Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_H08_e640_16.seq
(1524 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein. 36 0.52
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 36 0.52
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 36 0.52
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 34 1.6
X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich pro... 34 1.6
S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein. 34 1.6
S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein. 34 1.6
S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor p... 34 1.6
S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-ri... 34 1.6
M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich pro... 34 1.6
M81379-1|AAA51556.1| 340|Homo sapiens alpha-3 type IV collagen ... 34 1.6
K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein. 34 1.6
BC046645-1|AAH46645.1| 215|Homo sapiens CCBE1 protein protein. 34 1.6
BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein. 34 1.6
AY358347-1|AAQ88713.1| 406|Homo sapiens VPPP1921 protein. 34 1.6
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 34 1.6
AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII colla... 34 1.6
AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein. 34 1.6
AB075863-1|BAB85569.1| 418|Homo sapiens KIAA1983 protein protein. 34 1.6
X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich pro... 33 2.1
K03208-1|AAA60189.1| 251|Homo sapiens PRB2 protein. 33 2.1
BC029485-1|AAH29485.1| 243|Homo sapiens C1q and tumor necrosis ... 33 2.1
AY358383-1|AAQ88749.1| 243|Homo sapiens CTRP5 protein. 33 2.1
AL110261-1|CAB53702.1| 219|Homo sapiens hypothetical protein pr... 33 2.1
AJ862823-2|CAH93522.1| 243|Homo sapiens C1Q TNF related protein... 33 2.1
AF329841-1|AAK17965.1| 243|Homo sapiens complement-c1q tumor ne... 33 2.1
BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII, a... 33 3.6
AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen mid... 33 3.6
AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen lon... 33 3.6
AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen sho... 33 3.6
AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collag... 33 3.6
AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen pro... 33 3.6
AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen pro... 33 3.6
Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein. 32 4.8
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 32 4.8
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 32 4.8
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 32 4.8
BC083495-1|AAH83495.1| 388|Homo sapiens COL14A1 protein protein. 32 4.8
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 32 4.8
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 32 4.8
BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein. 32 4.8
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 32 4.8
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 32 4.8
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 32 4.8
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 32 4.8
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 32 4.8
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 32 4.8
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 32 6.4
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 32 6.4
M60832-1|AAA62822.1| 635|Homo sapiens alpha-2 type VIII collage... 32 6.4
BC126108-1|AAI26109.1| 957|Homo sapiens collagen, type XXI, alp... 32 6.4
BC099645-1|AAH99645.1| 657|Homo sapiens COL8A2 protein protein. 32 6.4
BC096297-1|AAH96297.1| 657|Homo sapiens COL8A2 protein protein. 32 6.4
BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein. 32 6.4
BC045597-1|AAH45597.1| 480|Homo sapiens COL21A1 protein protein. 32 6.4
AL713657-1|CAD28466.1| 417|Homo sapiens hypothetical protein pr... 32 6.4
AL513530-3|CAH73912.1| 954|Homo sapiens collagen type XXI alpha... 32 6.4
AL513530-2|CAH73913.1| 957|Homo sapiens collagen type XXI alpha... 32 6.4
AL138787-1|CAI22267.1| 703|Homo sapiens collagen type VIII alph... 32 6.4
AL034452-2|CAI22396.1| 954|Homo sapiens collagen type XXI alpha... 32 6.4
AL034452-1|CAI22395.1| 957|Homo sapiens collagen type XXI alpha... 32 6.4
AL031782-4|CAI22497.1| 954|Homo sapiens collagen type XXI alpha... 32 6.4
AL031782-3|CAI22496.1| 957|Homo sapiens collagen type XXI alpha... 32 6.4
AK074129-1|BAB84955.1| 705|Homo sapiens FLJ00201 protein protein. 32 6.4
AF438327-1|AAL86699.1| 957|Homo sapiens alpha 1 type XXI collag... 32 6.4
AF414088-1|AAL02227.1| 957|Homo sapiens collagen XXI protein. 32 6.4
AF330693-1|AAL50033.1| 954|Homo sapiens alpha 1 chain-like coll... 32 6.4
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 32 6.4
Z95116-3|CAI17988.1| 423|Homo sapiens protein ( Human DNA seque... 31 8.4
X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein. 31 8.4
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 31 8.4
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 31 8.4
M63473-1|AAA51558.1| 762|Homo sapiens alpha-5 type IV collagen ... 31 8.4
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 31 8.4
M31115-1|AAA52045.1| 772|Homo sapiens COL4A5 protein. 31 8.4
K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary ... 31 8.4
CR456407-1|CAG30293.1| 443|Homo sapiens bK984G1.1 protein. 31 8.4
BC046358-1|AAH46358.1| 443|Homo sapiens EMI domain containing 1... 31 8.4
AL831910-1|CAD38573.1| 226|Homo sapiens hypothetical protein pr... 31 8.4
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 31 8.4
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 31 8.4
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 31 8.4
AL031186-3|CAI18002.1| 423|Homo sapiens protein ( Human DNA seq... 31 8.4
AJ416090-1|CAC94777.1| 441|Homo sapiens putative emu1 protein p... 31 8.4
>M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein.
Length = 625
Score = 35.5 bits (78), Expect = 0.52
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P P + G PG PG +G PG P P P G P G
Sbjct: 493 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDP-GERGPRG 530
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 35.5 bits (78), Expect = 0.52
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P P + G PG PG +G PG P P P G P G
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDP-GERGPRG 1344
Score = 32.3 bits (70), Expect = 4.8
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKX-GXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
PR PK G PG PGE G G P P P G P G
Sbjct: 1729 PRGPKGDPGLPGAPGERGIEGFRGPPGPQGDP-GVRGPAG 1767
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 35.5 bits (78), Expect = 0.52
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P P + G PG PG +G PG P P P G P G
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDP-GERGPRG 1344
Score = 32.3 bits (70), Expect = 4.8
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKX-GXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
PR PK G PG PGE G G P P P G P G
Sbjct: 1729 PRGPKGDPGLPGAPGERGIEGFRGPPGPQGDP-GVRGPAG 1767
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 chain
protein.
Length = 1670
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P G PG PGE +G PG P PPGN G P G
Sbjct: 1357 PGSPGPPGTPGEPGMQGEPGPPGPPGN--LGPCGPRG 1391
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG PG+ +G G P PPG+ G A P G
Sbjct: 1064 PGPPGPTGDPGLPGDMGKKGEMGQPGPPGH--LGPAGPEG 1101
>X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich protein
protein.
Length = 297
Score = 33.9 bits (74), Expect = 1.6
Identities = 37/134 (27%), Positives = 44/134 (32%), Gaps = 6/134 (4%)
Frame = -1
Query: 1464 PXXKXKTPXFQGG---KXXPXXGKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXP 1294
P K + P QGG + P GK GP P + G P G
Sbjct: 19 PPGKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 75
Query: 1293 GXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXXPXXXXXSPP--GGEP 1123
G PG P+ PP+ G PPPG P P PP G +P
Sbjct: 76 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 135
Query: 1122 XXXXPPTGXXEXPP 1081
PP G + PP
Sbjct: 136 QGPPPPPGKPQGPP 149
>S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein.
Length = 382
Score = 33.9 bits (74), Expect = 1.6
Identities = 37/135 (27%), Positives = 44/135 (32%), Gaps = 7/135 (5%)
Frame = -1
Query: 1464 PXXKXKTPXFQGG---KXXPXXGKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXP 1294
P K + P QGG + P GK GP P + G P G
Sbjct: 40 PPGKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 96
Query: 1293 GXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXXPXXXXXSPP---GGE 1126
G PG P+ PP+ G PPPG P P PP G +
Sbjct: 97 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQ 156
Query: 1125 PXXXXPPTGXXEXPP 1081
P PP G + PP
Sbjct: 157 PQGPPPPPGKPQGPP 171
Score = 33.5 bits (73), Expect = 2.1
Identities = 25/90 (27%), Positives = 29/90 (32%), Gaps = 4/90 (4%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXX 1162
G P G G PG P+ PP+ G PPPG P
Sbjct: 206 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKSQGPPPPGKPQGPPPQGGSKSRSSRS 265
Query: 1161 PXXXXXSPP---GGEPXXXXPPTGXXEXPP 1081
P PP G +P PP G + PP
Sbjct: 266 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 295
Score = 32.7 bits (71), Expect = 3.6
Identities = 25/90 (27%), Positives = 29/90 (32%), Gaps = 4/90 (4%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXX 1162
G P G G PG P+ PP+ G PPPG P
Sbjct: 144 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARS 203
Query: 1161 PXXXXXSPP---GGEPXXXXPPTGXXEXPP 1081
P PP G +P PP G + PP
Sbjct: 204 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 233
Score = 31.9 bits (69), Expect = 6.4
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXX 1162
G P G G PG P+ PP+ G PPPG P
Sbjct: 21 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSP 80
Query: 1161 PXXXXXSPP--GGEPXXXXPPTGXXEXPP 1081
P PP G +P PP G + PP
Sbjct: 81 PGKPQGPPPQGGNQPQGPPPPPGKPQGPP 109
>S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein.
Length = 358
Score = 33.9 bits (74), Expect = 1.6
Identities = 37/134 (27%), Positives = 44/134 (32%), Gaps = 6/134 (4%)
Frame = -1
Query: 1464 PXXKXKTPXFQGG---KXXPXXGKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXP 1294
P K + P QGG + P GK GP P + G P G
Sbjct: 19 PPGKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 75
Query: 1293 GXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXXPXXXXXSPP--GGEP 1123
G PG P+ PP+ G PPPG P P PP G +P
Sbjct: 76 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 135
Query: 1122 XXXXPPTGXXEXPP 1081
PP G + PP
Sbjct: 136 QGPPPPPGKPQGPP 149
Score = 33.9 bits (74), Expect = 1.6
Identities = 37/134 (27%), Positives = 44/134 (32%), Gaps = 6/134 (4%)
Frame = -1
Query: 1464 PXXKXKTPXFQGG---KXXPXXGKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXP 1294
P K + P QGG + P GK GP P + G P G
Sbjct: 80 PPGKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSQSPRSPPGKPQGPPPQGGNQPQ 136
Query: 1293 GXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXXPXXXXXSPP--GGEP 1123
G PG P+ PP+ G PPPG P P PP G +P
Sbjct: 137 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 196
Query: 1122 XXXXPPTGXXEXPP 1081
PP G + PP
Sbjct: 197 QGPPPPPGKPQGPP 210
>S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor
protein.
Length = 297
Score = 33.9 bits (74), Expect = 1.6
Identities = 37/134 (27%), Positives = 44/134 (32%), Gaps = 6/134 (4%)
Frame = -1
Query: 1464 PXXKXKTPXFQGG---KXXPXXGKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXP 1294
P K + P QGG + P GK GP P + G P G
Sbjct: 19 PPGKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 75
Query: 1293 GXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXXPXXXXXSPP--GGEP 1123
G PG P+ PP+ G PPPG P P PP G +P
Sbjct: 76 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 135
Query: 1122 XXXXPPTGXXEXPP 1081
PP G + PP
Sbjct: 136 QGPPPPPGKPQGPP 149
>S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-rich
protein protein.
Length = 331
Score = 33.9 bits (74), Expect = 1.6
Identities = 37/134 (27%), Positives = 44/134 (32%), Gaps = 6/134 (4%)
Frame = -1
Query: 1464 PXXKXKTPXFQGG---KXXPXXGKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXP 1294
P K + P QGG + P GK GP P + G P G
Sbjct: 53 PPGKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 109
Query: 1293 GXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXXPXXXXXSPP--GGEP 1123
G PG P+ PP+ G PPPG P P PP G +P
Sbjct: 110 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 169
Query: 1122 XXXXPPTGXXEXPP 1081
PP G + PP
Sbjct: 170 QGPPPPPGKPQGPP 183
Score = 32.3 bits (70), Expect = 4.8
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXX 1162
G P G G PG P+ PP+ G PPPG P
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSP 93
Query: 1161 PXXXXXSPP--GGEPXXXXPPTGXXEXPP 1081
P PP G +P PP G + PP
Sbjct: 94 PGKPQGPPPQGGNQPQGPPPPPGKPQGPP 122
>M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich protein
protein.
Length = 331
Score = 33.9 bits (74), Expect = 1.6
Identities = 37/134 (27%), Positives = 44/134 (32%), Gaps = 6/134 (4%)
Frame = -1
Query: 1464 PXXKXKTPXFQGG---KXXPXXGKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXP 1294
P K + P QGG + P GK GP P + G P G
Sbjct: 53 PPGKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 109
Query: 1293 GXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXXPXXXXXSPP--GGEP 1123
G PG P+ PP+ G PPPG P P PP G +P
Sbjct: 110 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 169
Query: 1122 XXXXPPTGXXEXPP 1081
PP G + PP
Sbjct: 170 QGPPPPPGKPQGPP 183
Score = 32.3 bits (70), Expect = 4.8
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXX 1162
G P G G PG P+ PP+ G PPPG P
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSP 93
Query: 1161 PXXXXXSPP--GGEPXXXXPPTGXXEXPP 1081
P PP G +P PP G + PP
Sbjct: 94 PGKPQGPPPQGGNQPQGPPPPPGKPQGPP 122
>M81379-1|AAA51556.1| 340|Homo sapiens alpha-3 type IV collagen
protein.
Length = 340
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P G PG PGE +G PG P PPGN G P G
Sbjct: 27 PGSPGPPGTPGEPGMQGEPGPPGPPGN--LGPCGPRG 61
>K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein.
Length = 331
Score = 33.9 bits (74), Expect = 1.6
Identities = 37/134 (27%), Positives = 44/134 (32%), Gaps = 6/134 (4%)
Frame = -1
Query: 1464 PXXKXKTPXFQGG---KXXPXXGKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXP 1294
P K + P QGG + P GK GP P + G P G
Sbjct: 53 PPGKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 109
Query: 1293 GXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXXPXXXXXSPP--GGEP 1123
G PG P+ PP+ G PPPG P P PP G +P
Sbjct: 110 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 169
Query: 1122 XXXXPPTGXXEXPP 1081
PP G + PP
Sbjct: 170 QGPPPPPGKPQGPP 183
Score = 32.3 bits (70), Expect = 4.8
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXX 1162
G P G G PG P+ PP+ G PPPG P
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSP 93
Query: 1161 PXXXXXSPP--GGEPXXXXPPTGXXEXPP 1081
P PP G +P PP G + PP
Sbjct: 94 PGKPQGPPPQGGNQPQGPPPPPGKPQGPP 122
>BC046645-1|AAH46645.1| 215|Homo sapiens CCBE1 protein protein.
Length = 215
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGN-XPXGXAXPXG 1215
P P G PG PG G PG P PPG P G P G
Sbjct: 58 PGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGSMGPMG 98
>BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein.
Length = 338
Score = 33.9 bits (74), Expect = 1.6
Identities = 37/134 (27%), Positives = 44/134 (32%), Gaps = 6/134 (4%)
Frame = -1
Query: 1464 PXXKXKTPXFQGG---KXXPXXGKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXP 1294
P K + P QGG + P GK GP P + G P G
Sbjct: 60 PPGKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 116
Query: 1293 GXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXXPXXXXXSPP--GGEP 1123
G PG P+ PP+ G PPPG P P PP G +P
Sbjct: 117 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 176
Query: 1122 XXXXPPTGXXEXPP 1081
PP G + PP
Sbjct: 177 QGPPPPPGKPQGPP 190
Score = 32.3 bits (70), Expect = 4.8
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXX 1162
G P G G PG P+ PP+ G PPPG P
Sbjct: 41 GNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSP 100
Query: 1161 PXXXXXSPP--GGEPXXXXPPTGXXEXPP 1081
P PP G +P PP G + PP
Sbjct: 101 PGKPQGPPPQGGNQPQGPPPPPGKPQGPP 129
>AY358347-1|AAQ88713.1| 406|Homo sapiens VPPP1921 protein.
Length = 406
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGN-XPXGXAXPXG 1215
P P G PG PG G PG P PPG P G P G
Sbjct: 249 PGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGSMGPMG 289
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P G PG PGE +G PG P PPGN G P G
Sbjct: 1357 PGSPGPPGTPGEPGMQGEPGPPGPPGN--LGPCGPRG 1391
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG PG+ +G G P PPG+ G A P G
Sbjct: 1064 PGPPGPTGDPGLPGDMGKKGEMGQPGPPGH--LGPAGPEG 1101
>AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII collagen
protein.
Length = 1626
Score = 33.9 bits (74), Expect = 1.6
Identities = 24/65 (36%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = -2
Query: 1406 GKKGAXFXPXL-XXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGX 1230
GKKG P + L Q P P G PG PGE G PG PP P G
Sbjct: 696 GKKGDMGPPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPG-PPGPTGPPGK 754
Query: 1229 AXPXG 1215
P G
Sbjct: 755 DGPNG 759
>AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein.
Length = 1084
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P G PG PGE +G PG P PPGN G P G
Sbjct: 771 PGSPGPPGTPGEPGMQGEPGPPGPPGN--LGPCGPRG 805
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG PG+ +G G P PPG+ G A P G
Sbjct: 478 PGPPGPTGDPGLPGDMGKKGEMGQPGPPGH--LGPAGPEG 515
>AB075863-1|BAB85569.1| 418|Homo sapiens KIAA1983 protein protein.
Length = 418
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGN-XPXGXAXPXG 1215
P P G PG PG G PG P PPG P G P G
Sbjct: 261 PGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGSMGPMG 301
>X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich protein
protein.
Length = 236
Score = 33.5 bits (73), Expect = 2.1
Identities = 37/134 (27%), Positives = 44/134 (32%), Gaps = 6/134 (4%)
Frame = -1
Query: 1464 PXXKXKTPXFQGG---KXXPXXGKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXP 1294
P K + P QGG + P GK GP P + G P G
Sbjct: 19 PPGKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 75
Query: 1293 GXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXXPXXXXXSPP--GGEP 1123
G PG P+ PP+ G PPPG P P PP G +P
Sbjct: 76 GPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPRKPQGPPPQGGNQP 135
Query: 1122 XXXXPPTGXXEXPP 1081
PP G + PP
Sbjct: 136 QGPPPPPGKPQGPP 149
>K03208-1|AAA60189.1| 251|Homo sapiens PRB2 protein.
Length = 251
Score = 33.5 bits (73), Expect = 2.1
Identities = 25/90 (27%), Positives = 29/90 (32%), Gaps = 4/90 (4%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXX 1162
G P G G PG P+ PP+ G PPPG P
Sbjct: 75 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGDNKSQGPPPPGKPQGPPPQGGSKSRSSRS 134
Query: 1161 PXXXXXSPP---GGEPXXXXPPTGXXEXPP 1081
P PP G +P PP G + PP
Sbjct: 135 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 164
Score = 32.7 bits (71), Expect = 3.6
Identities = 25/90 (27%), Positives = 29/90 (32%), Gaps = 4/90 (4%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXX 1162
G P G G PG P+ PP+ G PPPG P
Sbjct: 13 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARS 72
Query: 1161 PXXXXXSPP---GGEPXXXXPPTGXXEXPP 1081
P PP G +P PP G + PP
Sbjct: 73 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 102
>BC029485-1|AAH29485.1| 243|Homo sapiens C1q and tumor necrosis
factor related protein 5 protein.
Length = 243
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 1316 KXGXPGXPGEXXXRGXPGXPPPGN--XPXGXAXPXG 1215
+ G PG PGE G PG P P P G A P G
Sbjct: 55 RDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAG 90
>AY358383-1|AAQ88749.1| 243|Homo sapiens CTRP5 protein.
Length = 243
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 1316 KXGXPGXPGEXXXRGXPGXPPPGN--XPXGXAXPXG 1215
+ G PG PGE G PG P P P G A P G
Sbjct: 55 RDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAG 90
>AL110261-1|CAB53702.1| 219|Homo sapiens hypothetical protein
protein.
Length = 219
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 1316 KXGXPGXPGEXXXRGXPGXPPPGN--XPXGXAXPXG 1215
+ G PG PGE G PG P P P G A P G
Sbjct: 31 RDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAG 66
>AJ862823-2|CAH93522.1| 243|Homo sapiens C1Q TNF related protein 5
protein.
Length = 243
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 1316 KXGXPGXPGEXXXRGXPGXPPPGN--XPXGXAXPXG 1215
+ G PG PGE G PG P P P G A P G
Sbjct: 55 RDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAG 90
>AF329841-1|AAK17965.1| 243|Homo sapiens complement-c1q tumor
necrosis factor-related protein protein.
Length = 243
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 1316 KXGXPGXPGEXXXRGXPGXPPPGN--XPXGXAXPXG 1215
+ G PG PGE G PG P P P G A P G
Sbjct: 55 RDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAG 90
>BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII, alpha
1 protein.
Length = 1336
Score = 32.7 bits (71), Expect = 3.6
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -2
Query: 1382 PXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P + L + F P G PG PG G PG P PPG P G P G
Sbjct: 496 PGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPG--PPGREGPPG 550
>AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen middle
variant protein.
Length = 1516
Score = 32.7 bits (71), Expect = 3.6
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -2
Query: 1382 PXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P + L + F P G PG PG G PG P PPG P G P G
Sbjct: 676 PGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPG--PPGREGPPG 730
>AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen long
variant protein.
Length = 1751
Score = 32.7 bits (71), Expect = 3.6
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -2
Query: 1382 PXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P + L + F P G PG PG G PG P PPG P G P G
Sbjct: 911 PGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPG--PPGREGPPG 965
>AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen short
variant protein.
Length = 1336
Score = 32.7 bits (71), Expect = 3.6
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -2
Query: 1382 PXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P + L + F P G PG PG G PG P PPG P G P G
Sbjct: 496 PGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPG--PPGREGPPG 550
>AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collagen
protein.
Length = 1519
Score = 32.7 bits (71), Expect = 3.6
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -2
Query: 1382 PXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P + L + F P G PG PG G PG P PPG P G P G
Sbjct: 676 PGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPG--PPGREGPPG 730
>AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen protein.
Length = 1336
Score = 32.7 bits (71), Expect = 3.6
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -2
Query: 1382 PXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P + L + F P G PG PG G PG P PPG P G P G
Sbjct: 496 PGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPG--PPGREGPPG 550
>AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen protein.
Length = 1516
Score = 32.7 bits (71), Expect = 3.6
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -2
Query: 1382 PXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P + L + F P G PG PG G PG P PPG P G P G
Sbjct: 676 PGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPG--PPGREGPPG 730
>Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein.
Length = 755
Score = 32.3 bits (70), Expect = 4.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
G PG PGE +G G P P P G P
Sbjct: 490 GMPGMPGEKGEKGDTGLPGPQGIPGGVGSP 519
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 32.3 bits (70), Expect = 4.8
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXGXXXFQXIXXXXXPPXXXXRXG 1152
P P G PG GE +G PG PG G P G Q + PP + G
Sbjct: 452 PGGPGPQGPPGKNGEYGPQGPPGPTGPGG-DKGDTGPRGPQGLQGLPGTGGPPGENGKPG 510
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 collagen
protein.
Length = 1466
Score = 32.3 bits (70), Expect = 4.8
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXGXXXFQXIXXXXXPPXXXXRXG 1152
P P G PG GE +G PG PG G P G Q + PP + G
Sbjct: 599 PGGPGPQGPPGKNGETGPQGPPGPTGPGG-DKGDTGPPGPQGLQGLPGTGGPPGENGKPG 657
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 32.3 bits (70), Expect = 4.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 1224 PPGXVXLPXNXXXXXPPXXXXPXXXXXSPPGGEPXXXXPPTGXXEXPP 1081
PPG P PP P PPGG P PPTG P
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGP 274
>BC083495-1|AAH83495.1| 388|Homo sapiens COL14A1 protein protein.
Length = 388
Score = 32.3 bits (70), Expect = 4.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
G PG PGE +G G P P P G P
Sbjct: 107 GMPGMPGEKGEKGDTGLPGPQGIPGGVGSP 136
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 32.3 bits (70), Expect = 4.8
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXGXXXFQXIXXXXXPPXXXXRXG 1152
P P G PG GE +G PG PG G P G Q + PP + G
Sbjct: 599 PGGPGPQGPPGKNGETGPQGPPGPTGPGG-DKGDTGPPGPQGLQGLPGTGGPPGENGKPG 657
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 32.3 bits (70), Expect = 4.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 1224 PPGXVXLPXNXXXXXPPXXXXPXXXXXSPPGGEPXXXXPPTGXXEXPP 1081
PPG P PP P PPGG P PPTG P
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGP 274
>BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein.
Length = 759
Score = 32.3 bits (70), Expect = 4.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
G PG PGE +G G P P P G P
Sbjct: 478 GMPGMPGEKGEKGDTGLPGPQGIPGGVGSP 507
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, subunit
2, 66kDa protein.
Length = 464
Score = 32.3 bits (70), Expect = 4.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 1224 PPGXVXLPXNXXXXXPPXXXXPXXXXXSPPGGEPXXXXPPTGXXEXPP 1081
PPG P PP P PPGG P PPTG P
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGP 274
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, subunit
2, 66kDa protein.
Length = 464
Score = 32.3 bits (70), Expect = 4.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 1224 PPGXVXLPXNXXXXXPPXXXXPXXXXXSPPGGEPXXXXPPTGXXEXPP 1081
PPG P PP P PPGG P PPTG P
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGP 274
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 32.3 bits (70), Expect = 4.8
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXGXXXFQXIXXXXXPPXXXXRXG 1152
P P G PG GE +G PG PG G P G Q + PP + G
Sbjct: 599 PGGPGPQGPPGKNGETGPQGPPGPTGPGG-DKGDTGPPGPQGLQGLPGTGGPPGENGKPG 657
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 32.3 bits (70), Expect = 4.8
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXGXXXFQXIXXXXXPPXXXXRXG 1152
P P G PG GE +G PG PG G P G Q + PP + G
Sbjct: 599 PGGPGPQGPPGKNGETGPQGPPGPTGPGG-DKGDTGPPGPQGLQGLPGTGGPPGENGKPG 657
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 32.3 bits (70), Expect = 4.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 1224 PPGXVXLPXNXXXXXPPXXXXPXXXXXSPPGGEPXXXXPPTGXXEXPP 1081
PPG P PP P PPGG P PPTG P
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGP 274
>AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collagen
precursor variant protein.
Length = 1027
Score = 32.3 bits (70), Expect = 4.8
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKX-GXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
PR PK G PG PGE G G P P P G P G
Sbjct: 368 PRGPKGDPGLPGAPGERGIEGFRGPPGPQGDP-GVRGPAG 406
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 31.9 bits (69), Expect = 6.4
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG GE G PG PPG P G P G
Sbjct: 1200 PGPVGIPGLKGERGDPGSPGISPPG--PRGKKGPPG 1233
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain
protein.
Length = 1690
Score = 31.9 bits (69), Expect = 6.4
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG GE G PG PPG P G P G
Sbjct: 1200 PGPVGIPGLKGERGDPGSPGISPPG--PRGKKGPPG 1233
>M60832-1|AAA62822.1| 635|Homo sapiens alpha-2 type VIII collagen
protein.
Length = 635
Score = 31.9 bits (69), Expect = 6.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ G PG P P P G P G
Sbjct: 174 PGLDGLPGAPGDKGESGPPGVPGPRGEP-GAVGPKG 208
>BC126108-1|AAI26109.1| 957|Homo sapiens collagen, type XXI, alpha 1
protein.
Length = 957
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 583 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 612
>BC099645-1|AAH99645.1| 657|Homo sapiens COL8A2 protein protein.
Length = 657
Score = 31.9 bits (69), Expect = 6.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ G PG P P P G P G
Sbjct: 193 PGLDGLPGAPGDKGESGPPGVPGPRGEP-GAVGPKG 227
>BC096297-1|AAH96297.1| 657|Homo sapiens COL8A2 protein protein.
Length = 657
Score = 31.9 bits (69), Expect = 6.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ G PG P P P G P G
Sbjct: 193 PGLDGLPGAPGDKGESGPPGVPGPRGEP-GAVGPKG 227
>BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein.
Length = 162
Score = 31.9 bits (69), Expect = 6.4
Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = -1
Query: 1278 PGXPRXXPPREFXXXXGPPP--GXVXLPXNXXXXXPPXXXXPXXXXXSPP-GGEPXX-XX 1111
PG P PP+ GPPP G P P P PP GG P
Sbjct: 75 PGKPEGQPPQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLP 134
Query: 1110 PPTGXXEXPP 1081
PP G + PP
Sbjct: 135 PPAGKPQGPP 144
>BC045597-1|AAH45597.1| 480|Homo sapiens COL21A1 protein protein.
Length = 480
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 106 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 135
>AL713657-1|CAD28466.1| 417|Homo sapiens hypothetical protein
protein.
Length = 417
Score = 31.9 bits (69), Expect = 6.4
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXGXXXFQXIXXXXXPP 1173
G PG PG G PG P PPG G P G FQ + P
Sbjct: 187 GSPGKPGPQGSSGDPGPPGPPGK--EGLPGPQGPPGFQGLQGTVGEP 231
>AL513530-3|CAH73912.1| 954|Homo sapiens collagen type XXI alpha 1
protein.
Length = 954
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 580 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 609
>AL513530-2|CAH73913.1| 957|Homo sapiens collagen type XXI alpha 1
protein.
Length = 957
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 583 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 612
>AL138787-1|CAI22267.1| 703|Homo sapiens collagen type VIII alpha 2
protein.
Length = 703
Score = 31.9 bits (69), Expect = 6.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ G PG P P P G P G
Sbjct: 239 PGLDGLPGAPGDKGESGPPGVPGPRGEP-GAVGPKG 273
>AL034452-2|CAI22396.1| 954|Homo sapiens collagen type XXI alpha 1
protein.
Length = 954
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 580 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 609
>AL034452-1|CAI22395.1| 957|Homo sapiens collagen type XXI alpha 1
protein.
Length = 957
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 583 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 612
>AL031782-4|CAI22497.1| 954|Homo sapiens collagen type XXI alpha 1
protein.
Length = 954
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 580 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 609
>AL031782-3|CAI22496.1| 957|Homo sapiens collagen type XXI alpha 1
protein.
Length = 957
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 583 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 612
>AK074129-1|BAB84955.1| 705|Homo sapiens FLJ00201 protein protein.
Length = 705
Score = 31.9 bits (69), Expect = 6.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ G PG P P P G P G
Sbjct: 241 PGLDGLPGAPGDKGESGPPGVPGPRGEP-GAVGPKG 275
>AF438327-1|AAL86699.1| 957|Homo sapiens alpha 1 type XXI collagen
precursor protein.
Length = 957
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 583 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 612
>AF414088-1|AAL02227.1| 957|Homo sapiens collagen XXI protein.
Length = 957
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 583 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 612
>AF330693-1|AAL50033.1| 954|Homo sapiens alpha 1 chain-like collagen
COLA1L precursor protein.
Length = 954
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP-PGN 1245
P + G PG PG+ RG PG P PGN
Sbjct: 580 PGFKGEAGSPGAPGQDGTRGEPGIPGFPGN 609
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 31.9 bits (69), Expect = 6.4
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG GE G PG PPG P G P G
Sbjct: 1200 PGPVGIPGLKGERGDPGSPGISPPG--PRGKKGPPG 1233
>Z95116-3|CAI17988.1| 423|Homo sapiens protein ( Human DNA sequence
from clone CTA-57G9 on chromosome 22q12.1. ).
Length = 423
Score = 31.5 bits (68), Expect = 8.4
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P + G G PGE RG PG P PPG P G P G
Sbjct: 211 PGSPGRAGAVGTPGE---RGPPGPPGPPG--PPGPPAPVG 245
>X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein.
Length = 234
Score = 31.5 bits (68), Expect = 8.4
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
Frame = -1
Query: 1278 PGXPRXXPPREFXXXXGPP--PGXVXLP----XNXXXXXPPXXXXPXXXXXSPPGGEPXX 1117
PG P+ PP+ GPP PG P N PP P P GG
Sbjct: 20 PGKPQGPPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGPPPHPGKP--ERPPPQGGNQSQ 77
Query: 1116 XXPPT-GXXEXPP 1081
PPT G E PP
Sbjct: 78 GPPPTPGKPEGPP 90
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 chain
protein.
Length = 1685
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG G+ G PG P PPG P G + P G
Sbjct: 1103 PGLPGLPGTPGAKGQPGLPGFPGTPGPPG--PKGISGPPG 1140
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 chain
protein.
Length = 1691
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG G+ G PG P PPG P G + P G
Sbjct: 1103 PGLPGLPGTPGAKGQPGLPGFPGTPGPPG--PKGISGPPG 1140
>M63473-1|AAA51558.1| 762|Homo sapiens alpha-5 type IV collagen
protein.
Length = 762
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG G+ G PG P PPG P G + P G
Sbjct: 180 PGLPGLPGTPGAKGQPGLPGFPGTPGPPG--PKGISGPPG 217
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG G+ G PG P PPG P G + P G
Sbjct: 1022 PGLPGLPGTPGAKGQPGLPGFPGTPGPPG--PKGISGPPG 1059
>M31115-1|AAA52045.1| 772|Homo sapiens COL4A5 protein.
Length = 772
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG G+ G PG P PPG P G + P G
Sbjct: 190 PGLPGLPGTPGAKGQPGLPGFPGTPGPPG--PKGISGPPG 227
>K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary
proline-rich protein 1 gene, segment 1. ).
Length = 173
Score = 31.5 bits (68), Expect = 8.4
Identities = 25/90 (27%), Positives = 29/90 (32%), Gaps = 4/90 (4%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG-PPPGXVXLPXNXXXXXPPXXXX 1162
G P G G PG P+ PP+ G PPPG P
Sbjct: 17 GNPQGPPPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGKRSRSPRS 76
Query: 1161 PXXXXXSPP---GGEPXXXXPPTGXXEXPP 1081
P PP G +P PP G + PP
Sbjct: 77 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 106
>CR456407-1|CAG30293.1| 443|Homo sapiens bK984G1.1 protein.
Length = 443
Score = 31.5 bits (68), Expect = 8.4
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P + G G PGE RG PG P PPG P G P G
Sbjct: 231 PGSPGRAGAVGTPGE---RGPPGPPGPPG--PPGPPAPVG 265
>BC046358-1|AAH46358.1| 443|Homo sapiens EMI domain containing 1
protein.
Length = 443
Score = 31.5 bits (68), Expect = 8.4
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P + G G PGE RG PG P PPG P G P G
Sbjct: 231 PGSPGRAGAVGTPGE---RGPPGPPGPPG--PPGPPAPVG 265
>AL831910-1|CAD38573.1| 226|Homo sapiens hypothetical protein
protein.
Length = 226
Score = 31.5 bits (68), Expect = 8.4
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P + G G PGE RG PG P PPG P G P G
Sbjct: 143 PGSPGRAGAVGTPGE---RGPPGPPGPPG--PPGPPAPVG 177
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG G+ G PG P PPG P G + P G
Sbjct: 1103 PGLPGLPGTPGAKGQPGLPGFPGTPGPPG--PKGISGPPG 1140
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG G+ G PG P PPG P G + P G
Sbjct: 1103 PGLPGLPGTPGAKGQPGLPGFPGTPGPPG--PKGISGPPG 1140
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 31.5 bits (68), Expect = 8.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G PG G+ G PG P PPG P G + P G
Sbjct: 1103 PGLPGLPGTPGAKGQPGLPGFPGTPGPPG--PKGISGPPG 1140
>AL031186-3|CAI18002.1| 423|Homo sapiens protein ( Human DNA sequence
from clone CTA-984G1 on chromosome 22q12.1-12.2. ).
Length = 423
Score = 31.5 bits (68), Expect = 8.4
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P + G G PGE RG PG P PPG P G P G
Sbjct: 211 PGSPGRAGAVGTPGE---RGPPGPPGPPG--PPGPPAPVG 245
>AJ416090-1|CAC94777.1| 441|Homo sapiens putative emu1 protein
protein.
Length = 441
Score = 31.5 bits (68), Expect = 8.4
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P + G G PGE RG PG P PPG P G P G
Sbjct: 229 PGSPGRAGAVGTPGE---RGPPGPPGPPG--PPGPPAPVG 263
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,482,382
Number of Sequences: 237096
Number of extensions: 3657828
Number of successful extensions: 19400
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 4855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16179
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22690981476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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