Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_G01_e583_13.seq
(1474 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical... 145 6e-35
AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical... 40 0.004
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 40 0.006
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 40 0.006
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 35 0.17
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 35 0.17
AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical ... 35 0.17
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 33 0.68
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 33 0.68
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 31 1.6
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z72509-1|CAA96645.1| 339|Caenorhabditis elegans Hypothetical pr... 31 2.1
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 2.1
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 31 2.7
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 31 2.7
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 30 4.8
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 30 4.8
>AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A2AL.13 protein.
Length = 168
Score = 145 bits (352), Expect = 6e-35
Identities = 78/168 (46%), Positives = 102/168 (60%), Gaps = 10/168 (5%)
Frame = +2
Query: 146 EDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAAVNEDEDNSSSKEVQCSHILVK 325
++SLP GW+ R+SRS YY N T +SQWE+P A S K VQC H+LVK
Sbjct: 3 DNSLPAGWEKRQSRSNDRVYYFNTATGRSQWERPDESAFGK----GSELKSVQCLHLLVK 58
Query: 326 HKXXXXXXXXXXXXITRTKEEAIQIIKG-------YRTEIV---NREVGFDEVARLYSDC 475
H ITR+K++AI I+K Y E+ N E F E+A+ +SDC
Sbjct: 59 HDGSRNPSSWRSDHITRSKDDAINILKSADLRNFHYEKELKDASNIEGKFRELAKQFSDC 118
Query: 476 SSAKRDGDLGRFKKGQMQKPFEDVAFTLKIGQLSQLVETQSGVHIILR 619
SSAKR GDLG F++ QMQKPFED +F L+IG++S +V+T SGVH+I R
Sbjct: 119 SSAKRGGDLGPFERRQMQKPFEDASFALEIGEMSDIVDTSSGVHLIYR 166
>AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical
protein Y48C3A.16 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.004
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = +2
Query: 443 FDEVARLYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFTLKIGQLSQ------LVETQSGV 604
F+EVA YS+ A+ GDLG +G M PF+D AF L + V+T+ G
Sbjct: 59 FNEVAAQYSE-DKARSGGDLGWMTRGSMVGPFQDAAFALSNSSCDKPIYTDPPVKTKFGY 117
Query: 605 HIIL 616
H+I+
Sbjct: 118 HVIM 121
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 39.5 bits (88), Expect = 0.006
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 134 AAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGS 253
AA E+ LP+GW+ R + G YY++ TK + WE+P +
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERPST 252
Score = 38.7 bits (86), Expect = 0.010
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 155 LPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 247
LPEGW+ R+ +T Y++N + +QWE P
Sbjct: 326 LPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 32.7 bits (71), Expect = 0.68
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 155 LPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 247
LP+GW+ R+ G YY++ T+ + W++P
Sbjct: 255 LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 39.5 bits (88), Expect = 0.006
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 134 AAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGS 253
AA E+ LP+GW+ R + G YY++ TK + WE+P +
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERPST 252
Score = 39.1 bits (87), Expect = 0.008
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 155 LPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAAVNEDE 277
LPEGW+ R+ +T Y++N + +QWE P + D+
Sbjct: 326 LPEGWEKRQDPNTSRMYFVNHVNRTTQWEDPRTQGFRGSDQ 366
Score = 32.7 bits (71), Expect = 0.68
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 155 LPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 247
LP+GW+ R+ G YY++ T+ + W++P
Sbjct: 255 LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 34.7 bits (76), Expect = 0.17
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 119 RKSEMAAAQEDSLPEG---WQARKSRSTGMTYYLNKYTKQSQWEKP 247
R +E A ++++L + W KS + G TYY NK TK++QW P
Sbjct: 1333 RANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1377
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 34.7 bits (76), Expect = 0.17
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 119 RKSEMAAAQEDSLPEG---WQARKSRSTGMTYYLNKYTKQSQWEKP 247
R +E A ++++L + W KS + G TYY NK TK++QW P
Sbjct: 1347 RANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1391
>AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical
protein Y40B1A.2 protein.
Length = 120
Score = 34.7 bits (76), Expect = 0.17
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 164 GWQARKSRSTGMTYYLNKYTKQSQWEKP 247
GW + S S+G YY NK T+ SQW+KP
Sbjct: 10 GWTEQMS-SSGKMYYYNKKTEISQWDKP 36
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 32.7 bits (71), Expect = 0.68
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2
Query: 266 NEDEDNSSSKEVQCSHILVKHKXXXXXXXXXXXXITRTKEEAIQIIKGYRTEIVNREVGF 445
+E E KE + + H+ T+ KEEA++I K ++I + E+
Sbjct: 1583 SEIEKRIQEKEEEFENTRRNHQRALESMQATLEAETKQKEEALRIKKKLESDINDLEIAL 1642
Query: 446 DEVARLYSD 472
D R Y+D
Sbjct: 1643 DHANRAYAD 1651
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 32.7 bits (71), Expect = 0.68
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2
Query: 266 NEDEDNSSSKEVQCSHILVKHKXXXXXXXXXXXXITRTKEEAIQIIKGYRTEIVNREVGF 445
+E E KE + + H+ T+ KEEA++I K ++I + E+
Sbjct: 1583 SEIEKRIQEKEEEFENTRRNHQRALESMQATLEAETKQKEEALRIKKKLESDINDLEIAL 1642
Query: 446 DEVARLYSD 472
D R Y+D
Sbjct: 1643 DHANRAYAD 1651
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 110 NDPRKSEMAAAQEDS-LPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAAVNED 274
N P S Q S +P+GW+ R+ G T Y+N + +Q+ P S + N D
Sbjct: 153 NSPSDSTADLQQTSSGMPQGWEERED-GNGRTVYVNHALRTTQFTPPESVSNGNVD 207
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 125 SEMAAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 247
SE Q +LP WQ S+S + YY+ + ++++QWE P
Sbjct: 3041 SEHFLNQSVTLP--WQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 125 SEMAAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 247
SE Q +LP WQ S+S + YY+ + ++++QWE P
Sbjct: 3041 SEHFLNQSVTLP--WQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z72509-1|CAA96645.1| 339|Caenorhabditis elegans Hypothetical
protein F32G8.1 protein.
Length = 339
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 579 SWLKLSLAYISFCVPPKGPIISILNITFSLFNITYINFQCSSKELCR-DVAICID*LSPR 755
SWL +L IS VPP I+ I I L ++ ++ ++ + + D+A+ I L P
Sbjct: 197 SWLATNLNMISIFVPPIMSIVFIRLIQIKLNSLKHLFTDKTAAQAKKFDLALTIQTLVPA 256
Query: 756 GCTRVSYFLHRI 791
C Y H I
Sbjct: 257 VCVIPIYIAHLI 268
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 125 SEMAAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 247
SE Q +LP WQ S+S + YY+ + ++++QWE P
Sbjct: 3041 SEHFLNQSVTLP--WQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 30.7 bits (66), Expect = 2.7
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +2
Query: 119 RKSEMAAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAAVNEDEDNSSSKE 298
R+ M Q P+ + G YY N T+++ WEKP A ++++ +S E
Sbjct: 218 REERMPHGQIPQNPDDAWNEFNAPDGRKYYFNSITQENTWEKP--KALIDQENGGGASPE 275
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 30.7 bits (66), Expect = 2.7
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +2
Query: 119 RKSEMAAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAAVNEDEDNSSSKE 298
R+ M Q P+ + G YY N T+++ WEKP A ++++ +S E
Sbjct: 209 REERMPHGQIPQNPDDAWNEFNAPDGRKYYFNSITQENTWEKP--KALIDQENGGGASPE 266
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 194 GMTYYLNKYTKQSQWEKPGSPAAVNEDEDNSSSKE 298
G YY N T+++ WEKP A ++++ +S E
Sbjct: 22 GRKYYFNSITQENTWEKP--KALIDQENGGGASPE 54
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 194 GMTYYLNKYTKQSQWEKPGSPAAVNEDEDNSSSKE 298
G YY N T+++ WEKP A ++++ +S E
Sbjct: 22 GRKYYFNSITQENTWEKP--KALIDQENGGGASPE 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,963,570
Number of Sequences: 27780
Number of extensions: 478820
Number of successful extensions: 990
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4225111268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -