Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_F10_e654_12.seq
         (1579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   7.9  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   7.9  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 230 RLEDLHQLQRPYAFHRRYGACAHPPLQ 150
           R+E + +L    AF R +GA + PP +
Sbjct: 846 RIESIQRLFTRVAFRRLFGAASLPPYE 872


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +3

Query: 744 PLTTSTEKEGIQGPPSRKRSNXGVRXQCXTLRALTPVRPQ 863
           P   +T    +  PPS  R+    R    T RAL   + +
Sbjct: 555 PKRKATSPPAVATPPSTSRARTATRTATTTTRALRSAKKE 594


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,126,914
Number of Sequences: 2352
Number of extensions: 19890
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 68
effective length of database: 404,043
effective search space used: 184647651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)