Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_G08_e639_14.seq
         (1585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    27   2.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    26   2.6  
AY752896-1|AAV30070.1|  105|Anopheles gambiae peroxidase 4A prot...    25   4.5  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 26.6 bits (56), Expect = 2.0
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +2

Query: 182 LIISIMAW--RSHGVTNFDMIQKLKANGIVKS 271
           LI +I AW  R HG  NF M Q L  +G  +S
Sbjct: 864 LIPNIAAWTSRKHGEVNFYMTQFLSDHGCFRS 895


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +2

Query: 182  LIISIMAW--RSHGVTNFDMIQKLKANGIVKSD 274
            +I  I AW  R HG  NF + Q L  +G  + D
Sbjct: 921  VIPDIAAWHFRRHGEVNFHLSQVLSGHGFFRDD 953


>AY752896-1|AAV30070.1|  105|Anopheles gambiae peroxidase 4A
           protein.
          Length = 105

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -3

Query: 461 NQNPHLTLFHQ 429
           NQ+PHLTL HQ
Sbjct: 3   NQSPHLTLLHQ 13


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 992,773
Number of Sequences: 2352
Number of extensions: 18412
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 68
effective length of database: 404,043
effective search space used: 185455737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)