Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_A04_e409_02.seq
         (1475 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   4.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   5.7  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   5.7  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   5.7  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 19/76 (25%), Positives = 33/76 (43%)
 Frame = +3

Query: 471 PVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRERIPERVVHAKGAGAFGYFEVTHDITK 650
           P  V   I T+  NG   + +++  +EI + +R        +  G    G F V+H  T 
Sbjct: 187 PANVPQMI-TLTFNGAVNIDNIDLYEEIFNGNR-------ANPNGCQIRGTFFVSHKYTN 238

Query: 651 YSAARVFEKIGKKTPI 698
           YSA +   + G +  +
Sbjct: 239 YSAVQDLHRRGHEIAV 254


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 19/76 (25%), Positives = 33/76 (43%)
 Frame = +3

Query: 471 PVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRERIPERVVHAKGAGAFGYFEVTHDITK 650
           P  V   I T+  NG   + +++  +EI + +R        +  G    G F V+H  T 
Sbjct: 180 PANVPQMI-TLTFNGAVNVDNIDLYEEIFNGNR-------ANPNGCQIRGTFFVSHKYTN 231

Query: 651 YSAARVFEKIGKKTPI 698
           YSA +   + G +  +
Sbjct: 232 YSAVQDLHRRGHEIAV 247


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -1

Query: 710 ESHCNWCF--FTNFFKHSSCRVFCYIMSYFK 624
           +S C  C+  F     H+ CR  C+   YFK
Sbjct: 66  DSICEDCYMLFREPQLHNLCRKNCFTTDYFK 96


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -1

Query: 710 ESHCNWCF--FTNFFKHSSCRVFCYIMSYFK 624
           +S C  C+  F     H+ CR  C+   YFK
Sbjct: 66  DSICEDCYMLFREPQLHNLCRKNCFTTDYFK 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 281,129
Number of Sequences: 336
Number of extensions: 5539
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44145175
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)