Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_G03_e599_13.seq
(1545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 35 0.18
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 35 0.18
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 34 0.23
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 31 1.7
AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical... 31 2.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 2.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 2.9
AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical ... 31 2.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 3.8
AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical ... 30 3.8
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 30 5.0
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 29 6.7
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 6.7
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 29 6.7
AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical ... 29 6.7
AC024790-5|AAF60640.2| 119|Caenorhabditis elegans Hypothetical ... 29 6.7
AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical ... 29 6.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 6.7
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 34.7 bits (76), Expect = 0.18
Identities = 20/66 (30%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y PS SPS S P P P P P
Sbjct: 1644 SPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1703
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1704 SPTSPS 1709
Score = 32.3 bits (70), Expect = 0.95
Identities = 18/66 (27%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SPS S P P P P P
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTY 1696
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1697 SPTSPT 1702
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ S P P P P P
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTY 1689
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1690 SPTSPT 1695
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/66 (24%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRY 1675
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1676 SPTSPT 1681
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/66 (24%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1623 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTY 1682
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1683 SPTSPT 1688
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/65 (24%), Positives = 21/65 (32%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSY 1668
Query: 1508 SSXTP 1522
S +P
Sbjct: 1669 SPSSP 1673
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 34.7 bits (76), Expect = 0.18
Identities = 20/66 (30%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y PS SPS S P P P P P
Sbjct: 1651 SPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1710
Query: 1508 SSXTPS 1525
S +PS
Sbjct: 1711 SPTSPS 1716
Score = 32.3 bits (70), Expect = 0.95
Identities = 18/66 (27%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SPS S P P P P P
Sbjct: 1644 SPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTY 1703
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1704 SPTSPT 1709
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ S P P P P P
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTY 1696
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1697 SPTSPT 1702
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/66 (24%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1623 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRY 1682
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1683 SPTSPT 1688
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/66 (24%), Positives = 22/66 (33%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTY 1689
Query: 1508 SSXTPS 1525
S +P+
Sbjct: 1690 SPTSPT 1695
Score = 29.5 bits (63), Expect = 6.7
Identities = 16/65 (24%), Positives = 21/65 (32%)
Frame = +2
Query: 1328 SPSFXXXSPFYXPSFSXXSPSXXFXXSSXPXXXXXXIXXXPXXPXPLPPRXXXPPXLLLX 1507
SPS+ SP Y P+ SP+ + P P P P P
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSY 1675
Query: 1508 SSXTP 1522
S +P
Sbjct: 1676 SPSSP 1680
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 34.3 bits (75), Expect = 0.23
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +2
Query: 149 VAKKNTTKELEERRLSSPRKKELEKRGLSNLRKGERT--IIKHAEEGAVEERGIKLAEGT 322
V K K+ E+R++ +KE E+ E+ I K E+G E+ KL++
Sbjct: 172 VEKLKEQKKAEKRKMKEALEKEEEEESFDEDEVSEKRAKIEKSTEKGGSEKATTKLSKKD 231
Query: 323 GRKRTIKPAE-DELKKEDYQACGR*MTTVEEDDCNRRKKKTTSLEERRYDGVLAK 484
RK T+K + DE K+ +A +E + N +++++ ++AK
Sbjct: 232 RRKETLKARKSDEQKRRAGEALINSREIIEFGERNDAPPTFGGALKKKFEPLMAK 286
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.7
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +2
Query: 146 HVAKKNTTKELEERRLSSPRKKE--LEKRGLSNLRKGERTIIKHAEEGAVEERGIKLAEG 319
+V K + K+ E ++ P+K+E EK S + ++ K ++ E++ K +
Sbjct: 51 NVKSKKSEKKEEPKKEEEPKKEEEKKEKSKKSEKKDDKKEEAKKEDDKKDEKKDEKKEDK 110
Query: 320 TGRKRTIKPAED-ELKKEDYQACGR*MTTVEEDDCNRRKKKTTSLEERR 463
K+ K E E KKED + G E+DD K EE++
Sbjct: 111 KDDKKDDKKEEKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKK 159
>AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical
protein Y47D7A.11 protein.
Length = 129
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 827 PFSESXYQFHXPAXFTPPWTGNTPAVYPPXXXXPXXPXFSAWXNXXXXPPP 979
P +E+ Y P+ TPP + TP YP P P ++ + PPP
Sbjct: 20 PVAENSYPT-TPSYPTPPPSYPTPKKYPVAPTYPSPPAYAQKPSYSAPPPP 69
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 103 ASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEK-RTIKPAERRKDYHQ 267
AS +E+S T K +K + + KKT+KP +E G+ KP E +KD Q
Sbjct: 12640 ASTEEKSTTEKPTN----DKTSKKSAEKKTVKPKKEVTGKPLEAKKPVEDKKDASQ 12691
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 103 ASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEK-RTIKPAERRKDYHQ 267
AS +E+S T K +K + + KKT+KP +E G+ KP E +KD Q
Sbjct: 12640 ASTEEKSTTEKPTN----DKTSKKSAEKKTVKPKKEVTGKPLEAKKPVEDKKDASQ 12691
>AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical
protein T11F8.4 protein.
Length = 535
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/88 (21%), Positives = 40/88 (45%)
Frame = +1
Query: 58 GQMIVLLQFLVKSTGASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEKRTIK 237
G ++ F + +E+ L K+ +E + + RKK + ++G+ ++
Sbjct: 365 GSVVAASDFPTADEVETVEEKDLKKKQDAKNQESDKRKNSDRKKKSERKKKGSKGDMILE 424
Query: 238 PAERRKDYHQACGRRSCGRKRNQACGRN 321
++ KD H+ GRR R+ N G++
Sbjct: 425 KSKETKD-HRESGRRLTDREANAVGGKS 451
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 3.8
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 155 KKNTTKELEERRLSSPRKKELEKRGLSNLRKGERTIIKHAEEGAVEERGIKLAEGTGRKR 334
KK K+ EE++ +K+E EK+ ++ E+ + +E VEE+ K+ E ++
Sbjct: 317 KKEEEKKEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEVEEKSEKVEE---KEL 373
Query: 335 TIKPAEDELKK 367
K E+E KK
Sbjct: 374 EPKKDEEETKK 384
>AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical
protein Y18H1A.2 protein.
Length = 270
Score = 30.3 bits (65), Expect = 3.8
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +2
Query: 170 KELEERRLSSPRKKELEKRGLSNLRKGERTIIK-HAEEGAVEERGIKLAEGTGRKRTIKP 346
KELEE R + E++ +K ++ K H + EER ++ R++ +
Sbjct: 153 KELEEERKRKREDSDSEEKAKKRHKKDKKKKKKKHRHRDSSEERQLEEEYDRERRQKLAS 212
Query: 347 AEDE-LKKEDYQ-ACGR*MTTVEEDDCNRRKKKTTSLEERR 463
DE LK+E + A + EE + +++K EE+R
Sbjct: 213 MRDERLKRERVEKARAHALLHPEEIELLQKRKAAEDSEEKR 253
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 155 KKNTTKELEERRLSSPRKKELEKRGLSNLRKGERTIIKHAEEGAVEERGIKLAEGTGRKR 334
KK +K+ E ++ +K+ EK+ +K E+ K ++ E++ K E K+
Sbjct: 71 KKEKSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKK 130
Query: 335 TIKPAEDELKKED 373
+ EDE +K+D
Sbjct: 131 SEDKKEDEKEKDD 143
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 29.5 bits (63), Expect = 6.7
Identities = 23/100 (23%), Positives = 47/100 (47%)
Frame = +1
Query: 109 KKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEKRTIKPAERRKDYHQACGRRSC 288
KK+ S+KK+ +++ + +K K E+ GEK++ K E++ D +
Sbjct: 70 KKDGDKKSEKKEGDEKKEEKKDEDKKDEKKDEEKKDGEKKSEKKDEKKDDKKD---DKKD 126
Query: 289 GRKRNQACGRNWKKEDYQACGR*AEKRGLSSLWKIDDNRR 408
G+K ++ K E+ + + +K+G K DD ++
Sbjct: 127 GKKEDEKKDDEKKDEEKKDDKKEDDKKGDKKDEKKDDEKK 166
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 6.7
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 146 HVAKKNTTKELEERRLSSPRKKELEKRGLSNLRKGERTIIKHAE---EGAVEERGIKLAE 316
H ++ LE+ S ++E+EK+ R+ E I+ E + A E R + E
Sbjct: 423 HEMPEDRETALEKLNRSLHNRREMEKQKAEEARRKEAERIEEIERMRQQAEERRRREREE 482
Query: 317 GTGRKRTIKPAEDELKKED 373
RKR + AE + K+E+
Sbjct: 483 EERRKREEEEAEKQRKREE 501
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/73 (26%), Positives = 39/73 (53%)
Frame = +2
Query: 155 KKNTTKELEERRLSSPRKKELEKRGLSNLRKGERTIIKHAEEGAVEERGIKLAEGTGRKR 334
KK+ K+ +E++ + +K E +K + +K E+ K E+ ++ K ++ K+
Sbjct: 110 KKDEDKK-DEKKDADEKKDEEKKDDKKDEKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKK 168
Query: 335 TIKPAEDELKKED 373
+ + +DE KKED
Sbjct: 169 SKREKKDEEKKED 181
>AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical
protein Y40B1B.7 protein.
Length = 123
Score = 29.5 bits (63), Expect = 6.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 170 KELEERRLSSPRKKELEKRGLSNLRKGE 253
K+++ER+ RK E EKR L N RK E
Sbjct: 64 KQVQERQEKKERKVEQEKRRLENERKAE 91
>AC024790-5|AAF60640.2| 119|Caenorhabditis elegans Hypothetical
protein Y47D7A.2 protein.
Length = 119
Score = 29.5 bits (63), Expect = 6.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 827 PFSESXYQFHXPAXFTPPWTGNTPAVYPPXXXXPXXPXFSA 949
P +E+ Y P+ TPP + TP YP P P +SA
Sbjct: 20 PVAENSYPT-TPSYPTPPPSYPTPKKYPVAPTYPSTPSYSA 59
>AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical
protein Y47D7A.7 protein.
Length = 121
Score = 29.5 bits (63), Expect = 6.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 827 PFSESXYQFHXPAXFTPPWTGNTPAVYPPXXXXPXXPXFSA 949
P +E+ Y P+ TPP + TP YP P P +SA
Sbjct: 20 PVAENSYPT-TPSYPTPPPSYPTPKKYPVAPTYPSTPSYSA 59
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 6.7
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 146 HVAKKNTTKELEERRLSSPRKKELEKRGLSNLRKGERTIIKHAE---EGAVEERGIKLAE 316
H ++ LE+ S ++E+EK+ R+ E I+ E + A E R + E
Sbjct: 423 HEMPEDRETALEKLNRSLHNRREMEKQKAEEARRKEAERIEEIERMRQQAEERRRREREE 482
Query: 317 GTGRKRTIKPAEDELKKED 373
RKR + AE + K+E+
Sbjct: 483 EERRKREEEEAEKQRKREE 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,142,288
Number of Sequences: 27780
Number of extensions: 413707
Number of successful extensions: 1729
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1690
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4452547242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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