Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_H08_e640_16.seq
(1524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 35 0.17
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 35 0.17
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.40
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 33 0.40
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.40
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.40
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.40
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 33 0.53
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 33 0.70
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 33 0.70
Z68009-4|CAA92006.1| 152|Caenorhabditis elegans Hypothetical pr... 33 0.70
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 33 0.70
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 33 0.70
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 33 0.70
M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein. 33 0.70
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 33 0.70
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 33 0.70
AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen prot... 32 0.93
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 32 0.93
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 32 1.2
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 32 1.2
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 32 1.2
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 32 1.2
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 32 1.2
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 32 1.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 1.6
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.6
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 31 2.1
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 31 2.1
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 31 2.8
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 31 2.8
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 31 2.8
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 31 2.8
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 2.8
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 31 2.8
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 2.8
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 31 2.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 2.8
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 31 2.8
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 31 2.8
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 31 2.8
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 2.8
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 2.8
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 2.8
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 31 2.8
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 2.8
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 31 2.8
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 31 2.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 2.8
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 30 3.8
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 3.8
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 30 3.8
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 30 3.8
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 3.8
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 30 3.8
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 5.0
L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen prote... 30 5.0
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 30 5.0
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 30 5.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 5.0
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 29 6.6
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 6.6
U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protei... 29 6.6
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 6.6
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 6.6
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 6.6
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 29 6.6
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 6.6
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 29 6.6
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 29 6.6
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 6.6
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.7
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 8.7
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 8.7
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 29 8.7
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 29 8.7
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 29 8.7
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 29 8.7
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 29 8.7
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 29 8.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 8.7
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 8.7
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 8.7
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 29 8.7
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 29 8.7
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical protein
F02D10.1 protein.
Length = 316
Score = 34.7 bits (76), Expect = 0.17
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P P G PG PG G PG P P P G + P
Sbjct: 161 PCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGP 197
Score = 29.1 bits (62), Expect = 8.7
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 1340 AXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
A P P G PG PG G P P G P G P G
Sbjct: 167 AGPPGPPGPDGTPGEPGGPGPAGSPAG-PSGPGPAGPPGPAG 207
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein 33
protein.
Length = 304
Score = 34.7 bits (76), Expect = 0.17
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
G PG PG+ G PG P G+ P G A P G
Sbjct: 162 GPPGAPGDAGTNGAPGA-PGGDAPPGEAGPKG 192
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P P G PG PG+ G PG P P G P G
Sbjct: 220 PGEPGPQGPPGPPGQAGPDGQPGAPGGPGTP-GSKGPPG 257
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical protein
B0024.2 protein.
Length = 297
Score = 33.5 bits (73), Expect = 0.40
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 1340 AXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXP 1239
A P P K G G PG RG G P PG P
Sbjct: 222 AGRPGQPGKQGSAGNPGRKGERGQDGQPGPGGRP 255
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 33.5 bits (73), Expect = 0.40
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXA 1227
P P G PG PG+ G PG P P G A
Sbjct: 238 PGQPGAPGAPGHPGQAGTPGTPGAPGNSGAPGGDA 272
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG G PG G P G A P G
Sbjct: 146 PGPAGTPGAPGAPGNAGAPGQDSFGGGP-GPAGPTG 180
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -2
Query: 1340 AXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
A P P + G G PG+ G PG P P P
Sbjct: 223 AGGPGQPGQSGGSGTPGQPGAPGAPGHPGQAGTPGTPGAP 262
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.40
Identities = 27/84 (32%), Positives = 27/84 (32%), Gaps = 4/84 (4%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXP--GXXXXPGXPRXXPPREFXXXXGPPP--GXVXLPXNXXXXXPPX 1171
G P P G P G P PR PP PPP G P PP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP----TGSLPPPQAGGSPPPAGTGSPPPPP 333
Query: 1170 XXXPXXXXXSPPGGEPXXXXPPTG 1099
SPP G P PPTG
Sbjct: 334 RQKRQAPERSPPTGSPPTGSPPTG 357
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/88 (29%), Positives = 26/88 (29%), Gaps = 2/88 (2%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXGPPPGXVXLPXNXXXXXPPXXXXP 1159
G P P G P P P PP PPP P PP P
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP-----PPPPPRGSP 307
Query: 1158 XXXXXSPP--GGEPXXXXPPTGXXEXPP 1081
PP GG P PP G PP
Sbjct: 308 PTGSLPPPQAGGSP----PPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.40
Identities = 27/84 (32%), Positives = 27/84 (32%), Gaps = 4/84 (4%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXP--GXXXXPGXPRXXPPREFXXXXGPPP--GXVXLPXNXXXXXPPX 1171
G P P G P G P PR PP PPP G P PP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP----TGSLPPPQAGGSPPPAGTGSPPPPP 354
Query: 1170 XXXPXXXXXSPPGGEPXXXXPPTG 1099
SPP G P PPTG
Sbjct: 355 RQKRQAPERSPPTGSPPTGSPPTG 378
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/88 (29%), Positives = 26/88 (29%), Gaps = 2/88 (2%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXGPPPGXVXLPXNXXXXXPPXXXXP 1159
G P P G P P P PP PPP P PP P
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP-----PPPPPRGSP 328
Query: 1158 XXXXXSPP--GGEPXXXXPPTGXXEXPP 1081
PP GG P PP G PP
Sbjct: 329 PTGSLPPPQAGGSP----PPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.40
Identities = 27/84 (32%), Positives = 27/84 (32%), Gaps = 4/84 (4%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXP--GXXXXPGXPRXXPPREFXXXXGPPP--GXVXLPXNXXXXXPPX 1171
G P P G P G P PR PP PPP G P PP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP----TGSLPPPQAGGSPPPAGTGSPPPPP 339
Query: 1170 XXXPXXXXXSPPGGEPXXXXPPTG 1099
SPP G P PPTG
Sbjct: 340 RQKRQAPERSPPTGSPPTGSPPTG 363
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/88 (29%), Positives = 26/88 (29%), Gaps = 2/88 (2%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXGPPPGXVXLPXNXXXXXPPXXXXP 1159
G P P G P P P PP PPP P PP P
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP-----PPPPPRGSP 313
Query: 1158 XXXXXSPP--GGEPXXXXPPTGXXEXPP 1081
PP GG P PP G PP
Sbjct: 314 PTGSLPPPQAGGSP----PPAGTGSPPP 337
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein 139
protein.
Length = 310
Score = 33.1 bits (72), Expect = 0.53
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P G PG PG G PG P P P G P
Sbjct: 172 PGAPGKPGAPGVGGGSGAPGAPGPKGAPGGPGQP 205
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical protein
F54D1.3 protein.
Length = 310
Score = 32.7 bits (71), Expect = 0.70
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXR--GXPGXP-PPGNXPXGXAXPXGXXXF 1203
P P + G PG PG R G PG P PGN G A P G F
Sbjct: 210 PGFPGQDGAPGQPGADGQRGAGTPGAPGAPGN--AGPAGPSGQDGF 253
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical protein
F54D1.2 protein.
Length = 294
Score = 32.7 bits (71), Expect = 0.70
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXR--GXPGXP-PPGNXPXGXAXPXGXXXF 1203
P P + G PG PG R G PG P PGN G A P G F
Sbjct: 194 PGFPGQDGAPGQPGADGQRGAGTPGAPGAPGN--AGPAGPSGQDGF 237
>Z68009-4|CAA92006.1| 152|Caenorhabditis elegans Hypothetical protein
R09A8.4 protein.
Length = 152
Score = 32.7 bits (71), Expect = 0.70
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = -1
Query: 1407 GKKGGP-F*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXX 1231
G++G P P G G P + GV G G PG P P+ F
Sbjct: 37 GREGSPGAQGAPGDMGMMGEAGKEGEKGAPGREGVRGEKGPSGPPGLPGLVGPKGFSGNS 96
Query: 1230 GPP 1222
GPP
Sbjct: 97 GPP 99
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein 20
protein.
Length = 288
Score = 32.7 bits (71), Expect = 0.70
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP----PPGNXPXGXAXPXG 1215
P P + G PG PGE G PG P PPG P G P G
Sbjct: 213 PGEPGQPGEPGGPGEPGADGRPGHPGRAGPPG--PPGDNGPNG 253
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein 145
protein.
Length = 294
Score = 32.7 bits (71), Expect = 0.70
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXR--GXPGXP-PPGNXPXGXAXPXGXXXF 1203
P P + G PG PG R G PG P PGN G A P G F
Sbjct: 194 PGTPGQDGFPGQPGADGQRGSGAPGAPGAPGN--AGPAGPAGQDGF 237
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 2 protein.
Length = 380
Score = 32.7 bits (71), Expect = 0.70
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P + G G PGE G PG P PG P G P G
Sbjct: 258 PGEDGYAGTPGEKGWPGPPGAPGPGGMP-GPNGPTG 292
>M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein.
Length = 168
Score = 32.7 bits (71), Expect = 0.70
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXP--PPGNXPXGXAXPXG 1215
P G PG PG G PG P P G P G P G
Sbjct: 128 PGPAGVPGQPGPKGPNGNPGAPAQPGGQGPPGPPGPAG 165
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 32.7 bits (71), Expect = 0.70
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P + G G PGE G PG P PG P G P G
Sbjct: 258 PGEDGYAGTPGEKGWPGPPGAPGPGGMP-GPNGPTG 292
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.70
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = -2
Query: 1340 AXXPRXPK-KXGXPGXPGEXXXRGXPGXP----PPGNXPXGXAXPXG 1215
A P+ P G PG PG+ RG PG P P G+ P G + P G
Sbjct: 171 APGPQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPGPSGPPG 217
>AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen protein
55 protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.93
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXA 1227
G PG PG+ +G PG P P G A
Sbjct: 153 GAPGQPGQAGAQGTPGAPGNSGSPGGDA 180
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen protein
112 protein.
Length = 297
Score = 32.3 bits (70), Expect = 0.93
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP--PPGNXPXGXAXPXG 1215
P P G PG PGE +G PG P P N G P G
Sbjct: 207 PSEPLVPGEPGAPGEAGPQGPPGQPGTPGQNGQPGQPGPKG 247
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGN-XPXGXAXPXG 1215
P P + G PG PG G PG P GN P G A G
Sbjct: 231 PGTPGQNGQPGQPGPKGPSGQPGQPGSDGNPGPAGQAGQAG 271
Score = 29.5 bits (63), Expect = 6.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPP 1254
P K G PG PG G PG PP
Sbjct: 109 PGKPGRPGKPGVAGLPGNPGRPP 131
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical protein
C09G5.4 protein.
Length = 323
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNX--PXGXAXPXGXXXFQXIXXXXXPPXXXXRXGX 1149
P G PG PG G PG P G P G P G P R G
Sbjct: 140 PGPAGAPGAPGPQGPNGQPGHPGQGGSQGPAGPRGPAGDAGAPGQVGAPGNPGQAGRGGQ 199
Query: 1148 XFH 1140
H
Sbjct: 200 RSH 202
>Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical protein
C09G5.3 protein.
Length = 283
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P K G PG G G PG P PG G A P G
Sbjct: 174 PGKSGAPGGKGPQGPPGTPGRPGQPGRKAIGEAGPKG 210
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXGXXXFQ 1200
P P + G PG GE G PG P PG G P G Q
Sbjct: 1239 PGQPGQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQ 1283
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXP 1239
P P + G PG PG+ +G PG P P
Sbjct: 1074 PGQPGEKGLPGIPGKAGRQGAPGSPGQDGLP 1104
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 1406 GKKGAXFXPXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP 1257
G KG P L L Q P P G PG G+ G PG P
Sbjct: 798 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTP 847
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXGXXXFQ 1200
P P + G PG GE G PG P PG G P G Q
Sbjct: 1238 PGQPGQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQ 1282
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXP 1239
P P + G PG PG+ +G PG P P
Sbjct: 1073 PGQPGEKGLPGIPGKAGRQGAPGSPGQDGLP 1103
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 1406 GKKGAXFXPXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP 1257
G KG P L L Q P P G PG G+ G PG P
Sbjct: 797 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTP 846
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P P G G PG G PG P PPG P G A P G
Sbjct: 195 PGRPGPAGPRGEPGTEYKPGQPGRPGPPG--PRGEAGPAG 232
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXGXXXFQ 1200
P P + G PG GE G PG P PG G P G Q
Sbjct: 1238 PGQPGQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQ 1282
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXP 1239
P P + G PG PG+ +G PG P P
Sbjct: 1073 PGQPGEKGLPGIPGKAGRQGAPGSPGQDGLP 1103
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 1406 GKKGAXFXPXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP 1257
G KG P L L Q P P G PG G+ G PG P
Sbjct: 797 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTP 846
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXGXXXFQ 1200
P P + G PG GE G PG P PG G P G Q
Sbjct: 1239 PGQPGQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQ 1283
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXP 1239
P P + G PG PG+ +G PG P P
Sbjct: 1074 PGQPGEKGLPGIPGKAGRQGAPGSPGQDGLP 1104
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 1406 GKKGAXFXPXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP 1257
G KG P L L Q P P G PG G+ G PG P
Sbjct: 798 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTP 847
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXGXXXFQ 1200
P P + G PG GE G PG P PG G P G Q
Sbjct: 1275 PGQPGQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQ 1319
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXP 1239
P P + G PG PG+ +G PG P P
Sbjct: 1110 PGQPGEKGLPGIPGKAGRQGAPGSPGQDGLP 1140
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 1406 GKKGAXFXPXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXP 1257
G KG P L L Q P P G PG G+ G PG P
Sbjct: 834 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTP 883
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical protein
F23H12.4 protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXP 1221
P P G PG PG+ G PG P PG P P
Sbjct: 104 PGPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEP 141
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGX-PPPGN-XPXGXAXPXG 1215
P P G PG PGE G PG PG+ P G P G
Sbjct: 155 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAG 195
Score = 29.9 bits (64), Expect = 5.0
Identities = 24/83 (28%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXP-RXXPPREFXXXXGP-PPGXVXLPXNXXXXXPPXXX 1165
G P + G G PG PG P PP P P G P P
Sbjct: 162 GAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPG 221
Query: 1164 XPXXXX-XSPPG--GEPXXXXPP 1105
P PPG G P PP
Sbjct: 222 EPGDSGPPGPPGPPGAPGNDGPP 244
Score = 29.1 bits (62), Expect = 8.7
Identities = 31/98 (31%), Positives = 34/98 (34%), Gaps = 3/98 (3%)
Frame = -1
Query: 1407 GKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG 1228
G+ G P P G C TP P K G PG PG P P E G
Sbjct: 120 GRPGAP--GTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAP--GDPGE----AG 171
Query: 1227 PP--PGXVXLPXNXXXXXPPXXXXPXXXXXSP-PGGEP 1123
P PG P + PP P +P P GEP
Sbjct: 172 TPGRPGTDAAPGSPGPRGPP---GPAGEAGAPGPAGEP 206
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical protein
C53B4.5 protein.
Length = 289
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP 1254
P P + G PG PG G PG PP
Sbjct: 98 PGTPGRAGRPGKPGAPGLNGNPGRPP 123
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical protein
F17C8.2 protein.
Length = 296
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPP--GNXPXGXAXPXG 1215
G PG PG+ G PG P P + P G A P G
Sbjct: 168 GQPGAPGDAGKDGPPGPPGPDGDSGPNGEAGPNG 201
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXP 1221
P P G PG PG+ G PG P PG P P
Sbjct: 99 PGPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEP 136
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGX-PPPGN-XPXGXAXPXG 1215
P P G PG PGE G PG PG+ P G P G
Sbjct: 150 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAG 190
Score = 29.9 bits (64), Expect = 5.0
Identities = 24/83 (28%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXP-RXXPPREFXXXXGP-PPGXVXLPXNXXXXXPPXXX 1165
G P + G G PG PG P PP P P G P P
Sbjct: 157 GAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPG 216
Query: 1164 XPXXXX-XSPPG--GEPXXXXPP 1105
P PPG G P PP
Sbjct: 217 EPGDSGPPGPPGPPGAPGNDGPP 239
Score = 29.1 bits (62), Expect = 8.7
Identities = 31/98 (31%), Positives = 34/98 (34%), Gaps = 3/98 (3%)
Frame = -1
Query: 1407 GKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG 1228
G+ G P P G C TP P K G PG PG P P E G
Sbjct: 115 GRPGAP--GTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAP--GDPGE----AG 166
Query: 1227 PP--PGXVXLPXNXXXXXPPXXXXPXXXXXSP-PGGEP 1123
P PG P + PP P +P P GEP
Sbjct: 167 TPGRPGTDAAPGSPGPRGPP---GPAGEAGAPGPAGEP 201
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 1 (col-1) gene, complete cds. ).
Length = 296
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXP 1221
P P G PG PG+ G PG P PG P P
Sbjct: 99 PGPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEP 136
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGX-PPPGN-XPXGXAXPXG 1215
P P G PG PGE G PG PG+ P G P G
Sbjct: 150 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAG 190
Score = 29.9 bits (64), Expect = 5.0
Identities = 24/83 (28%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXP-RXXPPREFXXXXGP-PPGXVXLPXNXXXXXPPXXX 1165
G P + G G PG PG P PP P P G P P
Sbjct: 157 GAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPG 216
Query: 1164 XPXXXX-XSPPG--GEPXXXXPP 1105
P PPG G P PP
Sbjct: 217 EPGDSGPPGPPGPPGAPGNDGPP 239
Score = 29.1 bits (62), Expect = 8.7
Identities = 31/98 (31%), Positives = 34/98 (34%), Gaps = 3/98 (3%)
Frame = -1
Query: 1407 GKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG 1228
G+ G P P G C TP P K G PG PG P P E G
Sbjct: 115 GRPGAP--GTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAP--GDPGE----AG 166
Query: 1227 PP--PGXVXLPXNXXXXXPPXXXXPXXXXXSP-PGGEP 1123
P PG P + PP P +P P GEP
Sbjct: 167 TPGRPGTDAAPGSPGPRGPP---GPAGEAGAPGPAGEP 201
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical protein
F52B11.4 protein.
Length = 304
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -2
Query: 1340 AXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
A P P G PG PG+ G PG P P P
Sbjct: 234 AGSPGAPGGPGQPGAPGQKGPSGAPGQPGADGNPGAPGQP 273
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 109 AAGPAGTPGKPGRPGRPGAAGLPGNPGRPP 138
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P+ P G PG PG G PG P G+ G P G
Sbjct: 154 PQGP--AGAPGAPGPQGDAGAPGAPGQGSG-AGAPGPAG 189
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 31.1 bits (67), Expect = 2.1
Identities = 23/80 (28%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXGPPPGXVXLPXNXXXXXPPXXXXP 1159
G T P G G PG PG P P+ G PPG P
Sbjct: 189 GPTGAPGDKGSRGYPGESGEPGTPGSAGPKGNAGPAG-PPGPPGYPGRPGETGDHGKTIA 247
Query: 1158 XXXXXSPPG--GEPXXXXPP 1105
PPG GE PP
Sbjct: 248 GEAPPGPPGRQGEMGPQGPP 267
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical protein
W05B2.6 protein.
Length = 304
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 109 AAGPAGTPGKPGRPGRPGAAGLPGNPGRPP 138
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical protein
W05B2.5 protein.
Length = 304
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 109 AAGPAGTPGKPGRPGRPGAAGLPGNPGRPP 138
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical protein
W05B2.1 protein.
Length = 304
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 109 AAGPAGTPGKPGRPGRPGAAGLPGNPGRPP 138
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical protein
T21B4.2 protein.
Length = 312
Score = 30.7 bits (66), Expect = 2.8
Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 6/87 (6%)
Frame = -1
Query: 1347 FCXGXTPXPQ-KXGVXGXPGXXXXPGXPRXXPPREFXXXXGPP-----PGXVXLPXNXXX 1186
FC P P G G PG PG P P GPP PG P
Sbjct: 165 FCFDCPPGPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGN 224
Query: 1185 XXPPXXXXPXXXXXSPPGGEPXXXXPP 1105
P PP G P PP
Sbjct: 225 PGAPGAVTEVPGQQGPP-GPPGPAGPP 250
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P P G PG PG+ G PG PGN G + P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGA--PGNPGKGASAP 138
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 1310 GXPGXPGE--XXXRGXPGXPPPGNXPXGXAXPXG 1215
G PG PGE +G PG P P P G A P G
Sbjct: 201 GAPGGPGEPGASEQGGPGEPGPAG-PPGPAGPAG 233
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical protein
T05A1.2 protein.
Length = 300
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 1316 KXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
K G PG PG+ RG PG P P P
Sbjct: 239 KDGAPGSPGQPGPRGGPGEPGQDGAPGQPGLP 270
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXP 1239
A P P G PG PG+ G PG P P
Sbjct: 242 APGSPGQPGPRGGPGEPGQDGAPGQPGLPGSDGTP 276
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P P G PG PG+ G PG PGN G + P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGA--PGNPGKGASAP 138
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 1310 GXPGXPGE--XXXRGXPGXPPPGNXPXGXAXPXG 1215
G PG PGE +G PG P P P G A P G
Sbjct: 201 GAPGGPGEPGASEQGGPGEPGPAG-PPGPAGPAG 233
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein 73
protein.
Length = 285
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXP-PPGNX-PXGXAXPXG 1215
P G PG PGE +G PG PGN P G P G
Sbjct: 207 PAPPGNPGQPGEPGAQGPPGEDGRPGNSGPQGPPGPQG 244
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP--PPGNXPXGXAXPXG 1215
P+ P G PG PGE G PG P P P G A G
Sbjct: 154 PKGPP--GQPGAPGEQGPNGRPGAPGAPGPQGPPGTAGNDG 192
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein 43
protein.
Length = 303
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXP 1221
P P G PG PG+ G PG P PG P P
Sbjct: 106 PGPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEP 143
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPG-XPPPGNXPXGXAXPXG 1215
P P + G PG PG G PG PPG P G A G
Sbjct: 166 PGDPGEAGTPGRPGTDATPGLPGPRGPPG--PPGEAGQPG 203
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein 10
protein.
Length = 294
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXR--GXPGXP-PPGNXPXGXAXPXG 1215
P + G PG PG+ R G PG P PGN G A P G
Sbjct: 197 PGQDGQPGAPGQDGQRGSGAPGGPGAPGN--AGPAGPAG 233
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein 144
protein.
Length = 306
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXR--GXPGXP-PPGNXPXGXAXPXG 1215
P + G PG PG+ R G PG P PGN G A P G
Sbjct: 209 PGQDGQPGAPGQDGQRGSGAPGGPGAPGN--AGPAGPAG 245
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein 110
protein.
Length = 304
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXP 1221
P P G PG G G PG P PG P G P
Sbjct: 105 PGAPGPSGTPGRHGRHGAPGAPGRPGNPGEPPRGPCDP 142
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.7 bits (66), Expect = 2.8
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = -1
Query: 1302 GXPGXXXXPGXPRXX-PPREFXXXXGPPPGXVXLPXNXXXXXPPXX-XXPXXXXXSPPGG 1129
G PG G P PP F PP G P N P P +PP G
Sbjct: 165 GPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSG 224
Query: 1128 EPXXXXPPTG 1099
P P+G
Sbjct: 225 GPPGPFNPSG 234
Score = 30.7 bits (66), Expect = 2.8
Identities = 32/115 (27%), Positives = 34/115 (29%), Gaps = 4/115 (3%)
Frame = -1
Query: 1431 GGKXXPXXGKKGGPF*--XXPXXFGXTNXXFCXGXTPXPQKXGVXGXPGXXXXPGXPRXX 1258
G P G GPF P G T G P G PG G P
Sbjct: 186 GPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPS------GGPPGPFNPSGAPPSG 239
Query: 1257 -PPREFXXXXGPPPGXVXLPXNXXXXXPPXX-XXPXXXXXSPPGGEPXXXXPPTG 1099
PP F PP G P N P P +PP G P P+G
Sbjct: 240 GPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG 294
Score = 29.9 bits (64), Expect = 5.0
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = -1
Query: 1302 GXPGXXXXPGXPRXX-PPREFXXXXGPPPGXVXLPXNXXXXXPPXX-XXPXXXXXSPPGG 1129
G PG G P PP F PP G P N P P +PP G
Sbjct: 315 GPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 374
Query: 1128 EPXXXXPPTG 1099
P P+G
Sbjct: 375 GPPGPFDPSG 384
Score = 29.5 bits (63), Expect = 6.6
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = -1
Query: 1302 GXPGXXXXPGXPRXX-PPREFXXXXGPPPGXVXLPXNXXXXXPPXX-XXPXXXXXSPPGG 1129
G PG G P PP F PP G P N P P +PP G
Sbjct: 375 GPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 434
Query: 1128 EPXXXXPPTG 1099
P P+G
Sbjct: 435 GPPGPFNPSG 444
Score = 29.5 bits (63), Expect = 6.6
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = -1
Query: 1302 GXPGXXXXPGXPRXX-PPREFXXXXGPPPGXVXLPXNXXXXXPPXX-XXPXXXXXSPPGG 1129
G PG G P PP F PP G P N P P +PP G
Sbjct: 405 GPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 464
Query: 1128 EPXXXXPPTG 1099
P P+G
Sbjct: 465 GPPGPFNPSG 474
Score = 29.5 bits (63), Expect = 6.6
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = -1
Query: 1302 GXPGXXXXPGXPRXX-PPREFXXXXGPPPGXVXLPXNXXXXXPPXX-XXPXXXXXSPPGG 1129
G PG G P PP F PP G P N P P +PP G
Sbjct: 435 GPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 494
Query: 1128 EPXXXXPPTG 1099
P P+G
Sbjct: 495 GPPGPFNPSG 504
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P P G PG PG+ G PG PGN G + P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGA--PGNPGKGASAP 138
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 1310 GXPGXPGE--XXXRGXPGXPPPGNXPXGXAXPXG 1215
G PG PGE +G PG P P P G A P G
Sbjct: 201 GAPGGPGEPGASEQGGPGEPGPAG-PPGPAGPAG 233
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P P G PG PG+ G PG PGN G + P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGA--PGNPGKGASAP 138
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 1310 GXPGXPGE--XXXRGXPGXPPPGNXPXGXAXPXG 1215
G PG PGE +G PG P P P G A P G
Sbjct: 201 GAPGGPGEPGASEQGGPGEPGPAG-PPGPAGPAG 233
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 93 AAGPAGTPGKPGRPGRPGAAGLPGNPGRPP 122
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
++ P P G PG PG G PG P P P
Sbjct: 217 SSGAPGAPGGPGFPGAPGSKGPSGAPGQPGANGNPGAPGQP 257
Score = 29.1 bits (62), Expect = 8.7
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Frame = -2
Query: 1406 GKKGAXFXPXLXXLAXQ--IXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXG 1233
G++GA P Q + + P P + G G PG G PG P P G
Sbjct: 176 GQRGAPGHPGQAGAPGQPGVDAQSQSTPGAPGQAGPQGPPGSSGAPGAPGGPGFPGAP-G 234
Query: 1232 XAXPXG 1215
P G
Sbjct: 235 SKGPSG 240
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 2.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP 1254
P P G PG PG G PG PP
Sbjct: 100 PGTPGSAGRPGKPGAPGLNGNPGRPP 125
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG G PG P P G P G
Sbjct: 115 PGGPGTPGGPGNPGGLGGPGNPGGPGTPGGPGTPGG 150
Score = 29.1 bits (62), Expect = 8.7
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXP 1221
P G PG PG G PG P PGN P G P
Sbjct: 100 PGGPGNPGGPGGLGTPGGPGTPGGPGN-PGGLGGP 133
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXP-GXPPPGNXPXGXAXPXG 1215
P P G PG PG G P G PGN P G P G
Sbjct: 106 PGGPGGLGTPGGPGTPGGPGNPGGLGGPGN-PGGPGTPGG 144
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
G PG PG G PG P P G P G
Sbjct: 31 GGPGTPGGPGTPGGPGTPGGPGTPGGLGTPGG 62
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG G PG P P G P G
Sbjct: 33 PGTPGGPGTPGGPGTPGGPGTPGGLGTPGGPGTPGG 68
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen protein.
Length = 303
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXP 1221
P P G PG PG+ G PG P PG P P
Sbjct: 106 PGPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEP 143
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPG-XPPPGNXPXGXAXPXG 1215
P P + G PG PG G PG PPG P G A G
Sbjct: 166 PGDPGEAGTPGRPGTDATPGLPGPRGPPG--PPGEAGQPG 203
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical protein
Y41E3.2 protein.
Length = 289
Score = 30.3 bits (65), Expect = 3.8
Identities = 29/103 (28%), Positives = 30/103 (29%), Gaps = 2/103 (1%)
Frame = -1
Query: 1407 GKKGGPF*XXPXXFGXTNXXFCXGXTPXPQKXGVXGXPGXXXXPGXPRXXPPREFXXXXG 1228
GK G P P G C TP P + G PG PG P P G
Sbjct: 108 GKPGAP--GQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGPKG 165
Query: 1227 P--PPGXVXLPXNXXXXXPPXXXXPXXXXXSPPGGEPXXXXPP 1105
P PG PP SP EP PP
Sbjct: 166 PDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPP 208
Score = 29.5 bits (63), Expect = 6.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPP 1254
P K G PG PG G PG PP
Sbjct: 101 PGKPGKPGKPGAPGQPGTPGRPP 123
Score = 29.5 bits (63), Expect = 6.6
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPG 1248
P P G PG PGE G PG P PG
Sbjct: 232 PGAPGAKGEPGTPGEPGKDGEPGKPGTPG 260
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical protein
ZK1010.7 protein.
Length = 298
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPP 1254
P K G PG PG G PG PP
Sbjct: 111 PGKNGAPGRPGAPGAPGFPGRPP 133
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical protein
C15A11.6 protein.
Length = 316
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPP--GNXPXGXAXPXG 1215
P G PG PG G PG P G P G P G
Sbjct: 141 PGPAGAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAG 178
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
G G PG G PG P GN P G A P G
Sbjct: 207 GPSGAPGSQGPPGAPGQPGSGNAP-GPAGPPG 237
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical protein
T06E4.4 protein.
Length = 290
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXA 1227
G PG PG G PG P P G A
Sbjct: 235 GAPGGPGNAGTPGTPGAPGNAGAPGGDA 262
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG G PG G P G A P G
Sbjct: 136 PGPAGAPGAPGPQGPSGAPGQDAVGGGP-GPAGPQG 170
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 3 protein.
Length = 302
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPP--GNXPXG 1233
P K G PG PG+ +G G P P G P G
Sbjct: 248 PGKAGPPGLPGDPGEKGSDGLPGPHGGTGPRG 279
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P G PG PGE G PG P P P P
Sbjct: 153 PGDIGQPGNPGERGMDGEPGPPGPTGPPGEPGLP 186
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = -2
Query: 1406 GKKGAXFXPXLXXLAXQIXXFAAXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXA 1227
G +G P + A P P G G PG+ G PG P P P
Sbjct: 187 GAQGITGQPGVNAEPVAYRAGAPGPPGEPGPPGAHGDPGDLGEEGPPGLPGPKGPPGASG 246
Query: 1226 XP 1221
P
Sbjct: 247 IP 248
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen protein
143 protein.
Length = 319
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPP--GNXPXGXAXPXG 1215
P G PG PG G PG P G P G P G
Sbjct: 139 PGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAG 176
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen protein
142 protein.
Length = 325
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPP--GNXPXGXAXPXG 1215
P G PG PG G PG P G P G P G
Sbjct: 139 PGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAG 176
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPP 1254
P P + G PG PG G PG PP
Sbjct: 101 PGLPGRNGKPGVPGAPGRPGTPGRPP 126
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXPXG 1215
P G PG G+ G PG P PPGN G A P G
Sbjct: 222 PGDDGAPGRDGQPGQSGPPGPPGPPGN--VGEAGPPG 256
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical protein
F33A8.9 protein.
Length = 346
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -1
Query: 1323 PQKXGVXGXPGXXXXPGXPRXXPPREFXXXXGP--PPGXVXLPXNXXXXXP 1177
P + G G PG G P P+ F GP PPG P N P
Sbjct: 204 PARSGPPGPPGPKGPRGTPGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGP 254
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical protein
C15A11.5 protein.
Length = 316
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPP--GNXPXGXAXPXG 1215
P G PG PG G PG P G P G P G
Sbjct: 141 PGPAGVPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAG 178
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
G G PG G PG P GN P G A P G
Sbjct: 207 GPSGAPGPQGPPGAPGQPGSGNAP-GPAGPPG 237
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical protein
T11F9.9 protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 104 AAGPAGTPGKPGRPGKPGAPGLPGNPGRPP 133
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical protein
F55C10.3 protein.
Length = 266
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 71 AAGPAGTPGKPGRPGKPGAPGLPGNPGHPP 100
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical protein
F55C10.2 protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 104 AAGPAGTPGKPGRPGKPGAPGLPGNPGRPP 133
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical protein
T06E4.6 protein.
Length = 290
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG G PG G P G A P G
Sbjct: 136 PGPAGAPGAPGPQGPSGAPGQDAVGEGP-GPAGPQG 170
Score = 29.1 bits (62), Expect = 8.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXA 1227
G PG PG+ G PG P P G A
Sbjct: 235 GAPGGPGQPGQDGQPGAPGNDGAPGGDA 262
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical protein
C29F4.1 protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 104 AAGPAGTPGKPGRPGKPGAPGLPGNPGRPP 133
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.6 protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 104 AAGPAGTPGKPGRPGKPGAPGLPGNPGRPP 133
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 104 AAGPAGTPGKPGRPGKPGAPGLPGNPGRPP 133
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical protein
T11B7.3b protein.
Length = 273
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = -2
Query: 1340 AXXPRXPKKXGXPGXPGE--XXXRGXPGXP-PPG 1248
A P P + G PG PG RG PG P PPG
Sbjct: 187 AGAPGAPGQDGAPGHPGADGQRQRGQPGPPGPPG 220
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical protein
T11B7.3a protein.
Length = 297
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = -2
Query: 1340 AXXPRXPKKXGXPGXPGE--XXXRGXPGXP-PPG 1248
A P P + G PG PG RG PG P PPG
Sbjct: 187 AGAPGAPGQDGAPGHPGADGQRQRGQPGPPGPPG 220
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical protein
F38A3.1 protein.
Length = 306
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P + G PG PGE R PG P P P P
Sbjct: 212 PGQDGQPGQPGE--SREVPGAPGPAGQPGSQGEP 243
Score = 29.1 bits (62), Expect = 8.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP 1257
P P + G PG PG+ G PG P
Sbjct: 252 PGQPGQAGQPGGPGDAGNDGQPGQP 276
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical protein
C09G5.5 protein.
Length = 317
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPP--PGNXPXGXAXPXG 1215
P G PG PG G PG P G P G P G
Sbjct: 139 PGPAGAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAG 176
>L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen protein 90
protein.
Length = 305
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP 1257
P P K G PG GE +G PG P
Sbjct: 222 PGLPGKHGEPGQDGEEGPKGAPGTP 246
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 104 AAGPAGTPGKPGRPGKPGAPGLPGNPGRPP 133
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1343 AAXXPRXPKKXGXPGXPGEXXXRGXPGXPP 1254
AA P K G PG PG G PG PP
Sbjct: 104 AAGPAGTPGKPGRPGKPGAPGLPGNPGRPP 133
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGX----PPPGNXPXGXAXPXG 1215
P P G PG PG+ G PG P G P G P G
Sbjct: 219 PGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPG 261
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical protein
C50B6.4 protein.
Length = 291
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 1340 AXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
A P P + G PG PG+ R G P P G A P G
Sbjct: 177 AGAPGAPGQDGQPGAPGQDGQRST-GTPGAAGAP-GPAGPAG 216
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical protein
F38A3.2 protein.
Length = 306
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
G PG PG G PG P P P G G
Sbjct: 186 GQPGAPGNAGAAGAPGAPGPAG-PDGQPGSTG 216
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein 34
protein.
Length = 299
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXP 1221
P P G PG PG G PG P PG P P
Sbjct: 102 PGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEP 139
>U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protein 174
protein.
Length = 314
Score = 29.5 bits (63), Expect = 6.6
Identities = 28/105 (26%), Positives = 29/105 (27%), Gaps = 6/105 (5%)
Frame = -1
Query: 1401 KGGPF*XXPXXFGXTNXXFCXGXTPXPQ-KXGVXGXPGXXXXPGXPRXXPPREFXXXXGP 1225
K GP P N +C P P G G G PG P P GP
Sbjct: 150 KDGP--DGPAATPAPNYDWCFDCPPGPPGPAGSAGVKGPSGNPGAPGTDGPAGNKGGQGP 207
Query: 1224 P-----PGXVXLPXNXXXXXPPXXXXPXXXXXSPPGGEPXXXXPP 1105
P PG P N P P G P PP
Sbjct: 208 PGNAGAPGANGNPGNAGTPGIPGKTIEVPAPAG-PAGAPGPAGPP 251
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXP 1221
P P G PG PG G PG P PG P P
Sbjct: 102 PGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEP 139
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 29.5 bits (63), Expect = 6.6
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
G PG PG+ PG P P P P
Sbjct: 226 GAPGAPGQSGGSALPGPPGPAGSPGRSGQP 255
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 29.5 bits (63), Expect = 6.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPP 1254
P K G PG PG G PG PP
Sbjct: 121 PGKPGRPGRPGAGGLPGNPGRPP 143
Score = 29.1 bits (62), Expect = 8.7
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P P G PG PG+ G PG P P P
Sbjct: 242 PGAPGGPGYPGPPGQKGPSGAPGQPGSDGNPGAPGQP 278
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 1340 AXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
A P P + G PG PG+ R G P P G A P G
Sbjct: 177 AGAPGAPGQDGQPGAPGQDGHRST-GTPGAAGAP-GPAGPAG 216
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular collagen
RAM-4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXP-PPGNXPXGXAXP 1221
P P G PG PG G PG P PG P P
Sbjct: 102 PGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEP 139
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPG-XPPPG 1248
P + G PG PG+ G PG PPPG
Sbjct: 254 PGRKGPPGLPGQCGPPGPPGYTPPPG 279
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2
Query: 1316 KXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
+ G PG PG+ RG G P P P G A P G
Sbjct: 186 EAGAPGGPGKNGQRGS-GAPGPAG-PEGPAGPAG 217
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.5 bits (63), Expect = 6.6
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 1331 PRXPK-KXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P+ P + G PG PG G PG P P P P
Sbjct: 199 PKGPNGEPGAPGTPGGNALPGPPGPPGPQGPPGADGLP 236
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical protein
AC3.6 protein.
Length = 325
Score = 29.1 bits (62), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXP 1257
P + G PG PGE G PG P
Sbjct: 110 PGRPGHPGHPGEDGSAGQPGSP 131
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical protein
M18.1 protein.
Length = 337
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPX--GXAXPXG 1215
P + G G PG G PG P P P G A P G
Sbjct: 223 PGQNGNDGQPGNDGAPGQPGQPGPDGHPGQPGNAGPPG 260
Score = 29.1 bits (62), Expect = 8.7
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXGXXXF 1203
G PG PG G PG P P P G +
Sbjct: 239 GQPGQPGPDGHPGQPGNAGPPGTPGAAGQPGGDAAY 274
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 8.7
Identities = 26/93 (27%), Positives = 28/93 (30%), Gaps = 7/93 (7%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREF-----XXXXGPPPGXVXLPXNXXXXXPP 1174
G P P PG PG P PP F PPP + P PP
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Query: 1173 X--XXXPXXXXXSPPGGEPXXXXPPTGXXEXPP 1081
P PP P PP+G PP
Sbjct: 354 RYPSAGPGMYPPPPPSRPP---APPSGHGMIPP 383
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 29.1 bits (62), Expect = 8.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXP 1239
P P G PG PG+ G PG P P
Sbjct: 1034 PGAPGLNGEPGSPGQYGMPGLPGGPGESGLP 1064
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 29.1 bits (62), Expect = 8.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXP 1239
P P G PG PG+ G PG P P
Sbjct: 1291 PGAPGLNGEPGSPGQYGMPGLPGGPGESGLP 1321
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 1082 GGXSXXPVGGXXXXGSPPGGEXXXXXGXXXXGGXXXXKXIGXXTXPGGG 1228
GG + P GG S GG G GG G GGG
Sbjct: 221 GGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGG 269
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 1082 GGXSXXPVGGXXXXGSPPGGEXXXXXGXXXXGGXXXXKXIGXXTXPGGG 1228
GG + P GG S GG G GG G GGG
Sbjct: 221 GGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGG 269
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 8.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXP 1239
P P G PG PG+ G PG P P
Sbjct: 1290 PGAPGLNGEPGSPGQYGMPGLPGGPGESGLP 1320
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein 14
protein.
Length = 345
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P P G G PG+ RG PG P P G P G
Sbjct: 221 PGAPGNAGEDGKPGDQGPRGPPGIPGAPGQP-GRPGPPG 258
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 29.1 bits (62), Expect = 8.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ P P P G A P G
Sbjct: 207 PGNAGAPGAPGKVNEVPGPAGAPGAPGPDGPAGPAG 242
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 29.1 bits (62), Expect = 8.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ P P P G A P G
Sbjct: 269 PGNAGAPGAPGKVNEVPGPAGAPGAPGPDGPAGPAG 304
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein 170
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ P P P G A P G
Sbjct: 206 PGNAGAPGAPGKVNEVPGPAGAPGAPGPDGPAGPAG 241
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein 169
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ P P P G A P G
Sbjct: 206 PGNAGAPGAPGKVNEVPGPAGAPGAPGPDGPAGPAG 241
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein 168
protein.
Length = 301
Score = 29.1 bits (62), Expect = 8.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ P P P G A P G
Sbjct: 207 PGNAGAPGAPGKVNEVPGPAGAPGAPGPDGPAGPAG 242
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein 167
protein.
Length = 301
Score = 29.1 bits (62), Expect = 8.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 1322 PKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P G PG PG+ P P P G A P G
Sbjct: 207 PGNAGAPGAPGKVNEVPGPAGAPGAPGPDGPAGPAG 242
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 8.7
Identities = 26/93 (27%), Positives = 28/93 (30%), Gaps = 7/93 (7%)
Frame = -1
Query: 1338 GXTPXPQKXGVXGXPGXXXXPGXPRXXPPREF-----XXXXGPPPGXVXLPXNXXXXXPP 1174
G P P PG PG P PP F PPP + P PP
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Query: 1173 X--XXXPXXXXXSPPGGEPXXXXPPTGXXEXPP 1081
P PP P PP+G PP
Sbjct: 364 RYPSAGPGMYPPPPPSRPP---APPSGHGMIPP 393
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
P P G G PG+ RG PG P P G P G
Sbjct: 202 PGAPGNAGEDGKPGDQGPRGPPGIPGAPGQP-GRPGPPG 239
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 8.7
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -2
Query: 1340 AXXPRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXPXG 1215
A P P G PG PG+ G PPG P G P G
Sbjct: 229 AGSPGQPGAPGQPGRPGKNAQGGSSRPGPPG--PAGPPGPPG 268
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 29.1 bits (62), Expect = 8.7
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -2
Query: 1331 PRXPKKXGXPGXPGEXXXRGXPGXPPPGNXPXGXAXP 1221
P P G PG PG+ G PG P P P
Sbjct: 141 PGFPGPAGPPGAPGDKGNDGAPGLRGPDGHPGHPGNP 177
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen protein
47 protein.
Length = 301
Score = 29.1 bits (62), Expect = 8.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 1310 GXPGXPGEXXXRGXPGXPPPGNXP 1239
G PG PG+ G PG P P P
Sbjct: 132 GPPGSPGDHGSPGEPGYPGPSGPP 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,349,950
Number of Sequences: 27780
Number of extensions: 537781
Number of successful extensions: 5162
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4004
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4379894956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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