Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_H07_e632_15.seq
         (1569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            33   0.017
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            30   0.16 

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 33.5 bits (73), Expect = 0.017
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 7/51 (13%)
 Frame = +1

Query: 208  SEIEKQFVEIKKQVQENFK-PDN------VKKQFNNMVDDFNXFMSSMNPN 339
            S+I+KQF ++K+ VQE  +  DN      +   F ++ +DFN F+S++NP+
Sbjct: 3199 SQIDKQFHDLKQTVQEYRQLADNRNSGNWLDNIFKDIKEDFNVFLSTVNPS 3249


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 30.3 bits (65), Expect = 0.16
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 7/49 (14%)
 Frame = +1

Query: 208  SEIEKQFVEIKKQVQENFK-PDN------VKKQFNNMVDDFNXFMSSMN 333
            S+I+KQF ++K+ VQE  +  DN      +   F ++ +DFN F+S++N
Sbjct: 3196 SQIDKQFHDLKQTVQEYRQLADNRNSGNWLDNIFKDIEEDFNVFLSTVN 3244


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,588
Number of Sequences: 2352
Number of extensions: 9431
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 184909725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)