Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_G07_e631_13.seq
         (1589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   4.2  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   5.5  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    23   5.5  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   7.3  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 660 LVTWFHRGVVEYPLELLRVEVRDTEAADEPVAH 562
           L  W +RGV  + ++ +     D    DEP A+
Sbjct: 209 LTFWMNRGVDGFRIDAINHMFEDARLLDEPSAN 241


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 190 PGEVTQAVKDAIDIGYRHIXCAFVYGNEK 276
           PG+++      +D    HI C F    EK
Sbjct: 350 PGQISNGYTPVLDCHTAHIACKFAEIKEK 378


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 190 PGEVTQAVKDAIDIGYRHIXCAFVYGNEK 276
           PG+++      +D    HI C F    EK
Sbjct: 61  PGQISNGYTPVLDCHTAHIACKFAEIKEK 89


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 190 PGEVTQAVKDAIDIGYRHIXCAFVYGNEK 276
           PG+++      +D    HI C F    EK
Sbjct: 350 PGQISNGYTPVLDCHTAHIACKFADIKEK 378


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,093
Number of Sequences: 438
Number of extensions: 5652
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 55984500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)