Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_G07_e631_13.seq
(1589 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 235 9e-62
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 168 1e-41
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 5e-18
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 77 3e-14
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 61 3e-09
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 5e-09
SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.63
SB_7694| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-28) 31 1.9
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 31 2.6
SB_20073| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-18) 31 2.6
SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45) 30 5.9
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 30 5.9
SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17) 29 7.8
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 235 bits (574), Expect = 9e-62
Identities = 116/240 (48%), Positives = 155/240 (64%)
Frame = +1
Query: 136 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIXCAFVYGNEKEVGEAIKTKIQEG 315
L+NG ++PV+G+GTWKSKPG+V AVK AI GYRHI CA+ Y NEKEVG+A++ ++
Sbjct: 6 LNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALR-ELLGS 64
Query: 316 VVKREDLFITSKLWNTFHRPDLVRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTD 495
VV+R+DLFITSKLWNT H P VR SL++L +DYLDLYLIHWP ++++ D FP D
Sbjct: 65 VVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRDGDEFFPKD 124
Query: 496 ADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPGH*PGRMP 675
G + ++ D DTWKA+E LV GLV+++G+SNFNSKQ+ I A +KP
Sbjct: 125 EQGNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNFNSKQVDDICAIARIKPVANQVECH 184
Query: 676 SVFKPXAIEAVLRRP*YYDNGVLPRWGXPDRPWAKPGDPHLMEDPKLKEIADRLGKXAAQ 855
+ + ++ P G DRPWAKP DPH+M DP + +ADR + AQ
Sbjct: 185 PLLNQAKLIDHHKKHNIQTIAYSP-LGSLDRPWAKPDDPHVMRDPTMVAMADRYSRTVAQ 243
Score = 37.9 bits (84), Expect = 0.022
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 653 VTNQVECHPYLNXKRLKQFCEDRDIMITXYSPXGXL 760
V NQVECHP LN +L + +I YSP G L
Sbjct: 177 VANQVECHPLLNQAKLIDHHKKHNIQTIAYSPLGSL 212
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 168 bits (408), Expect = 1e-41
Identities = 79/159 (49%), Positives = 112/159 (70%)
Frame = +1
Query: 175 TWKSKPGEVTQAVKDAIDIGYRHIXCAFVYGNEKEVGEAIKTKIQEGVVKREDLFITSKL 354
TW+S EV AV+ AI++GYRHI CA +YGNE E+GEA+ + EG VKRE+LF+TSKL
Sbjct: 59 TWQSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKL 118
Query: 355 WNTFHRPDLVRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDADGKIQFSDVDYV 534
W H PD V A + +L+NL +DYLDLYLIH P A+K+ + + A+G I ++
Sbjct: 119 WCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQ 178
Query: 535 DTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKP 651
+TW+A+E LV GL +++GVSNF+ K+L ++L+ AS+ P
Sbjct: 179 NTWQAMEGLVAKGLCKAIGVSNFSVKRLNKLLETASIVP 217
Score = 52.0 bits (119), Expect = 1e-06
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +1
Query: 175 TWKSKPGEVTQAVKDAIDIGYRHIXCAFVYGNEKEVGEAIKTKIQEGVVKREDLFITSKL 354
TW S G+V AV+ A ++GYR I CA ++GNE GEA+ + +G VKRE+ T
Sbjct: 6 TWHSYKGKVGNAVRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREECGST--- 59
Query: 355 WNTFHRP--DLVRGALEVSLRNLNIDYLDLY 441
W + + VR A+E+ R +ID ++Y
Sbjct: 60 WQSSKEEVGNAVRLAIELGYR--HIDCAEIY 88
Score = 34.3 bits (75), Expect(2) = 5e-04
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 659 NQVECHPYLNXKRLKQFCEDR 721
NQVE HPYL ++LK+FC+ +
Sbjct: 220 NQVELHPYLPQEKLKEFCDSK 240
Score = 28.3 bits (60), Expect(2) = 5e-04
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 695 RLKQFCEDRDIMITXYSPXG 754
+ K FC+ + I++T YSP G
Sbjct: 280 KCKDFCDSKGILLTAYSPLG 299
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 89.8 bits (213), Expect = 5e-18
Identities = 65/172 (37%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
Frame = +1
Query: 136 LSNGAKIPVIGIGTWKSKPGEVT-QAVKDAIDIGYRHIXCAFVYG-NEKEVGEAIKTKIQ 309
L++G +PV+G GT + GE T VK A++ GYR I A Y +E +V +AI
Sbjct: 331 LASGYTMPVMGFGT--ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVAKAIA---- 384
Query: 310 EGVVKREDLFITSKLWNTFHRPDLVRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFP 489
+ + R+D+FI +KL + + ++E+SLR L+ DY+DL+LIH K D
Sbjct: 385 DSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIH----SKTCDDFLL 440
Query: 490 TDADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASV 645
T A+G+ + + + ++WKA+E L G +RSLGVSNFN +LQ +++ A+V
Sbjct: 441 TCAEGEPRGT---WKESWKAMEELHRQGKIRSLGVSNFNVDELQELVNFATV 489
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 77.4 bits (182), Expect = 3e-14
Identities = 56/172 (32%), Positives = 87/172 (50%)
Frame = +1
Query: 136 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIXCAFVYGNEKEVGEAIKTKIQEG 315
+++G KIP++G+G QAV A++ GYR I A Y NE+ VGEA++
Sbjct: 70 MNDGRKIPLLGLGAHDIHS---KQAVLWALESGYRLIDTASRYHNEQSVGEAVRCSN--- 123
Query: 316 VVKREDLFITSKLWNTFHRPDLVRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTD 495
+ R ++++ +K++ T H A SL L + Y+DLYLIH+P P+
Sbjct: 124 -IPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFP---------VPSG 173
Query: 496 ADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKP 651
V +W+A+ L GL+RS+GVSNFN + L+ + V P
Sbjct: 174 V-----------VGSWQAMIDLRSRGLIRSIGVSNFNIQHLEALRQQTGVVP 214
Score = 39.9 bits (89), Expect = 0.006
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 659 NQVECHPYLNXKRLKQFCEDRDIMITXYSP--XGXLPTDPGLSLV 787
NQ+E HP+L K L Q+C+ +I I +SP G DP LS V
Sbjct: 217 NQIEVHPFLQMKELTQYCKRHNITIQAFSPLTKGEKLCDPILSYV 261
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 60.9 bits (141), Expect = 3e-09
Identities = 36/95 (37%), Positives = 53/95 (55%)
Frame = +1
Query: 133 TLSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIXCAFVYGNEKEVGEAIKTKIQE 312
TLS+G KIP G+G + QAV A++ GYR I A Y NEK VGEA++ E
Sbjct: 2 TLSDGYKIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEALR----E 57
Query: 313 GVVKREDLFITSKLWNTFHRPDLVRGALEVSLRNL 417
V R ++++ +K+++T H + A + SL L
Sbjct: 58 SAVPRSEVYLVTKVYHTDHGYEKTMKAYDRSLSAL 92
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 60.1 bits (139), Expect = 5e-09
Identities = 45/136 (33%), Positives = 70/136 (51%)
Frame = +1
Query: 220 AIDIGYRHIXCAFVYGNEKEVGEAIKTKIQEGVVKREDLFITSKLWNTFHRPDLVRGALE 399
A+ GYR + A +Y NEKEVG A++ + +KRED+++T+KL + +
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVR----KSGLKREDIYVTTKLKPSEEGHSNALKYAK 108
Query: 400 VSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDADGKIQFSDVDYVDTWKALEPLVCHGLV 579
S++ L+I Y+DL+LIH P+ G I + + AL L GL+
Sbjct: 109 ESIKKLDIGYVDLFLIHTPR-------------PGNI-------IAAYDALLTLKEEGLI 148
Query: 580 RSLGVSNFNSKQLQRI 627
RS+GVSNF L+ +
Sbjct: 149 RSVGVSNFGVHHLEEL 164
>SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 33.1 bits (72), Expect = 0.63
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +1
Query: 199 VTQAVKDAIDIGYRHIXCAFVYGNEKEVGEAIKTKIQEGVVKREDLFITSKLWNTFHRPD 378
V + + + I Y + C V+G + I+T +++G + LF+ + W D
Sbjct: 260 VPEKITNIIRKSYEEMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 319
Query: 379 LVRGALEVSL-RNL-NIDYLDLYLIHWPQAYKEDDAIFPTDADGKI 510
R ++ +L + L ++D+ DL L+ Q ++ D K+
Sbjct: 320 QKRNGIQWTLWKQLDDLDFADLALLFHTQQQMQEKTNIVADNSAKL 365
>SB_7694| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-28)
Length = 329
Score = 31.5 bits (68), Expect = 1.9
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -3
Query: 312 LLNLSLYSLTHFLLVSIDKCAVYVSISDVYGIL 214
+L + Y++T +++ I KCA++ S VYG++
Sbjct: 167 VLGMDTYNVTFCVVMGICKCAIFTSYIQVYGVI 199
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 31.5 bits (68), Expect = 1.9
Identities = 19/86 (22%), Positives = 40/86 (46%)
Frame = +1
Query: 379 LVRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDADGKIQFSDVDYVDTWKALEP 558
+V +++ S++ + +D LD+ HW +SD Y+D L
Sbjct: 5 VVEASIQKSMKRMAVDKLDMVQFHW------------------WDYSDKRYLDALLHLSE 46
Query: 559 LVCHGLVRSLGVSNFNSKQLQRILDN 636
L G ++ + ++NF++ ++Q I D+
Sbjct: 47 LQSEGKIQEISLTNFDTNRMQEITDH 72
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 397 EVSLRNLNIDYLDLYLIHW 453
E SL L ID +DLYL+HW
Sbjct: 49 EKSLERLGIDRIDLYLLHW 67
>SB_20073| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-18)
Length = 593
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 514 TGSYRPHPLGRSHRLLCKPGASGSDRD 434
TG YRP P+G+ RL GASG+ RD
Sbjct: 123 TGPYRPDPIGKCDRLQ-SDGASGNIRD 148
>SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45)
Length = 565
Score = 29.9 bits (64), Expect = 5.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 547 ALEPLVCHGLVRSLGVSNFNSKQLQRILD 633
A E + C G++RSL + N ++Q+QR D
Sbjct: 104 ASEEIKCRGVIRSLRIENKQAEQVQRATD 132
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 29.9 bits (64), Expect = 5.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -1
Query: 614 CFELKFETPRLRTSPWHTRGSRAFHVST*STSENWIL 504
C++L+F+ P TS H RG+R ++T T ++W++
Sbjct: 1169 CWDLRFQLPI--TSLSHPRGARIRRLATHPTEQSWVV 1203
>SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17)
Length = 321
Score = 29.5 bits (63), Expect = 7.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 172 GTWKSKPGEVTQAVKDAIDIGYRHIXCA 255
G+W + P +VT ++ +D+G RH+ CA
Sbjct: 209 GSWCASPSDVTPFLQ--VDLGTRHVICA 234
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,964,238
Number of Sequences: 59808
Number of extensions: 591260
Number of successful extensions: 1465
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5211572988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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