Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_H02_e592_16.seq
(1499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 33 0.58
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 31 1.8
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 31 1.8
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489... 31 1.8
04_03_0937 + 20923705-20923833,20924001-20924012,20924413-209244... 31 2.4
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 30 4.1
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 30 4.1
05_04_0140 - 18358997-18359082,18359255-18359318,18359469-183595... 30 4.1
12_01_0079 + 644754-645932,645966-646061,646193-647122 30 5.4
11_01_0078 + 609005-610183,610217-610312,610444-611373 30 5.4
08_02_0902 - 22408895-22409620,22410190-22410326,22410550-224106... 30 5.4
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 30 5.4
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 30 5.4
01_06_0773 - 31883625-31884212 30 5.4
05_07_0286 - 28988294-28988383,28988486-28989007,28989117-289897... 29 9.5
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +2
Query: 560 RRTTKKRENKKDDLTREMKVDAEKNRRKKTANVEERRQRSPKTAIVEERR 709
RR ++R+ ++++ R + D E+ +RK+ ER+++ K EE++
Sbjct: 134 RRRRRRRKEREEEERRRRRKDKERRKRKEKERERERKKKEKKKRRKEEKK 183
>09_04_0512 + 18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 548 KLDVRRTTKKRENKKDDLTREMKVDAEKNRRKKTANVEERRQRSPKTAIVEERR 709
KL+ R +++E K+ ++ K DA+ +K+ EER+++ K EE R
Sbjct: 1354 KLERERLKQEKELKQKQEEQKKKRDADVAAKKRQRGEEERKEKQRKRKCTEEAR 1407
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 31.5 bits (68), Expect = 1.8
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 566 TTKKRENKKDDLTREMKVDAEKNRRKKTANVEERRQRSPKTAIVEERRLPSPKKED 733
T K E +K+D E K D EK +++ +E+ + K EE +L +K+D
Sbjct: 215 TEKDNEKEKEDKEEETKKDNEK-EKEQLMGTDEKEKEKEKEDENEEEKLEEEEKKD 269
>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
28649069-28649144,28649356-28649426,28649524-28649589,
28649677-28649766,28649874-28650050,28650513-28650548
Length = 1442
Score = 31.5 bits (68), Expect = 1.8
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +1
Query: 529 KNVGSLKTGREKNN*KEGEQER*FNEGNESRRRKEPEKEDCKC*RKKTAIAEDCNRRRKK 708
K GSL+T RE+ K+ E R E E ++ E E+E + +K ++ R R+K
Sbjct: 1101 KEQGSLRTERERE--KDKEASRRLEETKERDKKFEKEREIAEERERKKLEEQEREREREK 1158
Query: 709 TAIAEE 726
+A E
Sbjct: 1159 DRLAVE 1164
>04_03_0937 +
20923705-20923833,20924001-20924012,20924413-20924473,
20924523-20924749,20924859-20925104,20925645-20925657,
20927681-20928302,20928320-20928949,20928960-20929224
Length = 734
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 575 KRENKKDDLTREMKVDAEKNRRKKTANVEERRQRSPKTAIVEERRLPSPKKEDCT 739
+ EN+ +T + + EKN RK+ + EE ++R + ++R + K EDC+
Sbjct: 124 EHENQGSHITITSRANGEKNMRKRQSEEEEAKKREEEA----KKRDEASKVEDCS 174
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 572 KKRENKKDDLTREMKVDAEKNRRKKTANVEERRQRS 679
KK + KKD TR DA K ++K+ EERR S
Sbjct: 393 KKGKGKKDFGTRSAPHDARKTSKRKSPLFEERRNSS 428
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 518 KRYQKTWEA*KLDVRRTTKKRE--NKKDDLTREMKVDAEKNRRKKTANVEERRQR 676
K YQ+ E + R +KRE ++DD E D K RR+ + +EER++R
Sbjct: 506 KEYQRQHEKEREKDRERERKREIMKQEDDSDEE---DNRKRRRRSSGTLEERKRR 557
>05_04_0140 -
18358997-18359082,18359255-18359318,18359469-18359583,
18360101-18360216,18360420-18360541,18360628-18360757,
18361328-18361420
Length = 241
Score = 30.3 bits (65), Expect = 4.1
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 685 LRRSLSSFFNICSLLSPVLFGVYFHFPR*IIFLVLPLFSCSSHV-QFSGFPRFLVSFDQY 509
L SLSSFF S G H ++FLVL LFSC ++V +G F +S ++
Sbjct: 131 LTLSLSSFFTEFSQPKLTHVGYTIHGNVYLVFLVLVLFSCLTYVHNANGIESFNLSRQEH 190
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 557 VRRTTKKRENKK-DDLTREMKVDAEKNRRKKTAN-VEERRQRSPKTAIVEER 706
V + +K E K+ L +EM + E+ +R++ A VEERR+ + A EER
Sbjct: 211 VEKAKRKAEEKRLARLEKEMLEEEERKQREEMAKLVEERRRLRDEKAEAEER 262
>11_01_0078 + 609005-610183,610217-610312,610444-611373
Length = 734
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 557 VRRTTKKRENKK-DDLTREMKVDAEKNRRKKTAN-VEERRQRSPKTAIVEER 706
V + +K E K+ L +EM + E+ +R++ A VEERR+ + A EER
Sbjct: 211 VEKAKRKAEEKRLARLEKEMLEEEERKQREEMAKLVEERRRLRDEKAEAEER 262
>08_02_0902 -
22408895-22409620,22410190-22410326,22410550-22410685,
22410787-22411224
Length = 478
Score = 29.9 bits (64), Expect = 5.4
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 566 TTKKRENKKDDLTREMKVDAE-KNRRKKTANVEERRQ 673
T +NKKDD+T+ +VD E K + A VEE+ Q
Sbjct: 393 TVVVEDNKKDDVTKTKQVDGENKVDMRIEATVEEKHQ 429
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 29.9 bits (64), Expect = 5.4
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = +2
Query: 668 RQRSPKTAIVEERRLPSPKKEDCTXDEG*LHRR*-----KMTAPPRKMTAPPRR*LHXRE 832
R+RSP RRL SP+ D G RR + PPR+M +PPRR R
Sbjct: 313 RRRSPSPP---PRRLRSPRHLSPRRDRGSPIRRRSPLPRRRLTPPRRMWSPPRRPQSLRH 369
Query: 833 EXSQPAEKXXR 865
P + R
Sbjct: 370 RSRSPIHRPIR 380
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 29.9 bits (64), Expect = 5.4
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Frame = +3
Query: 444 NTIS*EKTNKES*DDNRRKLN*Y*SKDTKKRGKPENWT*EEQLKRGRTRKMI*RGK*K*T 623
NTI+ + NK S K+ +++ ++R + + E +++R R ++ I GK
Sbjct: 168 NTIT--EANKPSLSPEEMKIK---AQELRERARKKKEEEERRMEREREKERIRIGKELLE 222
Query: 624 PKRT---GERR----LQMLKKEDSDRRR--LQSSKKEDCHRRRRKTAPPMKD 752
KR ER+ L+ L+KE+ R R ++ +ED RRRK P +D
Sbjct: 223 AKRIEEDNERKRMIELRRLEKEEEKRAREKIRQKLEEDKAERRRKLGLPPED 274
>01_06_0773 - 31883625-31884212
Length = 195
Score = 29.9 bits (64), Expect = 5.4
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +1
Query: 628 KEPEKEDCKC*RKKTAIAEDCNRRRKKTAIAEEGRLHXR*RMTAPPMKDDCTAEKDDCTA 807
KE EKE K + + A RRRK+TA G APP + EK+ A
Sbjct: 97 KEKEKEKAKAAQAQAPAAARRRRRRKETADEAAGGRAASNAAAAPPTRVGSEGEKERLLA 156
Query: 808 EK 813
+
Sbjct: 157 NE 158
>05_07_0286 - 28988294-28988383,28988486-28989007,28989117-28989758,
28990554-28990597,28990836-28991016
Length = 492
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 1394 RPNXGWGIGGFPRXSPPGVSPEKFPRQKPFPGLXGVXKGFG 1272
RP + P PP +P FP PFP G G G
Sbjct: 332 RPVADGAVLPAPMQQPPPATPPFFPPSIPFPASSGAGDGTG 372
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,082,268
Number of Sequences: 37544
Number of extensions: 515645
Number of successful extensions: 1495
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4803272712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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