Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_G10_e655_14.seq
(1598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 43 5e-04
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 43 7e-04
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 43 7e-04
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 42 0.002
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 42 0.002
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 42 0.002
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 43.2 bits (97), Expect = 5e-04
Identities = 30/93 (32%), Positives = 36/93 (38%)
Frame = +2
Query: 392 PXXRSXDPXDFXFGXAVXXNIWTXXHYTEXAXLXRXRLKXRSXXIXXX*LXTXDXX*HTX 571
P + P +F FG + N W HYTE A L L H+
Sbjct: 80 PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSL 139
Query: 572 YGGGXAPXWAPLLXSKXREDXXDXIMXTYCVXP 670
GGG LL SK RE+ D IM T+ V P
Sbjct: 140 -GGGTGSGMGTLLISKIREEYPDRIMMTFSVVP 171
Score = 35.1 bits (77), Expect = 0.14
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = +1
Query: 262 DSDLQDGDASMXITXRLSGGIVRCPXPS*XDLXPXTMDSVXSGPXXQIXRPGRLXF 429
DSDLQ ++ G V P DL P TMDSV +GP Q+ RP F
Sbjct: 39 DSDLQLERINVYYNEASGGKYV--PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVF 92
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 42.7 bits (96), Expect = 7e-04
Identities = 29/93 (31%), Positives = 36/93 (38%)
Frame = +2
Query: 392 PXXRSXDPXDFXFGXAVXXNIWTXXHYTEXAXLXRXRLKXRSXXIXXX*LXTXDXX*HTX 571
P + P ++ FG + N W HYTE A L L H+
Sbjct: 80 PFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSL 139
Query: 572 YGGGXAPXWAPLLXSKXREDXXDXIMXTYCVXP 670
GGG LL SK RE+ D IM T+ V P
Sbjct: 140 -GGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Score = 33.9 bits (74), Expect = 0.32
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 352 DLXPXTMDSVXSGPXXQIXRPGRLXF 429
DL P TMDSV SGP Q+ RP F
Sbjct: 67 DLEPGTMDSVRSGPFGQLFRPDNYVF 92
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 42.7 bits (96), Expect = 7e-04
Identities = 29/93 (31%), Positives = 36/93 (38%)
Frame = +2
Query: 392 PXXRSXDPXDFXFGXAVXXNIWTXXHYTEXAXLXRXRLKXRSXXIXXX*LXTXDXX*HTX 571
P + P ++ FG + N W HYTE A L L H+
Sbjct: 80 PFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSL 139
Query: 572 YGGGXAPXWAPLLXSKXREDXXDXIMXTYCVXP 670
GGG LL SK RE+ D IM T+ V P
Sbjct: 140 -GGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Score = 33.9 bits (74), Expect = 0.32
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 352 DLXPXTMDSVXSGPXXQIXRPGRLXF 429
DL P TMDSV SGP Q+ RP F
Sbjct: 67 DLEPGTMDSVRSGPFGQLFRPDNYVF 92
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 41.5 bits (93), Expect = 0.002
Identities = 29/93 (31%), Positives = 36/93 (38%)
Frame = +2
Query: 392 PXXRSXDPXDFXFGXAVXXNIWTXXHYTEXAXLXRXRLKXRSXXIXXX*LXTXDXX*HTX 571
P + P +F FG + N W HYTE A L L H+
Sbjct: 80 PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSL 139
Query: 572 YGGGXAPXWAPLLXSKXREDXXDXIMXTYCVXP 670
GGG LL SK RE+ D IM ++ V P
Sbjct: 140 -GGGTGSGMGTLLISKIREEFPDRIMSSFSVVP 171
Score = 34.3 bits (75), Expect = 0.24
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 352 DLXPXTMDSVXSGPXXQIXRPGRLXF 429
DL P TMDSV SGP Q+ RP F
Sbjct: 67 DLEPGTMDSVRSGPFGQLFRPDNFVF 92
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 41.5 bits (93), Expect = 0.002
Identities = 29/93 (31%), Positives = 36/93 (38%)
Frame = +2
Query: 392 PXXRSXDPXDFXFGXAVXXNIWTXXHYTEXAXLXRXRLKXRSXXIXXX*LXTXDXX*HTX 571
P + P +F FG + N W HYTE A L L H+
Sbjct: 80 PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSL 139
Query: 572 YGGGXAPXWAPLLXSKXREDXXDXIMXTYCVXP 670
GGG LL SK RE+ D IM ++ V P
Sbjct: 140 -GGGTGSGMGTLLISKIREEYPDRIMSSFSVVP 171
Score = 34.3 bits (75), Expect = 0.24
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 352 DLXPXTMDSVXSGPXXQIXRPGRLXF 429
DL P TMDSV SGP Q+ RP F
Sbjct: 67 DLEPGTMDSVRSGPFGQLFRPDNFVF 92
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 41.5 bits (93), Expect = 0.002
Identities = 29/93 (31%), Positives = 36/93 (38%)
Frame = +2
Query: 392 PXXRSXDPXDFXFGXAVXXNIWTXXHYTEXAXLXRXRLKXRSXXIXXX*LXTXDXX*HTX 571
P + P +F FG + N W HYTE A L L H+
Sbjct: 80 PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSL 139
Query: 572 YGGGXAPXWAPLLXSKXREDXXDXIMXTYCVXP 670
GGG LL SK RE+ D IM ++ V P
Sbjct: 140 -GGGTGSGMGTLLISKIREEYPDRIMSSFSVVP 171
Score = 34.3 bits (75), Expect = 0.24
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 352 DLXPXTMDSVXSGPXXQIXRPGRLXF 429
DL P TMDSV SGP Q+ RP F
Sbjct: 67 DLEPGTMDSVRSGPFGQLFRPDNFVF 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,866,020
Number of Sequences: 27780
Number of extensions: 130040
Number of successful extensions: 98
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4639367406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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