Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_H10_e656_16.seq
         (1526 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.       98   7e-22
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    27   1.9  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   5.8  

>Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.
          Length = 107

 Score = 97.9 bits (233), Expect = 7e-22
 Identities = 57/99 (57%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
 Frame = +2

Query: 152 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD-LKVKRITP 328
           LQFPVGRIHR L+    +  RVG  A VY AA++EYL AEVLELAGN ++D  K +RI P
Sbjct: 8   LQFPVGRIHRLLRKGNYAE-RVGPGAPVYLAAVMEYLAAEVLELAGNRARDNKKERRIIP 66

Query: 329 RHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 442
           R LQLAIR DEE + L+ + TIA GGV+P+I   L+ K+
Sbjct: 67  R-LQLAIRNDEEENKLLRRVTIAQGGVLPNIQAVLLPKR 104


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 185 LKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 289
           L  R T H RV     ++  A L YL AE+  ++G
Sbjct: 464 LVTRFTDHVRVIEPIFIFVMAYLAYLNAEIFHMSG 498


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 479 LQRTILHLTTGHNFYMLIHPFELGIYIVFYNNVSDVDTVHCLSGQN 616
           + R    + TGH++  ++  +    Y+ F  N      ++C+SGQN
Sbjct: 340 VMRVRAFVETGHSYLTILVQYYC--YLFFITNFGINFILYCISGQN 383


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,180,130
Number of Sequences: 2352
Number of extensions: 21430
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 179220195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)