Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_F11_e662_11.seq
(1584 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 164 3e-41
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 160 6e-40
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 113 6e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 64 7e-11
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 36 0.020
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.19
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 32 0.19
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 31 0.33
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 30 1.0
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 1.3
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 29 1.8
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 3.1
SPBC25H2.08c |mrs2||magnesium ion transporter Mrs2|Schizosacchar... 28 4.1
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 28 4.1
SPBC19F8.02 |||nuclear distribution protein NUDC |Schizosaccharo... 27 5.4
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 7.1
SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces po... 27 9.4
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 9.4
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 9.4
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 27 9.4
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 9.4
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 164 bits (398), Expect = 3e-41
Identities = 79/138 (57%), Positives = 101/138 (73%)
Frame = -2
Query: 704 VTFDIGR*REFLTVSAIEKSTXKENKITITXXKGRLSKEEIERMVNEAEKYRTEDEKQKD 525
VTFD+ L VSA+EK T K KITIT KGRLSKEEI+RMV+EAEKY+ EDE +
Sbjct: 474 VTFDVDA-NGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETS 532
Query: 524 TIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLADKEEYEH 345
IQ+KN LESY ++++++++D LKDK+ SDK+ I +TI+WLD N A K+EYE
Sbjct: 533 RIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYED 592
Query: 344 KQKELEGVCNPIITKLYQ 291
KQKELEGV NPI+ K+YQ
Sbjct: 593 KQKELEGVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 160 bits (388), Expect = 6e-40
Identities = 77/138 (55%), Positives = 100/138 (72%)
Frame = -2
Query: 704 VTFDIGR*REFLTVSAIEKSTXKENKITITXXKGRLSKEEIERMVNEAEKYRTEDEKQKD 525
VTFD+ L VSA+EK T K KITIT KGRLSKEEI+RMV EAEKY+ EDE +
Sbjct: 474 VTFDVDA-NGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESG 532
Query: 524 TIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLADKEEYEH 345
IQ+KN LESY ++++++++D LKDK+ SDK+ + +TI+WLDSN A K+E+E
Sbjct: 533 RIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEA 592
Query: 344 KQKELEGVCNPIITKLYQ 291
KQKELE V NPI+ K+YQ
Sbjct: 593 KQKELESVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 113 bits (272), Expect = 6e-26
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Frame = -2
Query: 704 VTFDIGR*REFLTVSAIEKS-TXKENKITITXXKGRLSKEEIERMVNEAEKYRTEDEKQK 528
VTF++ LTVSA++KS K K+ I KGRLS+E+IERMV EAE++ ED+ K
Sbjct: 503 VTFEVDA-NGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILK 561
Query: 527 DTIQSKNALESYCFNMKSTM-EDEKLKDKITDSDKQIIMDKCNDTIKWLD-SNQLADKEE 354
+ I+++N LE+Y +++K +DE+L K+ DKQ ++D D +WL+ + A KEE
Sbjct: 562 ERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEE 621
Query: 353 YEHKQKELEGVCNPIITKLY 294
+E ++++L+ V +PI KLY
Sbjct: 622 FEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 63.7 bits (148), Expect = 7e-11
Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Frame = -2
Query: 704 VTFDIGR*REFLTVSAIEKSTXKENKITITXXKGRLSKEEIERMVNEAEKYRTEDEKQKD 525
V+FD+ + VSA +K+T K++ IT+ G L+ EIE MV +AEKYR D +K+
Sbjct: 517 VSFDVDA-DGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKE 574
Query: 524 TIQSKNALESYCFNMKSTME--DEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLADKEEY 351
I++ N ES C +++S ++ +KL + + + I D K ++ E+
Sbjct: 575 AIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDM 634
Query: 350 EHKQKELEGVCNPIITKLYQ 291
+ K E++ + + +Y+
Sbjct: 635 KKKIDEIQQLSLKVFESVYK 654
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 35.5 bits (78), Expect = 0.020
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Frame = -2
Query: 650 KSTXKENKITITXXKGRLSKEEIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKST 471
K K ++++ + RL E +E+ + D+ +T+ KNALE Y ++ ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAK 593
Query: 470 MED--EKLKDKITDSDKQIIMDKCNDTIKWL-DSNQLADKEEYEHKQKELEGVCNPI 309
++D ++ S + ++ K D WL + + K Y K ++L V PI
Sbjct: 594 LDDIYAPFTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 32.3 bits (70), Expect = 0.19
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
Frame = -3
Query: 526 TLFNRRMLSSRTAST*SPPWKMRSLRTRLLTPISKSSWTSATTPSNGSTRISWLIRKSMS 347
TL + M SS + S+ SP ++ + +P S SS++S T+ S S+ S + S S
Sbjct: 320 TLSSSSMSSSSSFSS-SPTSSSSTISSSSSSP-SSSSFSSTTSSSKSSSSFSSTVSSSSS 377
Query: 346 TSRRNWRVFATRSSRSCTRXXXXXXXXXXXXXPGSLAEH-PVREAQRPAEVPDPPSRRST 170
TS ++ SSR + S + PV A S S+
Sbjct: 378 TSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSS 437
Query: 169 KHS 161
HS
Sbjct: 438 SHS 440
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 680 REFLTVSAIEKSTXKENKITITXXKGRLSKEEIERMVNEAEKYRTED 540
R L VS ++S K + + K EE+E VNE E++R D
Sbjct: 254 RACLCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 31.5 bits (68), Expect = 0.33
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = -2
Query: 572 VNEAEKYRTEDEKQK---DTIQSKNALESYCFNMK---STMEDEKLKDKITDSD-KQIIM 414
+NE +K+ E++ + Q+ ++ N+ +E + K TD+D KQ++
Sbjct: 224 INEVKKFEDEEDTSTPNTSSFQNNSSSLDLSDNLSYLLQYLEGNRSKINATDADVKQLLS 283
Query: 413 DKCNDTIKWLDSNQLADKEEYEHKQK 336
D + KW + ++ +E YE +K
Sbjct: 284 DVKKNKSKWANDQRIGQEELYEAAEK 309
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/111 (18%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = -2
Query: 662 SAIEKSTXKENKITITXXKGRLSKEEIERMVNEAEKYR-TEDEKQKDTIQSKNALESYCF 486
++ E +++ ++ R S + + +++E + T +EKQ + S N +
Sbjct: 14 NSTEVDAAEQDAASVKINSTRASPNGSDLLNDDSEAAKITTNEKQSSPVDSHNESPNDTT 73
Query: 485 NMKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLADKEEYEHKQKE 333
K +E D + ++DK+ D + + D+N+ +++E + ++ E
Sbjct: 74 INKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDE 124
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -2
Query: 596 SKEEIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQI 420
+KEE+E +NE + E E+Q S+N ++ +K +E EKLK+ + D ++
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDVKL 1663
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 29.1 bits (62), Expect = 1.8
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Frame = -2
Query: 572 VNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKC---- 405
+NE + Y + Q DT S L S C N S L + D + ++ C
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 404 --NDTIKWLDSNQLADK 360
D+IK L N+ DK
Sbjct: 888 CVKDSIKRLGDNKFEDK 904
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 28.3 bits (60), Expect = 3.1
Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Frame = -2
Query: 653 EKSTXKENKITITXXKGRLSKEEIERMVNE-AEKYRTEDEKQKDTIQSKNALESYCFNMK 477
+K + K K + ++ +E E +EK +++K KNA ++ +M
Sbjct: 75 KKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMD 134
Query: 476 STMEDEKLKDKITDSDKQIIMDKC-NDTIKWLDSNQLADKEEYEHKQKE 333
DE+ + S K+ K +D + LD + E+ + K+K+
Sbjct: 135 DLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPBC25H2.08c |mrs2||magnesium ion transporter
Mrs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/37 (24%), Positives = 25/37 (67%)
Frame = +3
Query: 435 VSNLVLKLLIFHGGLHVEAVRLESILRLNSVLLFFIF 545
++++V +L+ G + + + + ++++ NSVLLF ++
Sbjct: 121 INSIVPVILVREGSILINLLHIRALIKANSVLLFDVY 157
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/61 (21%), Positives = 33/61 (54%)
Frame = -2
Query: 590 EEIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMD 411
EE++ +NEA+K E +++ I+ +L+ +++ +++ + S KQ +++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 410 K 408
K
Sbjct: 79 K 79
>SPBC19F8.02 |||nuclear distribution protein NUDC
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 27.5 bits (58), Expect = 5.4
Identities = 9/28 (32%), Positives = 21/28 (75%)
Frame = -2
Query: 596 SKEEIERMVNEAEKYRTEDEKQKDTIQS 513
++ +E+M+ E + RT+++K+KD +Q+
Sbjct: 122 TRATVEKMMLEQSQKRTDEQKRKDVLQN 149
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = -2
Query: 608 KGRLSKEEIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSD 429
+GR + + N+ E D+KQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 428 KQIIMDKCNDTIK 390
+ +DK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 638 KENKITITXXKGRLSKEEIERMVNEAEKYRTEDEKQKD 525
KEN + I +K++ + E EKYR E+EK+K+
Sbjct: 286 KENNLDIMIEASGFNKKQSK----ELEKYRQEEEKRKE 319
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.6 bits (56), Expect = 9.4
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 19/126 (15%)
Frame = -2
Query: 650 KSTXKENKITITXXKGRLSKEEIERMVNE----AEKYRTE----DEKQK--DTIQSKN-- 507
+ T +EN+ +I+ L KEE+E++ +E +E+Y + DE QK T++ +N
Sbjct: 584 EKTIRENEESIS-----LFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNK 638
Query: 506 ALESYCFNMKSTMEDEKLKDKITDS-------DKQIIMDKCNDTIKWLDSNQLADKEEYE 348
A E + +E K+ + DS +KQ+I K ++ +K D N+L E+ E
Sbjct: 639 AKEDSTSKTSNLLEQLKMTEAEVDSLRKENEENKQVIALKESELVKSND-NKLLLNEQIE 697
Query: 347 HKQKEL 330
+L
Sbjct: 698 SLNDQL 703
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 608 KGRLSKEEIERMVNEAEK 555
KG LSKEE+ER V +A K
Sbjct: 525 KGTLSKEELERRVYDAAK 542
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 26.6 bits (56), Expect = 9.4
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -3
Query: 535 NRRTLFNRRMLSSRTAST*SPPWKMRSLRTRLLTPISKSSWTSATTPSNGST 380
N T ++ R+ +S T S K S+ T LT IS S ++T P+NG+T
Sbjct: 171 NITTPYSNRITNSNT-SVNDITSKYLSVGTITLTTISGSDLYTSTFPANGTT 221
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -2
Query: 596 SKEEIERMVNEAEKYRTEDEKQKDTIQSKNALESYC 489
S+ E +++ E ++ EDEKQ + + K AL+ +C
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFC 334
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,241,988
Number of Sequences: 5004
Number of extensions: 43929
Number of successful extensions: 306
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 893960474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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