Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_H12_e672_16.seq
(1466 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 436 e-122
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 433 e-121
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 431 e-121
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 429 e-120
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 429 e-120
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 429 e-120
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 428 e-120
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 427 e-120
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 426 e-119
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 225 4e-59
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 225 4e-59
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 225 6e-59
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 223 2e-58
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 223 2e-58
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 221 1e-57
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 221 1e-57
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 182 5e-46
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 181 9e-46
At4g37190.1 68417.m05265 expressed protein 34 0.27
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 32 0.83
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 32 1.1
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 31 2.5
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 31 2.5
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 29 7.7
At2g28540.1 68415.m03467 expressed protein 29 7.7
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 29 7.7
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 436 bits (1074), Expect = e-122
Identities = 198/254 (77%), Positives = 220/254 (86%), Gaps = 1/254 (0%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 341
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 342 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 521
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 522 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 701
VRKE+E+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 702 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTX 881
VEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLSTP++GDL HL+S TMSGVT
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCS 240
Query: 882 LRFPGQLNADLRNL 923
LRFPGQLN+DLR L
Sbjct: 241 LRFPGQLNSDLRKL 254
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 433 bits (1066), Expect = e-121
Identities = 199/254 (78%), Positives = 218/254 (85%), Gaps = 1/254 (0%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 341
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 342 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 521
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 522 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 701
VRKE+E+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 702 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTX 881
VEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLSTP++GDL HL+S TMSGVT
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCS 240
Query: 882 LRFPGQLNADLRNL 923
LRFPGQLN+DLR L
Sbjct: 241 LRFPGQLNSDLRKL 254
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 431 bits (1061), Expect = e-121
Identities = 196/253 (77%), Positives = 218/253 (86%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 344
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 345 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 524
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 525 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 704
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 705 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTXL 884
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDL HL+S TMSGVT L
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 885 RFPGQLNADLRNL 923
RFPGQLN+DLR L
Sbjct: 241 RFPGQLNSDLRKL 253
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 429 bits (1057), Expect = e-120
Identities = 198/253 (78%), Positives = 215/253 (84%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 344
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 345 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 524
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 525 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 704
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 705 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTXL 884
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+ PT+GDL HL+S TMSGVT L
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCL 240
Query: 885 RFPGQLNADLRNL 923
RFPGQLN+DLR L
Sbjct: 241 RFPGQLNSDLRKL 253
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 429 bits (1056), Expect = e-120
Identities = 196/253 (77%), Positives = 216/253 (85%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 344
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 345 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 524
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 525 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 704
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 705 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTXL 884
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDL HL+S TMSGVT L
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 885 RFPGQLNADLRNL 923
RFPGQLN+DLR L
Sbjct: 241 RFPGQLNSDLRKL 253
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 429 bits (1056), Expect = e-120
Identities = 196/253 (77%), Positives = 216/253 (85%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 344
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 345 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 524
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 525 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 704
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 705 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTXL 884
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDL HL+S TMSGVT L
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 885 RFPGQLNADLRNL 923
RFPGQLN+DLR L
Sbjct: 241 RFPGQLNSDLRKL 253
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 428 bits (1055), Expect = e-120
Identities = 196/253 (77%), Positives = 217/253 (85%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 344
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 345 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 524
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 525 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 704
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 705 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTXL 884
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKLSTP++GDL HL+S TMSGVT L
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCL 240
Query: 885 RFPGQLNADLRNL 923
RFPGQLN+DLR L
Sbjct: 241 RFPGQLNSDLRKL 253
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 427 bits (1053), Expect = e-120
Identities = 198/253 (78%), Positives = 215/253 (84%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 344
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 345 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 524
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 525 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 704
RKE+E+ DCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 705 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTXL 884
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+ PT+GDL HL+S TMSGVT L
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCL 240
Query: 885 RFPGQLNADLRNL 923
RFPGQLN+DLR L
Sbjct: 241 RFPGQLNSDLRKL 253
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 426 bits (1050), Expect = e-119
Identities = 194/253 (76%), Positives = 216/253 (85%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 344
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 345 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 524
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 525 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 704
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 705 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTXL 884
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDL HL+S TMSGVT L
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 885 RFPGQLNADLRNL 923
RFPGQLN+DLR L
Sbjct: 241 RFPGQLNSDLRKL 253
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 225 bits (551), Expect = 4e-59
Identities = 106/252 (42%), Positives = 152/252 (60%), Gaps = 2/252 (0%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 338
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 339 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 518
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 519 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 698
VRK +++C LQGF ++ +Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 699 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTT 878
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +L L+S +S +TT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 879 XLRFPGQLNADL 914
LRF G +N D+
Sbjct: 241 SLRFDGAINVDI 252
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 225 bits (551), Expect = 4e-59
Identities = 106/252 (42%), Positives = 152/252 (60%), Gaps = 2/252 (0%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 338
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 339 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 518
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 519 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 698
VRK +++C LQGF ++ +Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 699 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTT 878
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +L L+S +S +TT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 879 XLRFPGQLNADL 914
LRF G +N D+
Sbjct: 241 SLRFDGAINVDI 252
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 225 bits (550), Expect = 6e-59
Identities = 104/252 (41%), Positives = 154/252 (61%), Gaps = 2/252 (0%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 338
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 339 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 518
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 519 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 698
+RK +++C LQGF ++ ++ + +++ PSP+VS
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 699 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTT 878
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +L L+S T+S +TT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTT 240
Query: 879 XLRFPGQLNADL 914
LRF G +N D+
Sbjct: 241 SLRFDGAINVDI 252
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 223 bits (545), Expect = 2e-58
Identities = 107/252 (42%), Positives = 151/252 (59%), Gaps = 2/252 (0%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 338
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 339 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 518
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 519 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 698
+RK +++C LQGF ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 699 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTT 878
VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +L LVS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTA 240
Query: 879 XLRFPGQLNADL 914
LRF G LN D+
Sbjct: 241 SLRFDGALNVDV 252
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 223 bits (545), Expect = 2e-58
Identities = 107/252 (42%), Positives = 151/252 (59%), Gaps = 2/252 (0%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 338
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 339 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 518
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 519 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 698
+RK +++C LQGF ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 699 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTT 878
VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +L LVS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTA 240
Query: 879 XLRFPGQLNADL 914
LRF G LN D+
Sbjct: 241 SLRFDGALNVDV 252
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 221 bits (539), Expect = 1e-57
Identities = 106/252 (42%), Positives = 150/252 (59%), Gaps = 2/252 (0%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 338
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 339 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 518
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 519 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 698
+RK +++C LQGF ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 699 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTT 878
VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +L LVS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTA 240
Query: 879 XLRFPGQLNADL 914
LRF G LN D+
Sbjct: 241 SLRFDGALNVDV 252
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 221 bits (539), Expect = 1e-57
Identities = 106/252 (42%), Positives = 150/252 (59%), Gaps = 2/252 (0%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 338
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 339 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 518
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 519 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 698
+RK +++C LQGF ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 699 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTT 878
VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +L LVS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTA 240
Query: 879 XLRFPGQLNADL 914
LRF G LN D+
Sbjct: 241 SLRFDGALNVDV 252
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 182 bits (443), Expect = 5e-46
Identities = 91/263 (34%), Positives = 144/263 (54%), Gaps = 3/263 (1%)
Frame = +3
Query: 168 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 347
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 348 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 521
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 522 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVSDT 698
+ +E++ D L+GF + + Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 699 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTT 878
VV+PYN+ L++ +L N D +DN AL I L L+ PT+ LVS MS TT
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTT 241
Query: 879 XLRFPGQLNADLRNLPXTWFXSP 947
LR+PG +N DL L + +P
Sbjct: 242 TLRYPGYMNNDLVGLLASLIPTP 264
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 181 bits (441), Expect = 9e-46
Identities = 91/263 (34%), Positives = 144/263 (54%), Gaps = 3/263 (1%)
Frame = +3
Query: 168 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 347
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 348 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 521
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 522 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVSDT 698
+ +E++ D L+GF + + Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 699 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTT 878
VV+PYN+ L++ +L N D +DN AL I L L+ PT+ LVS MS TT
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTT 241
Query: 879 XLRFPGQLNADLRNLPXTWFXSP 947
LR+PG +N DL L + +P
Sbjct: 242 TLRYPGYMNNDLVGLLASLIPTP 264
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.27
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +3
Query: 165 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 332
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 333 GKYVPRAILVDLEP--GTMDS 389
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 32.3 bits (70), Expect = 0.83
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +3
Query: 690 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 821
S+ ++ P ++++ +LV D TY + + ++ D C R +K+ST
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMST 120
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +3
Query: 498 LVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 677
+++SV VVRKE+E+C+CLQ F RE D + Y V
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF--FVSGSFKVDSVEAKKKEENFRETLRDMANSKYEYVK 57
Query: 678 SPKVSDTVVEP 710
S ++ D V+ P
Sbjct: 58 SFELEDEVMLP 68
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 726 SVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTXLRFP 893
++ LVE + ++N DIC+ S PT +L LVSL + G + RFP
Sbjct: 819 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFP 874
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 726 SVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLXHLVSLTMSGVTTXLRFP 893
++ LVE + ++N DIC+ S PT +L LVSL + G + RFP
Sbjct: 780 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFP 835
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 29.1 bits (62), Expect = 7.7
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +1
Query: 562 SNSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS 741
S+S ++ VP PV Y+S+R + S T Q P S+PT+ L ++S
Sbjct: 67 SSSFSIPVPVPVPVPGRYVSKRERSLLASLSTIPTPDQSSDLSQKPYSSPTV-LGSISDS 125
Query: 742 *KTQTKHTVSITRH 783
+H +S RH
Sbjct: 126 --DVPRHVLSSVRH 137
>At2g28540.1 68415.m03467 expressed protein
Length = 655
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 117 NTMNATXRTTLLPSCRIXCSPGDXTSX*XRPPPRG 13
+T+ ++ + T +P C + PG RPPP G
Sbjct: 448 STLPSSYKPTSVPRCPVSAPPGFSVPTPSRPPPPG 482
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 29.1 bits (62), Expect = 7.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 532 NPNHVIVYKDS-NSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSN 708
+P+ ++YK + H P P ++H + KS PT H S P P Y +PS
Sbjct: 522 SPSPKVIYKSPPHPHVCVCPPPPPCYSHS-PKIEYKSPPTPYVYH--SPPPPPYYSPSPK 578
Query: 709 PTMRLS 726
P + S
Sbjct: 579 PAYKSS 584
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,620,107
Number of Sequences: 28952
Number of extensions: 447896
Number of successful extensions: 1224
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 3893991168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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