Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_G12_e671_14.seq
(1528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 250 1e-65
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 250 1e-65
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 250 1e-65
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 250 1e-65
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 250 1e-65
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 250 1e-65
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 250 1e-65
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 250 1e-65
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 250 1e-65
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 250 1e-65
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 250 1e-65
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 250 1e-65
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 250 1e-65
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 250 1e-65
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 247 1e-64
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 77 2e-13
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 33 2.1
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 33 2.1
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 33 2.1
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 33 2.1
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 33 2.1
X05418-1|CAA28991.1| 215|Homo sapiens keratin type II (AA1-215)... 31 8.4
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 250 bits (612), Expect = 1e-65
Identities = 126/206 (61%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 247 bits (604), Expect = 1e-64
Identities = 125/206 (60%), Positives = 149/206 (72%), Gaps = 1/206 (0%)
Frame = +1
Query: 178 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 357
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 358 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 537
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 538 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 714
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 715 RSIAKLVGIRAKRLKDAAENPDDVTK 792
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 77.0 bits (181), Expect = 2e-13
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +1
Query: 592 KLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAE 771
KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE 61
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing factor
protein.
Length = 707
Score = 33.5 bits (73), Expect = 2.1
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 1270 PPXXLGXPNXGXXPXXXEPPXXEXXPXLXXPXPPLARXGXXPFFXXPXPPKXXXPXPSPX 1449
PP P P PP P P PP A P P PP P P
Sbjct: 125 PPASSSAPPA-TPPTSGAPPGSGPGPT---PTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 180
Query: 1450 XGGP 1461
GGP
Sbjct: 181 AGGP 184
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 33.5 bits (73), Expect = 2.1
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 1270 PPXXLGXPNXGXXPXXXEPPXXEXXPXLXXPXPPLARXGXXPFFXXPXPPKXXXPXPSPX 1449
PP P P PP P P PP A P P PP P P
Sbjct: 125 PPASSSAPPA-TPPTSGAPPGSGPGPT---PTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 180
Query: 1450 XGGP 1461
GGP
Sbjct: 181 AGGP 184
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 33.5 bits (73), Expect = 2.1
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 1270 PPXXLGXPNXGXXPXXXEPPXXEXXPXLXXPXPPLARXGXXPFFXXPXPPKXXXPXPSPX 1449
PP P P PP P P PP A P P PP P P
Sbjct: 125 PPASSSAPPA-TPPTSGAPPGSGPGPT---PTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 180
Query: 1450 XGGP 1461
GGP
Sbjct: 181 AGGP 184
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 33.5 bits (73), Expect = 2.1
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 1270 PPXXLGXPNXGXXPXXXEPPXXEXXPXLXXPXPPLARXGXXPFFXXPXPPKXXXPXPSPX 1449
PP P P PP P P PP A P P PP P P
Sbjct: 52 PPASSSAPPA-TPPTSGAPPGSGPGPT---PTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 107
Query: 1450 XGGP 1461
GGP
Sbjct: 108 AGGP 111
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 33.5 bits (73), Expect = 2.1
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 1270 PPXXLGXPNXGXXPXXXEPPXXEXXPXLXXPXPPLARXGXXPFFXXPXPPKXXXPXPSPX 1449
PP P P PP P P PP A P P PP P P
Sbjct: 125 PPASSSAPPA-TPPTSGAPPGSGPGPT---PTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 180
Query: 1450 XGGP 1461
GGP
Sbjct: 181 AGGP 184
>X05418-1|CAA28991.1| 215|Homo sapiens keratin type II (AA1-215)
protein.
Length = 215
Score = 31.5 bits (68), Expect = 8.4
Identities = 23/72 (31%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Frame = -3
Query: 1445 GXGXGXXXXGGXGXXK-KGLXPXRARGGXGXXXXGLXSXXGGSXXXGXXPXFGXPXXXGG 1269
G G G GG G + G A G G G GG G FG P G
Sbjct: 98 GSGYGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPGSLGS 157
Query: 1268 PXAXX-XGFPXG 1236
P GFP G
Sbjct: 158 PGGFAPGGFPGG 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,527,441
Number of Sequences: 237096
Number of extensions: 3792228
Number of successful extensions: 15173
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 14136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15037
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22745790610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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