Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_G05_e615_13.seq
(1602 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI000051A83E Cluster: PREDICTED: similar to CG8831-PA;... 123 2e-26
UniRef50_Q9V6B9 Cluster: Probable nucleoporin Nup54; n=5; Dipter... 111 4e-23
UniRef50_UPI0000E47599 Cluster: PREDICTED: similar to nucleopori... 104 8e-21
UniRef50_UPI0000D557BD Cluster: PREDICTED: similar to CG8831-PA;... 103 1e-20
UniRef50_A7S346 Cluster: Predicted protein; n=2; Nematostella ve... 102 3e-20
UniRef50_Q7Z3B4 Cluster: Nucleoporin p54; n=37; Euteleostomi|Rep... 96 2e-18
UniRef50_Q4SQB0 Cluster: Chromosome 4 SCAF14533, whole genome sh... 64 1e-08
UniRef50_Q9U3B9 Cluster: Putative uncharacterized protein npp-1;... 51 1e-04
UniRef50_Q4PC44 Cluster: Putative uncharacterized protein; n=1; ... 35 5.2
>UniRef50_UPI000051A83E Cluster: PREDICTED: similar to CG8831-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG8831-PA
- Apis mellifera
Length = 621
Score = 123 bits (296), Expect = 2e-26
Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Frame = +2
Query: 44 TRRHEGXDKDGHVAMLFNKSEQDIKNNXQAFITSLHSLLGNKPNLAVNIESIKAVSESKS 223
+R E + DG V + FNK ++D+K I+ ++++LGNKPNL + I++IK+ E KS
Sbjct: 296 SRMPEADNNDGLVVLCFNKKKKDVKEGEVQLISFMNNILGNKPNLTLTIDNIKSTGEDKS 355
Query: 224 QVVIYVVDKG--AXXTHISASELAAFLNXXXXXXXXXXXXXXXXXXXXXXXXXMLQXYLQ 397
QV I+V +KG I A+EL +L+ L+ YL
Sbjct: 356 QVTIFVTEKGITGAPRKIPANELVTYLSQPMQKQQLMQNGVEDILPLVKLDPAQLKEYLD 415
Query: 398 TPPXGMDMRLWXQAXADNXXPXNYIPVPIIGFSEIKFRAQCQ 523
PP +D+RLW QA DN P YIPVP+IGF ++K R +CQ
Sbjct: 416 NPPCSIDLRLWKQAQLDNPNPELYIPVPMIGFQQVKHRLKCQ 457
>UniRef50_Q9V6B9 Cluster: Probable nucleoporin Nup54; n=5;
Diptera|Rep: Probable nucleoporin Nup54 - Drosophila
melanogaster (Fruit fly)
Length = 610
Score = 111 bits (268), Expect = 4e-23
Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 5/171 (2%)
Frame = +2
Query: 26 RAAGIRTRRHEGXD-KDGHVAMLFNKSEQDIKNNXQAFITSLHSLLGNKPNLAVNIESIK 202
R I R G D K G VA+ F + +K + Q I +LHSL G+KPN+ V+I+SIK
Sbjct: 279 RFKAIGYSRMPGKDNKLGLVALNFCRELSAVKPHQQQVIQTLHSLFGSKPNMLVHIDSIK 338
Query: 203 AVSESKSQVVIYVVDKGAXXTH----ISASELAAFLNXXXXXXXXXXXXXXXXXXXXXXX 370
+ K Q+VIYV +K + I A+EL+ +LN
Sbjct: 339 ELENKKCQIVIYVEEKLQHAPNESKRILATELSNYLNQATLKPQLNNLGVVEALALVLPD 398
Query: 371 XXMLQXYLQTPPXGMDMRLWXQAXADNXXPXNYIPVPIIGFSEIKFRAQCQ 523
L+ YL+ PP G+D R+W QA +DN P YIPVP++GF+++K+R +CQ
Sbjct: 399 EDQLREYLENPPRGVDPRMWRQANSDNPDPTLYIPVPMVGFNDLKWRVKCQ 449
>UniRef50_UPI0000E47599 Cluster: PREDICTED: similar to nucleoporin
p54; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to nucleoporin p54 - Strongylocentrotus
purpuratus
Length = 536
Score = 104 bits (249), Expect = 8e-21
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Frame = +2
Query: 68 KDGHVAMLFNKSEQDIKNNXQAFITSLHSLLGNKPNLAVNIESIKAVSESKSQVVIYVVD 247
KDG V + FNK + +I++ Q + SL+ +LG+KP+L+V +E ++ + K++VV+Y+++
Sbjct: 223 KDGLVVLHFNKKDTEIRSQQQQMVDSLYRILGSKPSLSVCVEDVRPLPNDKAEVVVYILE 282
Query: 248 K---GAXXTHISASELAAFLNXXXXXXXXXXXXXXXXXXXXXXXXXMLQXYLQTPPXGMD 418
+ GA I ++E F N L+ YLQ PP G D
Sbjct: 283 RLPTGATK-RIPSTETFTFFNQASNKQQLGSLGVVHMQPRQALSQAQLEHYLQNPPLGYD 341
Query: 419 MRLWXQAXADNXXPXNYIPVPIIGFSEIKFRAQCQ 523
RLW QA DN P IPVP++GF IK R + Q
Sbjct: 342 PRLWRQAQLDNPDPDRLIPVPLVGFDVIKTRLEYQ 376
>UniRef50_UPI0000D557BD Cluster: PREDICTED: similar to CG8831-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8831-PA - Tribolium castaneum
Length = 642
Score = 103 bits (248), Expect = 1e-20
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 2/164 (1%)
Frame = +2
Query: 56 EGXDKDGHVAMLFNKSEQDIKNNXQAFITSLHSLLGNKPNLAVNIESIKAVSESKSQVVI 235
E + +G V ++FN+ ++ + Q I L +LGNKPNL V I+ IKA+S+++S++ I
Sbjct: 320 EHDNTEGIVKLIFNRKYAELSSQKQVLINGLSGILGNKPNLKVTIQHIKALSDTQSELRI 379
Query: 236 YVVDKGAXXT--HISASELAAFLNXXXXXXXXXXXXXXXXXXXXXXXXXMLQXYLQTPPX 409
V++KG I A++LA +LN L+ YL+T P
Sbjct: 380 VVMEKGVTGNSRKIPATDLANYLNQPTQKQQLTNVGVTAIIAYVTPSKAALEEYLKTVPQ 439
Query: 410 GMDMRLWXQAXADNXXPXNYIPVPIIGFSEIKFRAQCQAXQAXL 541
G D ++W A DN P Y+PVPI GFS++K R Q + L
Sbjct: 440 GFDPQMWRAAIMDNPNPSKYMPVPIYGFSDLKARKLKQEHETGL 483
>UniRef50_A7S346 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 567
Score = 102 bits (244), Expect = 3e-20
Identities = 55/154 (35%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Frame = +2
Query: 71 DGHVAMLFNKSEQDIKNNXQAFITSLHSLLGNKPNLAVNIESIKAVSESKSQVVIYVVDK 250
DG VA++ K E D++ Q F+T+LH G+KP + V ++ +K + E ++VVIYVV++
Sbjct: 253 DGLVAVVVKKKESDVRQQQQEFVTALHKCFGSKPTVMVCVDGLKPLPEDCTEVVIYVVER 312
Query: 251 ---GAXXTHISASELAAFLNXXXXXXXXXXXXXXXXXXXXXXXXXMLQXYLQTPPXGMDM 421
G H A+++ +LN +LQ YL P G+D
Sbjct: 313 AENGTTKIH-PATDVYNYLNQNNIKTQLQTIGVTSVTAKSSIPPALLQQYLDNAPAGIDS 371
Query: 422 RLWXQAXADNXXPXNYIPVPIIGFSEIKFRAQCQ 523
LW QA DN P +PVPIIGFSE+K R + Q
Sbjct: 372 LLWDQAKKDNPDPEKLLPVPIIGFSELKKRLKFQ 405
>UniRef50_Q7Z3B4 Cluster: Nucleoporin p54; n=37; Euteleostomi|Rep:
Nucleoporin p54 - Homo sapiens (Human)
Length = 507
Score = 96.3 bits (229), Expect = 2e-18
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Frame = +2
Query: 65 DKDGHVAMLFNKSEQDIKNNXQAFITSLHSLLGNKPNLAVNIESIKAVSESKSQVVIYVV 244
D+DG V ++FNK E +I++ Q + SLH +LG L VN+E K + + +++VVIYVV
Sbjct: 186 DEDGLVVLVFNKKETEIRSQQQQLVESLHKVLGGNQTLTVNVEGTKTLPDDQTEVVIYVV 245
Query: 245 DKGAXXT--HISASELAAFLNXXXXXXXXXXXXXXXXXXXXXXXXXMLQXYLQTPPXGMD 418
++ T + A+ L A ++ LQ PP G+D
Sbjct: 246 ERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVD 305
Query: 419 MRLWXQAXADNXXPXNYIPVPIIGFSEIKFRAQCQ 523
+W QA DN IPVP++GF E+ R + Q
Sbjct: 306 PIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQ 340
>UniRef50_Q4SQB0 Cluster: Chromosome 4 SCAF14533, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14533, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 518
Score = 64.1 bits (149), Expect = 1e-08
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +2
Query: 65 DKDGHVAMLFNKSEQDIKNNXQAFITSLHSLLGNKPNLAVNIESIKAVSESKSQVVIYVV 244
D+DG V ++ K E D++ Q + S+H +LGN LAVN++ +KA+ +++V+IY+V
Sbjct: 170 DEDGLVVLVLTKKEADVRAQQQQLVESIHKILGNNQTLAVNVDGVKALPNDQTEVIIYLV 229
Query: 245 DKGAXXT--HISASELAAFL 298
++ T I A+ L ++L
Sbjct: 230 ERSPNGTSKRIPATTLFSYL 249
Score = 43.6 bits (98), Expect = 0.015
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 410 GMDMRLWXQAXADNXXPXNYIPVPIIGFSEIKFRAQCQ 523
G+D +W QA DN P IPVP++GF E+ R Q Q
Sbjct: 314 GVDPIIWEQAKVDNPEPERLIPVPMVGFKELLHRLQIQ 351
>UniRef50_Q9U3B9 Cluster: Putative uncharacterized protein npp-1;
n=4; Caenorhabditis|Rep: Putative uncharacterized
protein npp-1 - Caenorhabditis elegans
Length = 639
Score = 50.8 bits (116), Expect = 1e-04
Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 6/180 (3%)
Frame = +2
Query: 20 YPRAAGIRTRR-HEGXDKDGHVAMLFNK--SEQDIKNNXQAFITSLHSLLGNKPNLAVNI 190
+ R GI R E D +G V ++ + + + + + ++LG PN+ V
Sbjct: 309 FERFVGIGYNRISERTDDEGFVTLVLRHPITNLNTEERRDKILEIIKAILGGGPNVEVRY 368
Query: 191 E---SIKAVSESKSQVVIYVVDKGAXXTHISASELAAFLNXXXXXXXXXXXXXXXXXXXX 361
S++ +S+ +++ I + G I +++
Sbjct: 369 APGTSMRTLSDGCTEICIIAKEGGFVAGAIKLAQILNDAPKMTQLESQLQVDKTRVLPKV 428
Query: 362 XXXXXMLQXYLQTPPXGMDMRLWXQAXADNXXPXNYIPVPIIGFSEIKFRAQCQAXQAXL 541
YL+T P G+D R+W QA +N P +PVP+ G+ ++ R + Q ++ L
Sbjct: 429 GMSKAQRDRYLETVPDGIDERIWRQAIKENPAPNKLLPVPVRGWEALRDRQKAQVGESKL 488
>UniRef50_Q4PC44 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 992
Score = 35.1 bits (77), Expect = 5.2
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 413 MDMRLWXQAXADNXXPXNYIPVPIIGFSEIKFRAQCQAXQA 535
M +LW A +N P PV +GFS++K R + QA +A
Sbjct: 266 MHDQLWAAAIRENPDPNRLYPVLALGFSDLKKRIESQAREA 306
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,997,607
Number of Sequences: 1657284
Number of extensions: 9543700
Number of successful extensions: 18796
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18789
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 173006894775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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