Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_G11_e663_13.seq
         (1556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   1.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   3.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   6.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 17/68 (25%), Positives = 28/68 (41%)
 Frame = +3

Query: 579 HILFSLIYPHRGRCF*FLLCTNFGTYYY**VLVFIINRFFCTKIYLMATL*XINLSMLEF 758
           H+LF   +        FLLC     Y+Y  +++ +   +FC    +  T      S+   
Sbjct: 265 HLLFCCAFIIFTMHLLFLLCIY---YFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPL 321

Query: 759 KRYFYKNI 782
           K  FY N+
Sbjct: 322 KSTFYLNV 329


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 63  IRHEGLFLYLIFGHFEQY 116
           IRH G + Y    HFEQY
Sbjct: 70  IRHHGQWNYSPDNHFEQY 87


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +2

Query: 452 FLHQTLSRFARLLSSNPSSPHRVRLPSCTSRHWSFNFAVNNISHFI 589
           F H  L   A   +S PS P    LP+  SR  + N  V++ +  I
Sbjct: 56  FFHPGLLPLAWQANSPPSPPAPSELPALKSRKLNNNNVVSSTNQEI 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,802
Number of Sequences: 336
Number of extensions: 4919
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46910650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)