Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_G03_e599_13.seq
(1545 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861 37 0.037
01_03_0255 - 14281004-14281066,14281114-14281203,14281672-142817... 33 0.61
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 31 1.8
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 2.4
08_02_1325 - 26146775-26147247,26147397-26148579 29 9.9
>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
Length = 158
Score = 37.1 bits (82), Expect = 0.037
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Frame = +1
Query: 103 ASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEKRT-----IKPAERRKDYHQ 267
A ++ R ++A K + AGR+K + A GAG+++ + A RRK+ +
Sbjct: 4 AGRRRRRRRGGGRRAAGRRKEEEEAGRRKAGEEARRGAGKRKRRRGGGRRAAGRRKEEEE 63
Query: 268 ACGRRSCGRKRNQACGRNWKKE--DYQACGR*AEKRGLSSLWKIDDNRRR 411
A GRR G + + G+ ++ +A GR E+ ++ RRR
Sbjct: 64 A-GRRKAGEEARRGAGKRKRRRGGGRRAAGRRKEEEEAGRRKAGEETRRR 112
>01_03_0255 -
14281004-14281066,14281114-14281203,14281672-14281737,
14281837-14281907,14282021-14282153,14282245-14283898,
14285346-14285935
Length = 888
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/102 (26%), Positives = 44/102 (43%)
Frame = +2
Query: 155 KKNTTKELEERRLSSPRKKELEKRGLSNLRKGERTIIKHAEEGAVEERGIKLAEGTGRKR 334
KK KE E+R+L R++ELE R +R+ E K E+ ++ A R+R
Sbjct: 524 KKQREKEEEQRKLERDREEELE-REREMMRRREHEERKRREKEREARHIVEKAMREARER 582
Query: 335 TIKPAEDELKKEDYQACGR*MTTVEEDDCNRRKKKTTSLEER 460
A + ++E Q R V++ R++ ER
Sbjct: 583 AAAEARMQAEREARQRAER--AAVQKAAAEARERAAAEARER 622
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 31.5 bits (68), Expect = 1.8
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1624 SPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1683
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1684 SPTSPS 1689
Score = 31.5 bits (68), Expect = 1.8
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1638 SPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1697
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1698 SPTSPS 1703
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAY 1662
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1663 SPTSPS 1668
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P SP+ + P P P P P
Sbjct: 1575 SPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1634
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1635 SPTSPS 1640
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1610 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSY 1669
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1670 SPTSPS 1675
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1617 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSY 1676
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1677 SPTSPS 1682
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1631 SPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1690
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1691 SPTSPS 1696
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1666 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 1725
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1726 SPTSPS 1731
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1680 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNY 1739
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1740 SPTSPS 1745
Score = 29.9 bits (64), Expect = 5.6
Identities = 15/66 (22%), Positives = 23/66 (34%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SP++ SP Y P+ SP+ + P P P P P +
Sbjct: 1589 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVY 1648
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1649 SPTSPA 1654
Score = 29.9 bits (64), Expect = 5.6
Identities = 16/66 (24%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1596 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAY 1655
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1656 SPTSPA 1661
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/66 (24%), Positives = 21/66 (31%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ +P + P P P P P
Sbjct: 1568 SPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1627
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1628 SPTSPS 1633
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/66 (24%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1673 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSY 1732
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1733 SPTSPN 1738
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/65 (24%), Positives = 21/65 (32%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1582 SPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1641
Query: 1508 SSXTP 1522
S +P
Sbjct: 1642 SPTSP 1646
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1742 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSY 1801
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1802 SPSSPS 1807
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/72 (25%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPX--PLPPRXXXPPXLL 1501
SP + SP Y P+ SP+ + P P P P P P
Sbjct: 1652 SPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSP 1711
Query: 1502 LXSSXTPSLXXS 1537
S +PS S
Sbjct: 1712 SYSPTSPSYSYS 1723
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPP 1492
SPS+ SP Y P+ S SP+ + P P P P P
Sbjct: 1763 SPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1817
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPP 1492
SPS+ SP Y PS +PS + SS P P P P
Sbjct: 1798 SPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSP 1852
>08_02_1325 - 26146775-26147247,26147397-26148579
Length = 551
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 KYYQGAGR-KKTIKPAEEGAGEKRTIKPAERRKDYHQACGRR 282
+++QG + KK K ++E G +R K ++RRKD H +R
Sbjct: 10 RFFQGKHKEKKHKKESKERRGRERKEKNSDRRKDKHSKKHKR 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,849,348
Number of Sequences: 37544
Number of extensions: 516373
Number of successful extensions: 1751
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1729
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4977304332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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