Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_A08_e441_02.seq
         (1466 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   4.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   4.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   4.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   4.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   10.0 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   10.0 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   10.0 

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 135 NMFANLFKGLFGKKEMRILMVGLDAA 212
           N+FA+ F  +FGK   +I++ G   A
Sbjct: 384 NIFASYFAYIFGKFACKIMIQGFSYA 409


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 135 NMFANLFKGLFGKKEMRILMVGLDAA 212
           N+FA+ F  +FGK   +I++ G   A
Sbjct: 384 NIFASYFAYIFGKFACKIMIQGFSYA 409


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 135 NMFANLFKGLFGKKEMRILMVGLDAA 212
           N+FA+ F  +FGK   +I++ G   A
Sbjct: 384 NIFASYFAYIFGKFACKIMIQGFSYA 409


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 135 NMFANLFKGLFGKKEMRILMVGLDAA 212
           N+FA+ F  +FGK   +I++ G   A
Sbjct: 384 NIFASYFAYIFGKFACKIMIQGFSYA 409


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 51  IEFSECSFFLI 83
           +EFS C FFLI
Sbjct: 342 LEFSACGFFLI 352


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 51  IEFSECSFFLI 83
           +EFS C FFLI
Sbjct: 167 LEFSACGFFLI 177


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 285 VETVEYKNISFTVWDVGGQDKIRPL 359
           +E +  KNI  TV + G   K++PL
Sbjct: 540 LEELNLKNIDLTVLESGAFCKMQPL 564


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,225
Number of Sequences: 336
Number of extensions: 4661
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 43837900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)