Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_G06_e623_14.seq
         (1557 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010866-1|AAH10866.1|  219|Homo sapiens TRAPPC4 protein protein.      97   1e-19
AF151862-1|AAD34099.1|  219|Homo sapiens CGI-104 protein protein.      97   1e-19
AF105025-1|AAF21897.1|  219|Homo sapiens unknown protein.              97   1e-19

>BC010866-1|AAH10866.1|  219|Homo sapiens TRAPPC4 protein protein.
          Length = 219

 Score = 97.5 bits (232), Expect = 1e-19
 Identities = 43/97 (44%), Positives = 62/97 (63%)
 Frame = +3

Query: 81  MXIYGVYXXSKSGGLIYNYDHNIPKVETEKTFGYPLDIKLHHENKKIXVSFGXXDGINVG 260
           M I+ VY  +K+GGLIY  D   P+ E EKTF YPLD+ L   ++++ V+FG  DGI VG
Sbjct: 1   MAIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVG 60

Query: 261 NVLLTVNGSPXNGKTTDDGREVXXILEIKXXYPLNLK 371
           + +L +NG   NG+ T DG+EV   L     YP++++
Sbjct: 61  HAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIR 97


>AF151862-1|AAD34099.1|  219|Homo sapiens CGI-104 protein protein.
          Length = 219

 Score = 97.5 bits (232), Expect = 1e-19
 Identities = 43/97 (44%), Positives = 62/97 (63%)
 Frame = +3

Query: 81  MXIYGVYXXSKSGGLIYNYDHNIPKVETEKTFGYPLDIKLHHENKKIXVSFGXXDGINVG 260
           M I+ VY  +K+GGLIY  D   P+ E EKTF YPLD+ L   ++++ V+FG  DGI VG
Sbjct: 1   MAIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVG 60

Query: 261 NVLLTVNGSPXNGKTTDDGREVXXILEIKXXYPLNLK 371
           + +L +NG   NG+ T DG+EV   L     YP++++
Sbjct: 61  HAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIR 97


>AF105025-1|AAF21897.1|  219|Homo sapiens unknown protein.
          Length = 219

 Score = 97.5 bits (232), Expect = 1e-19
 Identities = 43/97 (44%), Positives = 62/97 (63%)
 Frame = +3

Query: 81  MXIYGVYXXSKSGGLIYNYDHNIPKVETEKTFGYPLDIKLHHENKKIXVSFGXXDGINVG 260
           M I+ VY  +K+GGLIY  D   P+ E EKTF YPLD+ L   ++++ V+FG  DGI VG
Sbjct: 1   MAIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVG 60

Query: 261 NVLLTVNGSPXNGKTTDDGREVXXILEIKXXYPLNLK 371
           + +L +NG   NG+ T DG+EV   L     YP++++
Sbjct: 61  HAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIR 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,194,678
Number of Sequences: 237096
Number of extensions: 1050989
Number of successful extensions: 1303
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23293881950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)