Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_A04_e409_02.seq
(1475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catal... 180 3e-45
Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2 prot... 179 4e-45
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 179 4e-45
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 179 4e-45
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 179 4e-45
AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical ... 179 4e-45
AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical... 171 8e-43
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 33 0.52
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 33 0.52
Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical pr... 30 4.8
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 29 8.4
>U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catalase
protein.
Length = 496
Score = 180 bits (437), Expect = 3e-45
Identities = 89/148 (60%), Positives = 109/148 (73%)
Frame = +3
Query: 390 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 569
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 570 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 749
ERIPERVVHAKGAGA GYFEVTHDITKY A +F K+GK+TP+ VRFSTV GESGSADTV
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDITKYGKADMFHKVGKQTPLLVRFSTVAGESGSADTV 122
Query: 750 RDPRGVCXEVLH**WXIGDLVGNNPSXF 833
RDPRG + + DLVGNN F
Sbjct: 123 RDPRGFSLK-FYTEEGNWDLVGNNTPIF 149
>Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2
protein.
Length = 497
Score = 179 bits (436), Expect = 4e-45
Identities = 89/148 (60%), Positives = 109/148 (73%)
Frame = +3
Query: 390 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 569
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 570 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 749
ERIPERVVHAKGAGA GYFEVTHDITKY A +F K+GK+TP+ VRFSTV GESGSADTV
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTV 122
Query: 750 RDPRGVCXEVLH**WXIGDLVGNNPSXF 833
RDPRG + + DLVGNN F
Sbjct: 123 RDPRGFSLK-FYTEEGNWDLVGNNTPIF 149
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 179 bits (436), Expect = 4e-45
Identities = 87/148 (58%), Positives = 109/148 (73%)
Frame = +3
Query: 390 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 569
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 570 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 749
ERIPERVVHAKGAGA GYFEVTHDI+KY A +F K+GK+TP+ +RFSTVGGESGSADT
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTA 122
Query: 750 RDPRGVCXEVLH**WXIGDLVGNNPSXF 833
RDPRG + + DLVGNN F
Sbjct: 123 RDPRGFAIK-FYTEEGNWDLVGNNTPIF 149
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 179 bits (436), Expect = 4e-45
Identities = 87/148 (58%), Positives = 109/148 (73%)
Frame = +3
Query: 390 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 569
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 570 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 749
ERIPERVVHAKGAGA GYFEVTHDI+KY A +F K+GK+TP+ +RFSTVGGESGSADT
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTA 122
Query: 750 RDPRGVCXEVLH**WXIGDLVGNNPSXF 833
RDPRG + + DLVGNN F
Sbjct: 123 RDPRGFAIK-FYTEEGNWDLVGNNTPIF 149
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 179 bits (436), Expect = 4e-45
Identities = 87/148 (58%), Positives = 109/148 (73%)
Frame = +3
Query: 390 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 569
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 570 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 749
ERIPERVVHAKGAGA GYFEVTHDI+KY A +F K+GK+TP+ +RFSTVGGESGSADT
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTA 122
Query: 750 RDPRGVCXEVLH**WXIGDLVGNNPSXF 833
RDPRG + + DLVGNN F
Sbjct: 123 RDPRGFAIK-FYTEEGNWDLVGNNTPIF 149
>AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.6 protein.
Length = 497
Score = 179 bits (436), Expect = 4e-45
Identities = 89/148 (60%), Positives = 109/148 (73%)
Frame = +3
Query: 390 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 569
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 570 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 749
ERIPERVVHAKGAGA GYFEVTHDITKY A +F K+GK+TP+ VRFSTV GESGSADTV
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTV 122
Query: 750 RDPRGVCXEVLH**WXIGDLVGNNPSXF 833
RDPRG + + DLVGNN F
Sbjct: 123 RDPRGFSLK-FYTEEGNWDLVGNNTPIF 149
>AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical
protein Y54G11A.13 protein.
Length = 512
Score = 171 bits (417), Expect = 8e-43
Identities = 85/146 (58%), Positives = 106/146 (72%)
Frame = +3
Query: 396 ASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRER 575
A DQL ++ ++ P +TT +GAP+ KTA+ T G+ GP L+QD+ ++DE++ FDRER
Sbjct: 21 AEDQLKAYRDRNQE-PHLLTTSNGAPIYSKTAVLTAGRRGPMLMQDIVYMDEMAHFDRER 79
Query: 576 IPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTVRD 755
IPERVVHAKG GA GYFEVTHDITKY A +F K+GK+TP+ VRFSTV GESGSADTVRD
Sbjct: 80 IPERVVHAKGGGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRD 139
Query: 756 PRGVCXEVLH**WXIGDLVGNNPSXF 833
PRG + + DLVGNN F
Sbjct: 140 PRGFSLK-FYTEEGNWDLVGNNTPIF 164
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 33.1 bits (72), Expect = 0.52
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 393 PASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 569
P + Q VN+ LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 33.1 bits (72), Expect = 0.52
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 393 PASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 569
P + Q VN+ LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical
protein C23H4.2 protein.
Length = 583
Score = 29.9 bits (64), Expect = 4.8
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 399 SDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQ-----DVNF-LDEISS 560
S L NF K K SPG+ G ++ + + ++GP +L+ DV+F + E++
Sbjct: 420 SKLLTNFTKHGKPSPGWDPVDPGRMNYLELKVDSKARSGPVMLEGYHAKDVSFWVGEMTE 479
Query: 561 FDRERIPERVVHAKG 605
FD+ ++ H++G
Sbjct: 480 FDQN--VSKMRHSEG 492
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 29.1 bits (62), Expect = 8.4
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 396 ASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRER 575
++ L+ F K+ +D P T S A +AIQ +N A + DV F D + E
Sbjct: 14 SAKNLIPFAKNTEDKPVDADTASDAKDAKDSAIQEAVQNASAAINDV-FTDAVDKL--EE 70
Query: 576 IPERVV 593
+ + VV
Sbjct: 71 VKDTVV 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,695,585
Number of Sequences: 27780
Number of extensions: 595243
Number of successful extensions: 1285
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4235517946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -