Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_H06_e624_16.seq
(1512 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 281 3e-74
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 278 2e-73
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 276 1e-72
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 218 4e-55
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 213 1e-53
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 193 9e-48
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 190 1e-46
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 175 3e-42
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 162 2e-38
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 152 2e-35
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 149 2e-34
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 140 7e-32
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 136 1e-30
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 132 2e-29
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 132 2e-29
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 129 2e-28
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 74 7e-26
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 118 5e-25
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 103 2e-20
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 97 1e-18
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 92 4e-17
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 91 7e-17
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 91 7e-17
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 90 2e-16
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 86 2e-15
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 84 8e-15
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 83 2e-14
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 83 2e-14
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 81 7e-14
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 77 2e-12
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 76 2e-12
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 72 5e-11
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 71 6e-11
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 69 2e-10
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 69 2e-10
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 69 4e-10
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 66 3e-09
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 65 4e-09
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 60 1e-07
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 60 2e-07
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 59 3e-07
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 58 5e-07
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 58 8e-07
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 58 8e-07
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 58 8e-07
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 58 8e-07
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 57 1e-06
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 52 5e-05
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 46 0.003
UniRef50_P33201 Cluster: mRNA turnover protein 4; n=12; Saccharo... 46 0.003
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 43 0.018
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 43 0.018
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 43 0.024
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 40 0.23
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 38 0.52
UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1; ... 37 1.6
UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Re... 35 4.9
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 281 bits (690), Expect = 3e-74
Identities = 136/226 (60%), Positives = 174/226 (76%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
++QMQQIRISLRG + +LMGKNT +RKA++ HLE NP LEK+LPH+KGN+GFVFT D+V
Sbjct: 37 SKQMQQIRISLRGKATILMGKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMV 96
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIIN 416
D+R+ +L N V APA+ GAIAP+ V +PA NTGLGPEKTSFFQALSI TKIS+G IEI++
Sbjct: 97 DIREIMLSNQVGAPAKAGAIAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTIEILS 156
Query: 417 DVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRXF 596
+VH++K G+KVGASEATLL ML PF+YGL + QVYDSG++ AP+IL + F
Sbjct: 157 EVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYDSGSVFAPSIL-DITEDDLIKQF 215
Query: 597 LAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTEXXXQE 734
++G+AN AA+SL I PTVA PH I G +NL A+A T+ +E
Sbjct: 216 MSGLANVAAVSLQIGYPTVASVPHSIVNGFKNLLAVAVATDITFKE 261
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 278 bits (682), Expect = 2e-73
Identities = 138/221 (62%), Positives = 168/221 (76%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
++QMQQIR+SLRG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 37 SKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLT 96
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIIN 416
++RD LL N V A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+G IEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 417 DVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRXF 596
DV ++K GDKVGASEATLLNMLN PFS+GLV++QV+D+G+I P +L F
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVL-DITEETLHSRF 215
Query: 597 LAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTE 719
L GV N A++ L I PTVA PH I G + + A++ T+
Sbjct: 216 LEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETD 256
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 276 bits (677), Expect = 1e-72
Identities = 137/224 (61%), Positives = 169/224 (75%), Gaps = 3/224 (1%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
++QMQ IR+SLRG ++VLMGKNTMMRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL
Sbjct: 37 SKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLT 96
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIIN 416
+VRD LL N V A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+G IEI++
Sbjct: 97 EVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 417 DVHILKPGDKVGASEATL---LNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFX 587
DV ++KPGDKVGASEATL LNMLN PFSYGL+++QVYD+G++ +P +L
Sbjct: 157 DVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVL-DITEDALH 215
Query: 588 RXFLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTE 719
+ FL GV N A++ L I PT+A PH I G + + A+ T+
Sbjct: 216 KRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETD 259
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 218 bits (532), Expect = 4e-55
Identities = 111/221 (50%), Positives = 148/221 (66%), Gaps = 2/221 (0%)
Frame = +3
Query: 63 QMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLV 236
Q+Q IR LRG S+VLMGKNTMM+++++ H + N A LLP ++GNVG +FT+GDL
Sbjct: 40 QLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLK 99
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIIN 416
+V +++ + V APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KG +EII
Sbjct: 100 EVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Query: 417 DVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRXF 596
V ++K GDKVG+SEA LL L PFSYGLVV+ VYD+G++ P +L + F
Sbjct: 160 PVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVL-NLTEDDLVEKF 218
Query: 597 LAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTE 719
AGV+ ALSL I PTVA PH +N+ A+A TE
Sbjct: 219 AAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATE 259
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 213 bits (520), Expect = 1e-53
Identities = 106/221 (47%), Positives = 148/221 (66%), Gaps = 2/221 (0%)
Frame = +3
Query: 63 QMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLV 236
Q+Q IR LRG S+VLMGKNTMM+++++ H E N A+ LLP ++GNVG +FT+GDL
Sbjct: 39 QLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLK 98
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIIN 416
+V +++ + V APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KG +EII
Sbjct: 99 EVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 158
Query: 417 DVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRXF 596
V ++K GDKVG+SEA LL L PFSYGLVV+ VYD+G++ +P +L F
Sbjct: 159 PVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVL-DLTEDQLVEKF 217
Query: 597 LAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTE 719
+G++ +L+L + PT+A PH +N AIA T+
Sbjct: 218 ASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATD 258
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 193 bits (471), Expect = 9e-48
Identities = 98/204 (48%), Positives = 129/204 (63%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
+ Q Q IR LRG +MGKNT++RKAIK+ ET P LE+LLPHIKGNVGF+FT+GDL
Sbjct: 44 SSQFQTIRKELRGTCEFVMGKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLY 103
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIIN 416
++ KL E +PA+ G IAP V++PA +TGL P +T+F QAL+I +KI+KG IEI +
Sbjct: 104 QLKAKLTELKAPSPAKAGVIAPNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITS 163
Query: 417 DVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRXF 596
+ ++K G+KVG S+A LL L PF YG V+ VYD+G + L + F
Sbjct: 164 ETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIVYDAKAL-DLTESDIVKKF 222
Query: 597 LAGVANXAALSLXIRXPTVAXXPH 668
GV A+SL PT A PH
Sbjct: 223 QEGVQAATAISLAANLPTEAACPH 246
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 190 bits (462), Expect = 1e-46
Identities = 99/220 (45%), Positives = 137/220 (62%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
+ Q+Q+IR S+RG VLMGK TM+RK I+D ++ P L+ L ++K N +F + ++
Sbjct: 36 SSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIA 95
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIIN 416
+V+ + V APA+ G AP V+IPA TG+ P +TSF Q L I TKI++G I+I+N
Sbjct: 96 EVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVN 155
Query: 417 DVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRXF 596
+VHI+K G KVGASEATLL LN PF+YGL K +YD+G +P+I F
Sbjct: 156 EVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSISEE----DLINKF 211
Query: 597 LAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVT 716
G+ N AA+SL I PTVA PH + +NL AI+ T
Sbjct: 212 KQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFET 251
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 175 bits (425), Expect = 3e-42
Identities = 98/217 (45%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
+ QM +R SLRG + +LMGKNT +R A+K +L+ P +EKLLP +K N+GFVF + DL
Sbjct: 37 SNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLS 96
Query: 237 DVRDKLLENXVQA-PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEII 413
++R+ +L+N + PAR G IAP+ V IP TG+ P TSF ++L I TKI KG IEI
Sbjct: 97 EIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQ 156
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRX 593
VH++K G+KV AS ATLL N P SYG+ V+ VYD G I +L
Sbjct: 157 EHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVL-DITDEDILEK 214
Query: 594 FLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAI 704
F GV+N AALS T A PH +N+ A+
Sbjct: 215 FSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVAL 251
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 162 bits (393), Expect = 2e-38
Identities = 95/238 (39%), Positives = 136/238 (57%), Gaps = 17/238 (7%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL-ETN----------------PALEKLL 185
++Q+Q +R LR + +L GKNT++R +K L E N P LE L+
Sbjct: 30 SKQLQDLRRVLRNKATILFGKNTLIRAGLKHRLTEPNAEDEDFEKRKNTWTPKPELEHLI 89
Query: 186 PHIKGNVGFVFTRGDLVDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQ 365
P ++GNV +F ++ +V + E+ V A A+ G IAP V + TG+ P +TSFFQ
Sbjct: 90 PLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPNDVHVYPGPTGMDPSQTSFFQ 149
Query: 366 ALSIPTKISKGXIEIINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIX 545
AL I TKI KG I+I+N++H++ KVG SEA LL L PFS+GL VK VYD+G++
Sbjct: 150 ALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSFGLKVKNVYDNGSVY 209
Query: 546 APAILRHXAGGPFXRXFLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTE 719
+ +L+ F+ GV N AA+SL + PT A PH I G +NL +IA V +
Sbjct: 210 SAEVLK-LTNDILLGKFMNGVRNIAAMSLTLGIPTAASAPHSIVSGFKNLVSIAHVVD 266
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 152 bits (369), Expect = 2e-35
Identities = 91/235 (38%), Positives = 130/235 (55%), Gaps = 9/235 (3%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPA--LEKLLPH-------IKGNVG 209
+QQ+ +R LRG ++MGK T+ +K ++ E A +KLL + + GN
Sbjct: 35 SQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLYNTCIEKKLLCGNTA 94
Query: 210 FVFTRGDLVDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKI 389
+FT ++ + L ++ VQAPAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI
Sbjct: 95 LIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKI 154
Query: 390 SKGXIEIINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHX 569
+KG +EI++D +L GD+V S ATLL L+ PF Y + V+ V+D G + L
Sbjct: 155 AKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDL-SI 213
Query: 570 AGGPFXRXFLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTEXXXQE 734
+ L G++N AALSL PT A PH I + L + TE E
Sbjct: 214 TDDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDE 268
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 149 bits (360), Expect = 2e-34
Identities = 90/239 (37%), Positives = 137/239 (57%), Gaps = 18/239 (7%)
Frame = +3
Query: 57 AQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDHL------ETN-----------PALEKL 182
A+Q+ R LR + S++LMG+NT+++ A++ + E++ P +E L
Sbjct: 37 ARQIHACRKELRSNNSLMLMGENTLIKAALQKRISKPIESESDFEERSKTWTPIPHMEPL 96
Query: 183 LPHIKGNVGFVFTRGDLVDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFF 362
+ +KGN+G +FT DL D++D + + +APAR G++A V I A TGL P++T+FF
Sbjct: 97 VRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDPKQTAFF 156
Query: 363 QALSIPTKISKGXIEIINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTI 542
Q L+IPTKI+K IEI D I+ G+KVG++EA LL LN PFSY L V V+D+G +
Sbjct: 157 QNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSYKLSVAHVFDNGNV 216
Query: 543 XAPAILRHXAGGPFXRXFLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTE 719
P +L + ++N A++SL PT A PH I +NL A+ +E
Sbjct: 217 YGPGVL-DITSESIIESYKRVISNVASVSLESGIPTRASAPHSIMRVFKNLLAVTYESE 274
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 140 bits (340), Expect = 7e-32
Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 1/222 (0%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSI-VLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDL 233
A Q+ IR L H VL GKN++MR+A+ E P + +L H+ G +FT G+
Sbjct: 38 ANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQLKEELPGIRQLEEHLYHGAGLIFTNGNF 97
Query: 234 VDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEII 413
++D + N + + A+ GAIAP V++ T + P AL+I KI KG IEI
Sbjct: 98 KAIKDVIDANCLGSAAKVGAIAPCDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEIT 157
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRX 593
+ ++ G KVGASEA +LN+L PF Y L ++ +YD G + P+IL
Sbjct: 158 GEKQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMYDPSILA-ITEEVLGEK 216
Query: 594 FLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTE 719
F G+ N L+L + P A PH + +++ AIA E
Sbjct: 217 FRTGLRNVTGLALAVGYPCAASAPHLVGSAFKDIAAIAIAIE 258
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 136 bits (330), Expect = 1e-30
Identities = 86/240 (35%), Positives = 123/240 (51%), Gaps = 16/240 (6%)
Frame = +3
Query: 63 QMQQIRISLRGHSIVLMGKNTMMRKAIK---DHLETN-------------PALEKLLPHI 194
Q+QQIR SL ++I+++GKNT++RKA++ L T+ P L L+PH+
Sbjct: 41 QLQQIRRSLGSNNIMVIGKNTVVRKAVQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHL 100
Query: 195 KGNVGFVFTRGDLVDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALS 374
K + +VF + ++ K+ V APAR G +A V+IP TG+ P + +FF ALS
Sbjct: 101 KNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDPSQINFFHALS 160
Query: 375 IPTKISKGXIEIINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPA 554
I TKI KG IEI +V + G K+G SE +LL +N PFSYG+ YD+G I
Sbjct: 161 ISTKIQKGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEE 220
Query: 555 ILRHXAGGPFXRXFLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTEXXXQE 734
+L + F AA+SL T PH I ++L AI T +E
Sbjct: 221 VL-SISPSVILDAFAQNTLRIAAVSLATGYVTAPSVPHFIQNAFKDLAAIGMETGYKFKE 279
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 132 bits (319), Expect = 2e-29
Identities = 79/202 (39%), Positives = 112/202 (55%)
Frame = +3
Query: 63 QMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDV 242
Q+ QIR LRG + +L GKNT++++ I + L+ + L+ LLP+IK NV FVFT GD +
Sbjct: 42 QIAQIRRLLRGKAELLAGKNTIIKRVI-NQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAI 99
Query: 243 RDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIINDV 422
+ +A A+ G +AP VVI T GP++ F+ AL I TKI+KG IEI+N V
Sbjct: 100 LKAFKKTKRKAAAKAGIVAPADVVIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPV 159
Query: 423 HILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRXFLA 602
+++K GD V S ATLL L PF Y + +YD G I A+L + A
Sbjct: 160 NLIKKGDIVTPSHATLLQRLEIDPFFYAMSALNLYDDGEIYDAAVL-EIDDSVMEAKWNA 218
Query: 603 GVANXAALSLXIRXPTVAXXPH 668
G+ +L+L P + PH
Sbjct: 219 GLEAFVSLALGANFPCLPAIPH 240
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 132 bits (319), Expect = 2e-29
Identities = 77/204 (37%), Positives = 118/204 (57%)
Frame = +3
Query: 63 QMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDV 242
Q++ I+ G++ +LMGKN+ +R+AI D P L + +KG+V FVF +G+ D+
Sbjct: 63 QLKDIKRQWGGNAELLMGKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDI 120
Query: 243 RDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIINDV 422
+ + EN +A A+ G +A V + + TG+ P+KTS+FQAL I TKI+KG +EII+
Sbjct: 121 KKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPY 180
Query: 423 HILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRXFLA 602
+L GDKVG S+A LL MLN PF Y + + Q+Y+ G I +++ F A
Sbjct: 181 KVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIYDSSLIDIGEEDIFTSLRNA 240
Query: 603 GVANXAALSLXIRXPTVAXXPHXI 674
++ AA SL T A P+ +
Sbjct: 241 -ISTVAAASLGAGVITQASMPYNV 263
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 129 bits (312), Expect = 2e-28
Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 18/234 (7%)
Frame = +3
Query: 57 AQQMQQIR-ISLRGHSIVLMGKNTMMRKAIKDHLETNPA-----------------LEKL 182
++Q+Q IR I + ++++++GKNT+ +K + ++ P L+ L
Sbjct: 37 SKQVQDIRRILAKRNALLVIGKNTLFKKVLATRVQELPKEHEYYEDLAKFGSAIKELDAL 96
Query: 183 LPHIKGNVGFVFTRGDLVDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFF 362
+ G VGF+FT + D++ + EN V+ PAR GA+AP+ VVIP TG+ P FF
Sbjct: 97 KNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFF 156
Query: 363 QALSIPTKISKGXIEIINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTI 542
AL IPTKI KG I+I D +LK G KVG S+A LL L PF YG+ V YD+G+I
Sbjct: 157 HALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSI 216
Query: 543 XAPAILRHXAGGPFXRXFLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAI 704
+ F V N +A+SL A P+ + ++L AI
Sbjct: 217 LNKQQVSVNL-NDIVAKFQQNVRNVSAISLQNGWVNEASAPYLLANAFKDLAAI 269
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 74.1 bits (174), Expect(2) = 7e-26
Identities = 56/118 (47%), Positives = 63/118 (53%)
Frame = +3
Query: 366 ALSIPTKISKGXIEIINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIX 545
ALSIP KISKG IEIINDV ILK GDK+ +QVY G+I
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKI----------------------EQVY--GSIF 773
Query: 546 APAILRHXAGGPFXRXFLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTE 719
+P IL F GVAN A +SL I PT+A PH I IG RNL IA+VTE
Sbjct: 774 SPDIL-DIKPEDLRAKFQVGVANLAGVSLEIGYPTLASVPHNIAIGFRNLLVIAAVTE 830
Score = 67.7 bits (158), Expect(2) = 7e-26
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +3
Query: 132 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENXV 269
++AI+ HLE N L KLLPHIK VGFVFT+GDLV+VRDKL+E+ V
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 118 bits (283), Expect = 5e-25
Identities = 58/168 (34%), Positives = 98/168 (58%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
++Q+++ + L SI++ GKNT+++K ++D L+ + ++L I GNV F+FT D
Sbjct: 36 SEQIKKCKRLLNNTSILITGKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNEDPF 95
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIIN 416
+++ L N + A+ G +A V + T + P+ FQ+L+IPTKI KG IEII
Sbjct: 96 FIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTNISPDGIGIFQSLNIPTKILKGQIEIIT 155
Query: 417 DVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAIL 560
+ +L+ G K+ +EATLL LN PF + + Y++G P++L
Sbjct: 156 NFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENGKSYDPSVL 203
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 103 bits (246), Expect = 2e-20
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Frame = +3
Query: 57 AQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDL 233
A Q+Q+IR LR +I+ M +NT+MR A+++ L+ P LE LL +I+G V F+FT D
Sbjct: 48 APQLQEIRAKLRERDTIIRMSRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDP 107
Query: 234 VDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGXIEI 410
+ L E+ APA+PG IAP +V+P T P S Q +P +I G + I
Sbjct: 108 FKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVI 167
Query: 411 INDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTI 542
D ++K G+++ A +L L P G+ + + GT+
Sbjct: 168 TKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVAIVAEGTL 211
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 96.7 bits (230), Expect = 1e-18
Identities = 60/172 (34%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVL-MGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRG 227
A + Q+R +R + +L + +NT++ AIK + P LEKL+ +I G + T
Sbjct: 35 AYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYIDRGAGILVTNM 94
Query: 228 DLVDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGXI 404
+ + L +N APA+PGA+ P VV+PA T L P QAL IP +I KG +
Sbjct: 95 NPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKV 154
Query: 405 EIINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAIL 560
I D +LK G+ + A +LN L P GL V VY+ G + P +L
Sbjct: 155 TIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVL 206
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 91.9 bits (218), Expect = 4e-17
Identities = 46/159 (28%), Positives = 85/159 (53%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
++Q+ IR LRG S +++GK + + ++++ + ++ N+G +FT +L
Sbjct: 32 SKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRWMSVKEYLSDNIGLIFTNSNLK 91
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGXIEIIN 416
+ + + + + G IA +++I L P +T FFQAL IPT+ISK IEII
Sbjct: 92 ILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQALGIPTRISKSSIEIIE 151
Query: 417 DVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDS 533
D+ ++ + S+ LL L+ P YG+ +K+++ S
Sbjct: 152 DILLVSKNQALNKSQEVLLKKLDIKPHKYGVKIKKIFSS 190
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 91.1 bits (216), Expect = 7e-17
Identities = 52/148 (35%), Positives = 77/148 (52%)
Frame = -2
Query: 530 VVHLFDNKTIRKGXXVQHVEKSSFRSSHLITRLQDMDIIDNFNXTL*NLSGDGKSLEERS 351
VV+L D +T+ + VQ V++ SFRS+ +T + D+++ DNFN T NL + +SLEERS
Sbjct: 133 VVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEERS 192
Query: 350 LLRTKASVMSGNDDRQWSNGSRTSRGLDXVLQQFITHINKISTGEDKANISLDVRKQFFE 171
L V N D W N + + + V I + GED+ N++LD R+Q F
Sbjct: 193 LTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVGEDETNVTLDERQQLFV 252
Query: 170 SWICFKMVLDGFPHHGVFAHEHNAVTTQ 87
W D HGV H+ N+ +Q
Sbjct: 253 VWEVRDETSDSSSDHGVLTHQDNSSASQ 280
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 91.1 bits (216), Expect = 7e-17
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL--ETNPALEKLLPHIKGNVGFVFTRGD 230
A + Q R LRGH +V + +N + A++ N +EK ++ G GF+FT +
Sbjct: 49 ASMLHQYRRVLRGHGVVKVFRNKLFLIALRRIYGDSVNAEIEK---YLSGENGFIFTNEN 105
Query: 231 LVDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGXIE 407
D+ +++N V+ A+PG + +++PA NTG+ P S F L IPT+I G I
Sbjct: 106 PFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGINPGPVLSRFSKLKIPTQIRDGKIW 165
Query: 408 IINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQV 524
+ D + KPGD V A LL ++N P L VK V
Sbjct: 166 VARDTQVAKPGDTVTPELADLLRLINVKPVYESLKVKAV 204
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 89.8 bits (213), Expect = 2e-16
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGD 230
A Q+Q+IR +R + M +NT++++A+++ E NP KL+ ++ V T +
Sbjct: 41 AVQLQEIRDKIRDQMTLKMSRNTLIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTEMN 100
Query: 231 LVDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGXIE 407
+ L E+ AP + GAIAP + + + +TG+ P S +A+ IP I KG I
Sbjct: 101 PFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIG 160
Query: 408 IINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILR 563
I D + K GD + A +L+ L P + GL V VY+ G I +LR
Sbjct: 161 IKEDKVVAKEGDVISPKLAVVLSALGIKPVTVGLNVLGVYEEGVIYTSDVLR 212
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 86.2 bits (204), Expect = 2e-15
Identities = 49/104 (47%), Positives = 57/104 (54%)
Frame = -3
Query: 397 PFEILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTXFSNSLSRTSTRSPRV 218
P ILVG +AWKKEV G PVL A +GA AP AGA T S V
Sbjct: 3 PLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGSLV 62
Query: 217 KTKPTFPLM*GSSFSRAGFVSRWSLMAFLIMVFLPMSTML*PRN 86
KTKPT PL G++FS++G + LMA L MVFLP+ T P N
Sbjct: 63 KTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLN 106
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 84.2 bits (199), Expect = 8e-15
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
++Q+Q +R L G + + M +NT++ +A++ E L+ L +++G VG V T +
Sbjct: 43 SKQLQDMRRGLHGQAALRMSRNTLLVRALE---EAGDGLDTLTEYVEGEVGLVATNDNPF 99
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGXIEII 413
+ +L + AP G +AP +V+P +TG+ P Q + +I +G I+++
Sbjct: 100 GLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVL 159
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRX 593
+D + + G+ V + +L+ L P GL ++ V+ G + P L +
Sbjct: 160 DDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELEIDV-DEYRAD 218
Query: 594 FLAGVANXAALSLXIRXPTVAXXPHXIPIG 683
+ A+ LS+ PT P I G
Sbjct: 219 IQSAAASARNLSVNAAYPTERTAPDLIAKG 248
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 83.0 bits (196), Expect = 2e-14
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Frame = +3
Query: 99 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENXVQAP 278
S++ + KNT+ A+K+ T +E + H++G +FT + ++ L + +
Sbjct: 59 SLMKVVKNTIFLLALKN---TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMRE 115
Query: 279 ARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGXIEIINDVHILKPGDKVGA 455
AR G IA +V+PA NTG+ P S F L IPT++ +G I I D + KPGD +
Sbjct: 116 ARAGDIATSEIVLPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISP 175
Query: 456 SEATLLNMLNXXPFSYGLVVKQVYDSGTIXAP 551
A LL+ L P L +K +Y G + +P
Sbjct: 176 ELAELLSKLGLKPIESKLQIKTIYLDGKVVSP 207
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 83.0 bits (196), Expect = 2e-14
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 3/221 (1%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
A ++ +IR LRG + + + KNT+ + A K+ +EKL ++ G F+FT+ D
Sbjct: 44 ADKLHEIRKKLRGKATIKVTKNTLFKIAAKN---AGIDIEKLEQYLTGPNVFIFTK-DNP 99
Query: 237 DVRDKLLENX-VQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGXIE 407
+ + EN ++ A PG A VVIPA +TG+ GP S F L + TK+ G +
Sbjct: 100 FITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAGPI-LSVFGKLKVQTKVQDGKVH 158
Query: 408 IINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFX 587
++ D + KPGD + A +L L P L +K Y G + L+ G +
Sbjct: 159 VVKDTVVAKPGDVIPAEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAESLKLDLEG-YR 217
Query: 588 RXFLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIAS 710
N L++ I PT I +N A+AS
Sbjct: 218 SNITEAYRNAFTLAVEIAYPTPDVLKFTISKVFKNAIALAS 258
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 81.0 bits (191), Expect = 7e-14
Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
A+Q+Q +R SL ++I+ M + ++ A+++ +E L +++G VFT+ +
Sbjct: 35 AKQLQTMRKSLGDNAILKMSRKNFIKIALEN--SDKEEVEGLADYLEGQPAMVFTKMNPF 92
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGXIEII 413
+ L ++ +APA+ G+IAP +V+PA +T P Q + IP KI KG I +
Sbjct: 93 KLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVT 152
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAIL 560
+D I+ G+++ + A +L L P G+ + V + TI +L
Sbjct: 153 DDAKIVDEGEEIPKAVADILTKLEIHPMEVGIDLLAVCEGDTIYTADVL 201
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 76.6 bits (180), Expect = 2e-12
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 2/164 (1%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
A Q+ +R LR K+ + RKA+ P ++K++ + G F+FT
Sbjct: 25 ASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMFMFTDISPF 82
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGXIEI 410
+ L +N AR G IA + V +PA NTG+ GP T F +A IPTKI +G I I
Sbjct: 83 TLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWI 141
Query: 411 INDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTI 542
+ D +K G+ +G A LL L+ P + ++ + G I
Sbjct: 142 LKDTTPVKKGEPIGDKLAPLLGKLDIKPVEAVIALESALEEGVI 185
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 76.2 bits (179), Expect = 2e-12
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
A Q+QQIR +LRG + V M +NT++ A+ E ++ L H +G +FT +
Sbjct: 39 ASQVQQIRRNLRGTARVKMARNTLIEHALN---ELGGSVATLNDHAEGQSALIFTNENPF 95
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGXIEII 413
+ L + + A+PG AP +VIP T P Q + IP I G ++I
Sbjct: 96 KLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQQVGIPAAIEGGKVKIR 155
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAIL 560
++K G+ + A L L P GL+++ Y TI P +L
Sbjct: 156 ETKTVVKKGEVINKKVAEALVKLGVKPMDVGLILQAAYYRETIFTPDLL 204
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 71.7 bits (168), Expect = 5e-11
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Frame = +3
Query: 117 KNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENXVQAPARPGAI 296
KN ++RKA + P +++ + G+ F+FT + + K+ + + APA+PG +
Sbjct: 68 KNNLVRKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDV 125
Query: 297 APLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGXIEIINDVHILKPGDKVGASEATLL 473
A +V+PA +TGL P S F L I T + G I I D + KPGD + A+LL
Sbjct: 126 AQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLL 185
Query: 474 NMLNXXPFSYGLVVKQVY 527
L P + +K Y
Sbjct: 186 QKLGITPMELKMKIKGAY 203
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 71.3 bits (167), Expect = 6e-11
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 1/201 (0%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
A ++Q+IR L+ +++ + +NT+ +A+ E+ P + + L + +FT
Sbjct: 42 ATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGESIPEMTRYLDN---QTALIFTNESPF 98
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGXIEII 413
+ L + +P + GAIAP +++ T P Q+ IP I G + +
Sbjct: 99 KLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVK 158
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILRHXAGGPFXRX 593
+ K G+ V AT+L+ L P GL ++ YD GTI P +L +
Sbjct: 159 ETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLA-VDESKYFSD 217
Query: 594 FLAGVANXAALSLXIRXPTVA 656
+ N LS+ PT A
Sbjct: 218 IIRAAQNAFNLSVNTAYPTGA 238
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 69.3 bits (162), Expect = 2e-10
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
Frame = +3
Query: 63 QMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDV 242
Q+Q++R L + + KN ++ +A+++ E+LL G +FT + ++
Sbjct: 45 QLQKLRKKLSKKVLFRVSKNKLILRALRNAGIDTSKFEELLT---GQNLLLFTHMNAFEL 101
Query: 243 RDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGXIEIIND 419
L + + +PG IA +VIP NTGL P S F L IPT+I I I D
Sbjct: 102 SLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRIQGNSIVITRD 161
Query: 420 VHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTI 542
+ KPGD + A+LL L+ + +K YD G I
Sbjct: 162 TVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYDHGII 202
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 69.3 bits (162), Expect = 2e-10
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Frame = +3
Query: 66 MQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVR 245
+ + R LR + ++ + K T+ + A PA ++ ++G VGF FT + +V
Sbjct: 50 LHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EIAEKVRGEVGFFFTSFNPAEVI 107
Query: 246 DKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGXIEIINDV 422
+ EN V+ A+PG AP +V+PA T P S F L IPT++ +G I I D
Sbjct: 108 KIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGKLKIPTRVQEGKIWIAKDT 167
Query: 423 HILKPGDKVGASEATLLNMLNXXP 494
+ K G ++ A +L ++ P
Sbjct: 168 VVAKAGQEITPEMAEVLRVVGIEP 191
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 68.5 bits (160), Expect = 4e-10
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Frame = +3
Query: 63 QMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDV 242
Q+ +R +L+ K+ + +KA+++ P ++ ++ KG V +FT +
Sbjct: 41 QILPLRKTLKDDVEFFSVKDKVAQKALEN--SDIPGMKDMIGEFKGQVMIMFTNMSPFKL 98
Query: 243 RDKLLENXVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGXIEIIN 416
L +N + AR G IA + VV+PA NTG+ GP T F +A IPTKI +G I I
Sbjct: 99 NVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWIAK 157
Query: 417 DVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSG 536
D + G+ + A +L L+ P G+ + + G
Sbjct: 158 DSTPVLKGEAINEKLAAILGKLDIKPVEAGITLFTALEDG 197
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 65.7 bits (153), Expect = 3e-09
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
++Q+Q+IR RG +++ + KN+M+ ++ + ++ I + +FT D
Sbjct: 39 SKQLQRIRKEFRGDALLKVSKNSMIARSFG-----GSGMNDMVDFIDDQMALIFTDLDAF 93
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGXIEII 413
+ L + + AP + GA+AP+ +VI T L P Q L IP+ I G + +
Sbjct: 94 ALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGPVVGELQNLGIPSGIDGGKVVVK 153
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSG 536
++ G+ V A +L L P + GL + VYDSG
Sbjct: 154 QRKVAVEEGEIVSPELADMLAKLEIYPITEGLDLCAVYDSG 194
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 65.3 bits (152), Expect = 4e-09
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 4/230 (1%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
A QMQ+IR RG + + + KNT++ +A+ D L + KL ++ + + +
Sbjct: 39 AGQMQKIRREFRGKAEIKVVKNTLLERAL-DALGGD--YLKLKDYLGDQIAIITADENPF 95
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGXIEII 413
+ + + V +P +P ++P+ VV+ T + P + Q +P I KG + +
Sbjct: 96 RLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPLMAELQMAGLPVAIEKGKVVVK 155
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAP---AILRHXAGGPF 584
++K G+ V A L L+ P GL VK + DSG I P AI F
Sbjct: 156 ATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVILTPETLAIDTEKVLEDF 215
Query: 585 XRXFLAGVANXAALSLXIRXPTVAXXPHXIPIGSRNLXAIASVTEXXXQE 734
R + + N A S + T + +RNL A + E E
Sbjct: 216 QRAYQMAL-NLAVNSAYVTEETAEILIMKAVMDARNLAINAGIFEKGVME 264
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 60.1 bits (139), Expect = 1e-07
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
A + Q++R LR S V + N + R+AI L+++ ++ L+ +I+ +F+ +
Sbjct: 42 ADEFQRLRGLLRPISEVRVVNNNIARRAI---LKSDESIRPLVDYIEDQTALIFSDANPF 98
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGXIEII 413
++ L P + GA+AP+ +V+ + T P Q+ IP I G + I
Sbjct: 99 ALKKMLDAEKRPMPIKAGAVAPVDIVVESGETSFSPGPMVGKLQSAGIPAAIKGGKVVIN 158
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVY 527
V + K GD + A +L ++ P GL ++ Y
Sbjct: 159 QRVVLAKQGDVITPKVAEVLKLMEIYPKLVGLELRAAY 196
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 59.7 bits (138), Expect = 2e-07
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 QQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVD 239
+ +Q+IR +R + + + K ++ +A+K+ + A E L + + T ++
Sbjct: 34 RDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALLLSTNENIFK 92
Query: 240 VRDKLLENXVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGXIEII 413
+ +E+ V P + G IAP +VIP T + GP +T +AL + TK++ G IEI+
Sbjct: 93 IAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTKVTSGKIEIV 151
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXP 494
D ++K G+ V A +L L P
Sbjct: 152 EDAVVVKEGEIVSPKVANVLQTLGIKP 178
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 59.3 bits (137), Expect = 3e-07
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Frame = +3
Query: 57 AQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLV 236
A +Q++R +L G + M +NT+ A D L ++L ++ G + V+T +
Sbjct: 44 ADSLQKMRRNLLGKVEMRMVRNTLSTIAF-DSLPEGEKAKELAKYVDGQMLIVYTNDNPF 102
Query: 237 DVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGXIEII 413
+ L + A+ G IAP +VIP T P FQ + IP I G + I
Sbjct: 103 KLYKLLNATKSKRAAKGGDIAPSDIVIPKGPTSFKPGPLVGEFQQVGIPAGIEGGKVVIK 162
Query: 414 NDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAP 551
+ ++K G+K+ A A L L P GL + + + P
Sbjct: 163 DTKTVVKQGEKISAKLAEALTRLEIMPIDVGLNLMAAVEGHMLYKP 208
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 58.4 bits (135), Expect = 5e-07
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
Frame = +3
Query: 66 MQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVD 239
+QQIR G S + +G N +M AI E+ L KL P + G G +FT +
Sbjct: 53 LQQIREERAGDSRIFLGNNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFTNLSKKE 112
Query: 240 VRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGXIEIIN 416
V++ AR G A S+V+ P L +P K+ +G I ++
Sbjct: 113 VKEYFATVGAPVYARTGQTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQ 172
Query: 417 DVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSG 536
D + +PGD + A A LL + + + + + SG
Sbjct: 173 DTTVCEPGDTLSAEAAQLLKLFGVQSAKFKMDLTAHWTSG 212
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 57.6 bits (133), Expect = 8e-07
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +3
Query: 99 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENXVQAP 278
S+ M K+++ +A K NP L+P + GNVG +FT+GDL + +++ + V AP
Sbjct: 38 SVFAMVKHSIRLRAEKTG---NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 279 ARPGAIAPLSVVIPAHNTGL 338
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 57.6 bits (133), Expect = 8e-07
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Frame = +3
Query: 51 HEAQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTR 224
H + + R +V + K + + + H E NP L+P + GNVG + T+
Sbjct: 573 HGGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTK 632
Query: 225 GDLVDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGL 338
GDL +V ++ + V APAR G ++ + V++P NTGL
Sbjct: 633 GDLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 57.6 bits (133), Expect = 8e-07
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +3
Query: 162 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGL 338
NP L+P + GNVG +FT+GDL +V +++ + V APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 57.6 bits (133), Expect = 8e-07
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Frame = +3
Query: 69 QQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALE--KLLPHIKGNVGFVFTRGDLVDV 242
QQ+R S++G++ + MGKN +MR A+ E + + +L +KG G +FT V
Sbjct: 64 QQLRTSMKGYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRLLKGMTGLLFTSAPEEKV 123
Query: 243 RDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTSF-----FQALSIPTKISKGXIE 407
R L AR G +A ++VIP L +K SF + L +PT + I
Sbjct: 124 RSALASVARPCLARGGDVATKTIVIP--QGPLDRDKYSFALEPELRKLGLPTSLQNTVIH 181
Query: 408 IINDVHILKPGDKVGASEATLL 473
++ D + K GD + +++A LL
Sbjct: 182 VLCDHVLCKEGDVLTSAQARLL 203
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 57.2 bits (132), Expect = 1e-06
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Frame = +3
Query: 66 MQQIRISLRGHSIVLMGKNTMMRKAIKDH-LETNPALEKLLPHIKGNVGFVFTRGDLVDV 242
+Q++R L +++ K ++ +A+K LE + L L ++G + VF G+ +
Sbjct: 48 VQRVRKKLWKKYPMMVAKKRIILRAMKAAGLELDDNLLDDL--VRGQMLLVFADGNPFKI 105
Query: 243 RDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGXIEIIND 419
++ + V P +PG A + IP T L P S F L I ++ G I I +
Sbjct: 106 VKEVEKEKVAMPVKPGDKAETEIRIPEGMTNLTPGPILSVFGKLRIQYQVRGGKIYIAKE 165
Query: 420 VHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSGTIXAPAILR 563
+ KPGD + A LL L P G+ VK D G + +LR
Sbjct: 166 TVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGVLITEDLLR 213
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 51.6 bits (118), Expect = 5e-05
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Frame = +3
Query: 96 HSIVLMGKNTMMRKAI--KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENXV 269
HS + GKN +M A+ + E L ++ H++G VG +FT +V D+ +
Sbjct: 69 HSRIFFGKNKVMMVALGREPSSEYRENLHQVSKHLRGEVGLLFTNRTKEEV-DEWFSSFK 127
Query: 270 QAP-ARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGXIEIINDVHILKPGD 443
+ AR G A +V + P + L +PT + KG + +++D + K GD
Sbjct: 128 EVDFARAGNKATYTVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 187
Query: 444 KVGASEATLLNMLNXXPFSYGLVVKQVYDSGT 539
+ +A +L + + + +K +++S T
Sbjct: 188 ILTPEQARVLKLFGYEMAEFKVTIKFLWNSET 219
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 46.0 bits (104), Expect = 0.003
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 3/151 (1%)
Frame = +3
Query: 75 IRISLRGHSIVLMGKNTMMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRD 248
IR + +S GKN ++ A+ A L K +KG G +FT +V
Sbjct: 56 IRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEA 115
Query: 249 KLLENXVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGXIEIINDVH 425
+ E + AR G +A +VV+P + + L +PTK+ KG I +
Sbjct: 116 EFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFE 175
Query: 426 ILKPGDKVGASEATLLNMLNXXPFSYGLVVK 518
+ K G+ + +A +L + L+ K
Sbjct: 176 VCKEGEPLTVEQAKILKHFEVKMSQFRLIFK 206
>UniRef50_P33201 Cluster: mRNA turnover protein 4; n=12;
Saccharomycetales|Rep: mRNA turnover protein 4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 236
Score = 45.6 bits (103), Expect = 0.003
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Frame = +3
Query: 66 MQQIRISLRGHSIVLMGKNTMMRKAI--KDHLETNPALEKLLPHIKGNVGFVFTRGDLVD 239
+Q+IR S G ++ MGK +++KA+ K E L +L G G +FT D+
Sbjct: 53 LQEIRTSWAGSKLI-MGKRKVLQKALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNT 111
Query: 240 VRDKLLENXVQAPARPGAIAPLSVVIP---AHNTG---LGPEKTSFFQAL--------SI 377
V++ +RP APL+ IP ++ G E +L I
Sbjct: 112 VKEYFKSYVRSDYSRPNTKAPLTFTIPEGIVYSRGGQIPAEEDVPMIHSLEPTMRNKFEI 171
Query: 378 PTKISKGXIEIINDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDS 533
PTKI G I I + + G+K+ +A +L + + V YD+
Sbjct: 172 PTKIKAGKITIDSPYLVCTEGEKLDVRQALILKQFGIAASEFKVKVSAYYDN 223
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 43.2 bits (97), Expect = 0.018
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Frame = +3
Query: 69 QQIRISLRGHSIVLMGKNTMMRKAI-KD-HLETNPALEKLLPHIKGNVGFVFTRGDLVDV 242
+++R + + +G N ++R A+ +D E + L +KG+ G +FT DV
Sbjct: 54 KEMRAATEATTTFFVGSNKVLRVALGRDAESEASEGAATLGARVKGDCGVMFTNLSREDV 113
Query: 243 RDKLLENXVQAPARPGAIAPLSVVI---PAHN-TGLGPEKT--SFFQALSIPTKISKGXI 404
V+ AR GA+A +V + P H +G E T + +PTK+++G I
Sbjct: 114 ESVFERFAVKDYARTGALARETVTVEAGPVHGPSGALMEHTLEPTLRKNGMPTKLNRGVI 173
Query: 405 EIINDVHILKPGDKVGASEATLLNM 479
E+ + + K G + A LL +
Sbjct: 174 ELEANHTLCKEGQHISPQGAILLRL 198
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 43.2 bits (97), Expect = 0.018
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Frame = +3
Query: 66 MQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVD 239
+++IR +G S + MGK +M KA+ E A + KL + G VG +FT +
Sbjct: 53 LKRIRDDWKG-SRIFMGKTKVMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDE 111
Query: 240 VRDKLLENXVQAP-ARPGAIAPLSVVIPA----HNTGLGPEKTSFF---------QALSI 377
V E+ VQ AR GA+AP + VIPA G P + + L +
Sbjct: 112 VIG-YFESFVQNDFARAGAVAPFTHVIPAGPVYSRAGQIPVEDDILLTHTLEPQVRQLGM 170
Query: 378 PTKISKGXIEIINDVHILKPGDKVGASEATLLNM--LNXXPFSYGLV 512
PT + G + ++ D + G ++ + + LL + + F GL+
Sbjct: 171 PTVLKNGVVTLLADFPLCTEGQQLDSRQTRLLKLFGITAAEFKVGLL 217
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 42.7 bits (96), Expect = 0.024
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -3
Query: 361 KKEVFSGPR--PVL*AGMTTDNGAMAPGRAGAWTXFSNSLSRTSTRSPRVKTKPTFPLM* 188
++ +F R PVL G T A P RAGA T + + S TS +SP VK PT P
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 187 GSSFSRAGF 161
G+ + GF
Sbjct: 66 GTRLRKTGF 74
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 39.5 bits (88), Expect = 0.23
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 3/162 (1%)
Frame = +3
Query: 60 QQMQQIRISLRGHSIVLMGKNTMMRKAI-KDHLET-NPALEKLLPHIKGNVGFVFTRGDL 233
Q++ +IR ++ + L G N + A+ K H ++ P L L ++KG +FT+
Sbjct: 45 QKVSEIRKNMPDIKL-LFGINKVTVWALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSP 103
Query: 234 VDVRDKLLENXVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGXIEI 410
++R++L RPGA A +V I + P + L +P K+ +G + +
Sbjct: 104 SELREQLDAFRSAEYCRPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHL 163
Query: 411 INDVHILKPGDKVGASEATLLNMLNXXPFSYGLVVKQVYDSG 536
D + D + + +L + + + + V+ G
Sbjct: 164 ERDYLVCNSEDVLSPEQCRILKLFQIEMSEFRVGLLAVWTDG 205
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 38.3 bits (85), Expect = 0.52
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 105 VLMGKNTMMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENXVQAP 278
+ GK + +A+ E A L+KL ++ G+VG +FT D +++D + N Q
Sbjct: 65 IFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFV-NLTQVD 123
Query: 279 -ARPGAIAPLSVVIPA 323
AR G++A ++ IP+
Sbjct: 124 FARAGSVATRTITIPS 139
>UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04875.1 - Gibberella zeae PH-1
Length = 506
Score = 36.7 bits (81), Expect = 1.6
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Frame = -3
Query: 550 GAKMVPESYTCLTTRPYEKGXMFNMLRRVASEAPTLSPGFRIWTSLIISIXPFEI-LVGM 374
G M+ +Y LT YEKG +N SEA LSP +RI + + +I +
Sbjct: 178 GTLMLLNNYITLTAEAYEKGETYNPPPLDGSEASNLSPSYRIAARIPDKLPQAQIDRLNA 237
Query: 373 ERAWKKEVFSGPRPVL*AGMTTDNGAMAPGR--AGAWTXFSNSLSRTSTRSPRVKTKPT 203
A K V S P + + G + PGR A T + VK PT
Sbjct: 238 MAAQKAAVASDP-SIQVLALPFRKGEIVPGRHQRVALTLTEKETQQLLAACKNVKATPT 295
>UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Rep:
AER172Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1268
Score = 35.1 bits (77), Expect = 4.9
Identities = 23/107 (21%), Positives = 47/107 (43%)
Frame = -2
Query: 509 KTIRKGXXVQHVEKSSFRSSHLITRLQDMDIIDNFNXTL*NLSGDGKSLEERSLLRTKAS 330
+T +G V H++ S L + DI++NFN N D ++L +R L
Sbjct: 240 QTDSQGKLVVHLQISKDTLPKLRVN-KTQDIVENFNKIYHNFENDKETLLKRLKLEENDK 298
Query: 329 VMSGNDDRQWSNGSRTSRGLDXVLQQFITHINKISTGEDKANISLDV 189
++ + R++S+ + G+D +++ + K ++L V
Sbjct: 299 LLEYDKKRKYSDKANEEAGIDSIIEDSEPDVKKSRNSISSLPVNLGV 345
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 847,039,756
Number of Sequences: 1657284
Number of extensions: 14533991
Number of successful extensions: 38729
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 37248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38679
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 160908510525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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