 8d (APG8d) identical to
autophagy 8d [Arabidopsis thaliana] GI:19912157;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 120
Score = 158 bits (384), Expect = 8e-39
Identities = 67/115 (58%), Positives = 91/115 (79%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+K EH EKR+ E +IR KYPDR+PVIVE+A K+ + D+D+KKYLVP+DLTVGQF +++
Sbjct: 6 FKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVV 65
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGY*F 520
RKRI L PE A+F FV N++PPT+A M ++Y+EH DED FLY+++S EN +G F
Sbjct: 66 RKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIFF 120
>At4g16520.2 68417.m02501 autophagy 8f (APG8f) identical to
autophagy 8f [Arabidopsis thaliana] GI:19912161;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 121
Score = 153 bits (370), Expect = 4e-37
Identities = 66/113 (58%), Positives = 87/113 (76%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+K+EH EKR+ E +IR KYPDR+PVIVEKA K+ + +DKKKYLVP+DLTVGQF ++I
Sbjct: 6 FKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVI 65
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGY 514
RKRI L E A+F FV+NV+PP A M S+Y+E D+D FLY+ +S EN +G+
Sbjct: 66 RKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118
>At4g16520.1 68417.m02500 autophagy 8f (APG8f) identical to
autophagy 8f [Arabidopsis thaliana] GI:19912161;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 121
Score = 153 bits (370), Expect = 4e-37
Identities = 66/113 (58%), Positives = 87/113 (76%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+K+EH EKR+ E +IR KYPDR+PVIVEKA K+ + +DKKKYLVP+DLTVGQF ++I
Sbjct: 6 FKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVI 65
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGY 514
RKRI L E A+F FV+NV+PP A M S+Y+E D+D FLY+ +S EN +G+
Sbjct: 66 RKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118
>At2g45170.2 68415.m05624 autophagy 8e (APG8e) identical to
autophagy 8e [Arabidopsis thaliana] GI:19912159;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 151 bits (366), Expect = 1e-36
Identities = 68/112 (60%), Positives = 86/112 (76%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+K + FEKRK E +IR KYPDR+PVIVEKA K+ + ++DKKKYLVPSDLTVGQF ++I
Sbjct: 7 FKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVI 66
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 511
RKRI L E A+F FV+NV+PPT M S+Y++ DED FLYI +S EN +G
Sbjct: 67 RKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>At2g45170.1 68415.m05623 autophagy 8e (APG8e) identical to
autophagy 8e [Arabidopsis thaliana] GI:19912159;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 151 bits (366), Expect = 1e-36
Identities = 68/112 (60%), Positives = 86/112 (76%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+K + FEKRK E +IR KYPDR+PVIVEKA K+ + ++DKKKYLVPSDLTVGQF ++I
Sbjct: 7 FKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVI 66
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 511
RKRI L E A+F FV+NV+PPT M S+Y++ DED FLYI +S EN +G
Sbjct: 67 RKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>At3g60640.1 68416.m06785 autophagy 8g (APG8g) identical to
autophagy 8g [Arabidopsis thaliana] GI:19912163;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|19912162|dbj|AB073181.1|
Length = 121
Score = 150 bits (363), Expect = 3e-36
Identities = 65/112 (58%), Positives = 88/112 (78%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
++++H FEKRK E +IR KY DRVPVIVEK+ K+ + ++DKKKYLVP+DLTVGQF ++I
Sbjct: 6 FRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVI 65
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 511
RKRI L E A+F FV+NV+PPT A M ++Y E+ +ED FLY+ +S EN +G
Sbjct: 66 RKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFG 117
>At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to
autophagy 8c [Arabidopsis thaliana] GI:19912155;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 119
Score = 144 bits (350), Expect = 1e-34
Identities = 62/112 (55%), Positives = 86/112 (76%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+K EH E+R+ E +IR KYPDR+PVIVE+A ++ + ++DKKKYLVP+DLTVGQF +++
Sbjct: 6 FKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVV 65
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 511
RKRI L E A+F FV N +PPT+A M ++Y E+ DED FLY+ +S EN +G
Sbjct: 66 RKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117
>At4g21980.1 68417.m03182 autophagy 8a (APG8a) identical to
autophagy 8a [Arabidopsis thaliana] GI:19912151;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 144 bits (349), Expect = 1e-34
Identities = 63/112 (56%), Positives = 85/112 (75%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+K + E R +E +IR KYPDR+PVIVEKA ++ + D+DKKKYLVP+DLTVGQF +++
Sbjct: 6 FKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVV 65
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 511
RKRI L E A+F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G
Sbjct: 66 RKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117
>At4g04620.2 68417.m00676 autophagy 8b (APG8b) identical to
autophagy 8b [Arabidopsis thaliana] GI:19912153;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 142 bits (344), Expect = 5e-34
Identities = 63/116 (54%), Positives = 86/116 (74%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+K + E R E +IR KYP+RVPVIVEKA ++ + D+DKKKYLVP+DLT+GQF +++
Sbjct: 6 FKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVV 65
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGY*FF 523
RKRI L E A+F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G F+
Sbjct: 66 RKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSFY 121
>At4g04620.1 68417.m00675 autophagy 8b (APG8b) identical to
autophagy 8b [Arabidopsis thaliana] GI:19912153;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 142 bits (344), Expect = 5e-34
Identities = 63/116 (54%), Positives = 86/116 (74%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+K + E R E +IR KYP+RVPVIVEKA ++ + D+DKKKYLVP+DLT+GQF +++
Sbjct: 6 FKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVV 65
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGY*FF 523
RKRI L E A+F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G F+
Sbjct: 66 RKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSFY 121
>At3g15580.1 68416.m01974 autophagy 8i (APG8i) identical to
autophagy 8i [Arabidopsis thaliana] GI:19912167;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|21636957|gb|AF492760.1|
Length = 115
Score = 120 bits (289), Expect = 3e-27
Identities = 51/112 (45%), Positives = 78/112 (69%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+KE+++ ++R E +I KYP R+PVI EK K L ++KKK+LVP D++VGQF +++
Sbjct: 4 FKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYIL 63
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 511
R+HL P ALF FVNN +P T+A M S+Y+ + D+D F+Y+ +S E +G
Sbjct: 64 SARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115
>At3g06420.1 68416.m00740 autophagy 8h (APG8h) identical to
autophagy 8h [Arabidopsis thaliana] GI:19912165;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|19912164|dbj|AB073182.1|
Length = 119
Score = 118 bits (283), Expect = 1e-26
Identities = 53/112 (47%), Positives = 74/112 (66%)
Frame = +2
Query: 176 YKEEHSFEKRKTEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 355
+K++ S ++R E I KYPDR+PVI+EK A L D++K KYLVP D+TVG F ++
Sbjct: 8 FKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHML 67
Query: 356 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 511
KR+ L P ALF FV+N +P T++ M SLY +ED FLY+ +S E +G
Sbjct: 68 SKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119
>At1g15510.1 68414.m01866 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 866
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 183 SLYWNF-IRRFFLRNNLTKKLLFSSTQST 100
+ YWNF IRR FLR + +L SS+ ST
Sbjct: 31 NFYWNFGIRRLFLRKSQGLSVLSSSSSST 59
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,766,405
Number of Sequences: 28952
Number of extensions: 492640
Number of successful extensions: 1109
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4048208640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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