Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_F09_e646_11.seq
         (1567 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L03426-1|AAA61304.1|  695|Homo sapiens XE7 protein.                    33   2.1  
BC110497-1|AAI10498.1|  695|Homo sapiens splicing factor, argini...    33   2.1  
BC110496-1|AAI10497.1|  695|Homo sapiens splicing factor, argini...    33   2.1  
AL683807-2|CAI41501.1|  695|Homo sapiens chromosome X and Y open...    33   2.1  
BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    32   5.0  
AY164485-1|AAO32798.1| 1732|Homo sapiens polycystic kidney disea...    32   5.0  
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      31   8.7  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    31   8.7  

>L03426-1|AAA61304.1|  695|Homo sapiens XE7 protein.
          Length = 695

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = -2

Query: 492 STTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWASTSR 337
           ST+P   R S   +S+ RHR E S +R G+ +       RRS RS   S SR
Sbjct: 638 STSPDHTR-SRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSR 688


>BC110497-1|AAI10498.1|  695|Homo sapiens splicing factor,
           arginine/serine-rich 17A protein.
          Length = 695

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = -2

Query: 492 STTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWASTSR 337
           ST+P   R S   +S+ RHR E S +R G+ +       RRS RS   S SR
Sbjct: 638 STSPDHTR-SRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSR 688


>BC110496-1|AAI10497.1|  695|Homo sapiens splicing factor,
           arginine/serine-rich 17A protein.
          Length = 695

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = -2

Query: 492 STTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWASTSR 337
           ST+P   R S   +S+ RHR E S +R G+ +       RRS RS   S SR
Sbjct: 638 STSPDHTR-SRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSR 688


>AL683807-2|CAI41501.1|  695|Homo sapiens chromosome X and Y open
           reading frame 3 protein.
          Length = 695

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = -2

Query: 492 STTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWASTSR 337
           ST+P   R S   +S+ RHR E S +R G+ +       RRS RS   S SR
Sbjct: 638 STSPDHTR-SRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSR 688


>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = -2

Query: 534 GLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEVSPD 415
           G S  R +HD+  PS  PR+ R  S+D S PR     SPD
Sbjct: 212 GASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPD 250


>AY164485-1|AAO32798.1| 1732|Homo sapiens polycystic kidney disease
           1-like 3 protein.
          Length = 1732

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = -1

Query: 763 KGDRCGXLRYYXSWRKGDVLQGD*VG*RQGFPSHDVVKRRPVNCNTTHYRANWVPGP 593
           KGD+C  L+YY   + GD L GD    R G  SH   + +         R    PGP
Sbjct: 125 KGDKC-LLKYYFICQTGDFLDGDAHYERNGNNSHLYQRHKKTKRGVAIARDKMPPGP 180


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 217 TPLRPKPA*PNPARICSLWSPESREALNKVTLLVAL 324
           TP  P P  P PA +CS  SPE R+   +  LL+ L
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQWEEQGELLLPL 103


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 217 TPLRPKPA*PNPARICSLWSPESREALNKVTLLVAL 324
           TP  P P  P PA +CS  SPE R+   +  LL+ L
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQWEEQGELLLPL 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,287,367
Number of Sequences: 237096
Number of extensions: 3097018
Number of successful extensions: 6196
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6192
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23302260226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)