Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_A05_e417_01.seq
         (1535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein ...    55   5e-09
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    26   2.5  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    26   2.5  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    26   2.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   5.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   5.8  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    25   7.7  

>AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein S18
           protein.
          Length = 46

 Score = 55.2 bits (127), Expect = 5e-09
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +2

Query: 434 LREDLERLKKIRAHRGMRHYWGLRV 508
           LREDLERLK+I AHRGMRHYWGLRV
Sbjct: 1   LREDLERLKRIHAHRGMRHYWGLRV 25


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 372 LLRNQSGILYCLGFDMIVTIFSTSSSVHSPA 280
           +LR+ SG+ + + F M V IF+    V SPA
Sbjct: 93  VLRSMSGVFWLMIFLMFVAIFTIIMWVMSPA 123


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 372 LLRNQSGILYCLGFDMIVTIFSTSSSVHSPA 280
           +LR+ SG+ + + F M V IF+    V SPA
Sbjct: 93  VLRSMSGVFWLMIFLMFVAIFTIIMWVMSPA 123


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 372 LLRNQSGILYCLGFDMIVTIFSTSSSVHSPA 280
           +LR+ SG+ + + F M V IF+    V SPA
Sbjct: 93  VLRSMSGVFWLMIFLMFVAIFTIIMWVMSPA 123


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 233 YSNIVLKKADIDLDKRAGECTEEEV-EKIVTIMSNPRQYK 349
           Y+ IVL +A + LDK   +C  + +  +I+ +     +Y+
Sbjct: 534 YAYIVLVQAVLPLDKNLNDCNRQSILGRIIRVTDEVIEYR 573


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 107 IAKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVG 226
           I   S ++P+ F H+ R+   +++  +   F+ T + G+G
Sbjct: 102 IMARSKLLPNSFVHLARLKALSLEFCKIAKFSSTVLAGLG 141


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 372 LLRNQSGILYCLGFDMIVTIFSTSSSVHSPA 280
           +L++ SG+ + + F M V IF+    V SPA
Sbjct: 127 VLQSMSGVFWLMIFLMFVAIFTIIMWVMSPA 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,199,340
Number of Sequences: 2352
Number of extensions: 21399
Number of successful extensions: 56
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 180439380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)