Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_G04_e607_14.seq
         (1550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   2.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   6.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   8.0  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
            neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = +2

Query: 1118 PKEXXLTXREXXXPKXEKKXXPXPXXRPXPNPPP 1219
            P +  +   +   P   +K    P   P P+PPP
Sbjct: 72   PPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPP 105


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 472 WGKYTRA*LRNNCFFLDDC 528
           W +YT + + N C FL +C
Sbjct: 130 WHRYTLSFIENYCQFLYNC 148


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 155 ILF*EVVIANNIDFYQSDNSMKRKRQPSCRI 63
           I F + +  NNI+ Y+   + KRK    C I
Sbjct: 197 ITFDDAINNNNIELYKEIFNGKRKNPNGCDI 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,993
Number of Sequences: 336
Number of extensions: 4997
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46705800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)