Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_G01_e583_13.seq
         (1474 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           48   9e-07
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       26   2.4  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 47.6 bits (108), Expect = 9e-07
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = +2

Query: 155 LPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAA--VNEDEDNSSS 292
           LP GW+ R +++ G TYY+N YTK +QW +P  PA   V +  +N+++
Sbjct: 163 LPRGWEERSAQN-GRTYYVNHYTKTTQWSRPTEPAGPPVRQSGNNNAA 209



 Score = 27.9 bits (59), Expect = 0.79
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 155 LPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 247
           LP GW+ RK+ S G  Y+++   + +Q+  P
Sbjct: 376 LPHGWEQRKTAS-GRVYFVDHNNRTTQFTDP 405



 Score = 26.2 bits (55), Expect = 2.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 149 DSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSP 256
           D+L  G    ++   G  Y+ +  TKQS W  P  P
Sbjct: 325 DALVNGNAEIRTTQQGQVYFYHIPTKQSTWHDPRIP 360


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = -1

Query: 658 VILRMEIIGPLGGTQNDMYARLSFNQLAQLTNLQCKSDVFERLLHLSLLETAQITIAFS 482
           V+LR E I  LG   +DM +R S  QL  +T+   +  +F+ L   ++     ITI  S
Sbjct: 198 VLLRHENI--LGYVGSDMTSRNSCTQLWLITHYYPQGSLFDYLNRTAISTHQMITICLS 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,115,233
Number of Sequences: 2352
Number of extensions: 20569
Number of successful extensions: 32
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 171905085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)