Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_G03_e599_13.seq
         (1545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   6.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   8.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   8.0  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 173 ELEERRLSSPRKKELEKRGLSNLRKGERTIIK 268
           +LE+  L   R + LE+R   NL+  +R  +K
Sbjct: 117 QLEQIHLDDNRIESLERRAFMNLKSLKRLNLK 148


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 439 LLFSAITVIFFDGCHLSSTGLIVLFF 362
           +LFS I VI  +     STGL+V+ F
Sbjct: 148 ILFSEILVIVSEQEWSFSTGLLVMIF 173


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 439 LLFSAITVIFFDGCHLSSTGLIVLFF 362
           +LFS I VI  +     STGL+V+ F
Sbjct: 166 ILFSEILVIVSEQEWSFSTGLLVMIF 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,362
Number of Sequences: 336
Number of extensions: 4011
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46500950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)