Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_A05_e417_01.seq
         (1535 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...   250   3e-66
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...   250   3e-66
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...   250   3e-66
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...   250   3e-66
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...   247   3e-65
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    93   1e-18
AY061500-1|AAL29048.1|  605|Drosophila melanogaster LD46023p pro...    30   9.7  
AE014134-1909|AAF52968.2|  605|Drosophila melanogaster CG7384-PA...    30   9.7  

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score =  250 bits (613), Expect = 3e-66
 Identities = 115/131 (87%), Positives = 126/131 (96%)
 Frame = +2

Query: 116 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 295
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 296 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 475
           EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 476 RGMRHYWGLRV 508
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score =  250 bits (613), Expect = 3e-66
 Identities = 115/131 (87%), Positives = 126/131 (96%)
 Frame = +2

Query: 116 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 295
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 296 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 475
           EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 476 RGMRHYWGLRV 508
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score =  250 bits (613), Expect = 3e-66
 Identities = 115/131 (87%), Positives = 126/131 (96%)
 Frame = +2

Query: 116 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 295
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 296 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 475
           EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 476 RGMRHYWGLRV 508
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score =  250 bits (613), Expect = 3e-66
 Identities = 115/131 (87%), Positives = 126/131 (96%)
 Frame = +2

Query: 116 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 295
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 296 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 475
           EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 476 RGMRHYWGLRV 508
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score =  247 bits (605), Expect = 3e-65
 Identities = 114/131 (87%), Positives = 125/131 (95%)
 Frame = +2

Query: 116 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 295
           MSLVIP+KFQ ILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 296 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 475
           EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 476 RGMRHYWGLRV 508
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 92.7 bits (220), Expect = 1e-18
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +2

Query: 212 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIP 355
           IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K+VTI+SNP QYK+P
Sbjct: 1   IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48


>AY061500-1|AAL29048.1|  605|Drosophila melanogaster LD46023p
           protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -3

Query: 387 TISFCLLRNQSGILYCLGFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYR 229
           T  FC+L   + +L   G     TIF  SS + SP  +   I+A F T+++ R
Sbjct: 215 TFDFCILLVSAAVLASFGLVENSTIFLASSMLISPL-MGPIIAAIFGTVIQDR 266


>AE014134-1909|AAF52968.2|  605|Drosophila melanogaster CG7384-PA
           protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -3

Query: 387 TISFCLLRNQSGILYCLGFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYR 229
           T  FC+L   + +L   G     TIF  SS + SP  +   I+A F T+++ R
Sbjct: 215 TFDFCILLVSAAVLASFGLVENSTIFLASSMLISPL-MGPIIAAIFGTVIQDR 266


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,686,725
Number of Sequences: 53049
Number of extensions: 986984
Number of successful extensions: 2316
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2308
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8595383688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)