Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_G04_e607_14.seq
         (1550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071155-1|AAL48777.1|  100|Drosophila melanogaster RE18615p pro...    67   5e-11
AJ249754-1|CAB56698.1|  100|Drosophila melanogaster sec61beta pr...    67   5e-11
AE013599-1924|AAF58229.1|  100|Drosophila melanogaster CG10130-P...    67   5e-11
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    30   7.5  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    30   7.5  

>AY071155-1|AAL48777.1|  100|Drosophila melanogaster RE18615p
           protein.
          Length = 100

 Score = 67.3 bits (157), Expect = 5e-11
 Identities = 39/80 (48%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
 Frame = +1

Query: 265 SAPRTAS---GSTVRQRKXXXXXXXXXXXXXXXXXXX-MWRFYTDDSXXXXXXXXXXXXM 432
           SAPR+A    GST++QRK                    MWRFYTDDS            M
Sbjct: 21  SAPRSAGSGGGSTLKQRKTTTSTTAARSRAPGGAGTGGMWRFYTDDSPGIKVGPVPVLVM 80

Query: 433 SLLFIASVFMLHIWGKYTRA 492
           SLLFIASVFMLHIWGKY R+
Sbjct: 81  SLLFIASVFMLHIWGKYNRS 100


>AJ249754-1|CAB56698.1|  100|Drosophila melanogaster sec61beta
           protein protein.
          Length = 100

 Score = 67.3 bits (157), Expect = 5e-11
 Identities = 39/80 (48%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
 Frame = +1

Query: 265 SAPRTAS---GSTVRQRKXXXXXXXXXXXXXXXXXXX-MWRFYTDDSXXXXXXXXXXXXM 432
           SAPR+A    GST++QRK                    MWRFYTDDS            M
Sbjct: 21  SAPRSAGSGGGSTLKQRKTTTSTTAARSRAPGGAGTGGMWRFYTDDSPGIKVGPVPVLVM 80

Query: 433 SLLFIASVFMLHIWGKYTRA 492
           SLLFIASVFMLHIWGKY R+
Sbjct: 81  SLLFIASVFMLHIWGKYNRS 100


>AE013599-1924|AAF58229.1|  100|Drosophila melanogaster CG10130-PA
           protein.
          Length = 100

 Score = 67.3 bits (157), Expect = 5e-11
 Identities = 39/80 (48%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
 Frame = +1

Query: 265 SAPRTAS---GSTVRQRKXXXXXXXXXXXXXXXXXXX-MWRFYTDDSXXXXXXXXXXXXM 432
           SAPR+A    GST++QRK                    MWRFYTDDS            M
Sbjct: 21  SAPRSAGSGGGSTLKQRKTTTSTTAARSRAPGGAGTGGMWRFYTDDSPGIKVGPVPVLVM 80

Query: 433 SLLFIASVFMLHIWGKYTRA 492
           SLLFIASVFMLHIWGKY R+
Sbjct: 81  SLLFIASVFMLHIWGKYNRS 100


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
 Frame = +2

Query: 1109 PNGPKEXXLTXREXXXPKXEKKXXPXPXXRPXPNPPPXXP---PGXG 1240
            P+ PK      R    P    +  P P   P P PPP  P   PG G
Sbjct: 194  PDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYG 240



 Score = 30.3 bits (65), Expect = 7.5
 Identities = 37/143 (25%), Positives = 41/143 (28%)
 Frame = +1

Query: 1033 PXPXRKPXXXQGPTXXPXXFGXGPKXXWT*GXPINXSGXPXSKXGKKXXPXAGXKALPQP 1212
            P P  +P    GP   P      PK   T G      G P    G      A     PQP
Sbjct: 212  PPPRPQPTPGYGPPPPPPP----PKPQPTPGY-----GPPTPPPGPGPAQPAPQPPRPQP 262

Query: 1213 PPXXXPWPXXXXEXXPXCFXLXXPXXPXRXXGXATSPSFXFPXXPRXXXWAXPXXXXXPX 1392
            P    P P    E  P          P +    A  P +  P  P     A P     P 
Sbjct: 263  PRPQPPRPQPGSEYLPP--PGENEVTPTQPQPTAPVPEYG-PPPPAPP--AGPTYQPRPP 317

Query: 1393 XPXLXSPXXXXAPIXXXPPVPXP 1461
             P   +P     P    PP P P
Sbjct: 318  APPAPAPGPTYQPRPPAPPAPAP 340


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
            protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
 Frame = +2

Query: 1109 PNGPKEXXLTXREXXXPKXEKKXXPXPXXRPXPNPPPXXP---PGXG 1240
            P+ PK      R    P    +  P P   P P PPP  P   PG G
Sbjct: 194  PDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYG 240



 Score = 30.3 bits (65), Expect = 7.5
 Identities = 37/143 (25%), Positives = 41/143 (28%)
 Frame = +1

Query: 1033 PXPXRKPXXXQGPTXXPXXFGXGPKXXWT*GXPINXSGXPXSKXGKKXXPXAGXKALPQP 1212
            P P  +P    GP   P      PK   T G      G P    G      A     PQP
Sbjct: 212  PPPRPQPTPGYGPPPPPPP----PKPQPTPGY-----GPPTPPPGPGPAQPAPQPPRPQP 262

Query: 1213 PPXXXPWPXXXXEXXPXCFXLXXPXXPXRXXGXATSPSFXFPXXPRXXXWAXPXXXXXPX 1392
            P    P P    E  P          P +    A  P +  P  P     A P     P 
Sbjct: 263  PRPQPPRPQPGSEYLPP--PGENEVTPTQPQPTAPVPEYG-PPPPAPP--AGPTYQPRPP 317

Query: 1393 XPXLXSPXXXXAPIXXXPPVPXP 1461
             P   +P     P    PP P P
Sbjct: 318  APPAPAPGPTYQPRPPAPPAPAP 340


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,276,862
Number of Sequences: 53049
Number of extensions: 910689
Number of successful extensions: 2902
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2587
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8696983968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)