Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_F08_e638_12.seq
(1567 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 252 2e-65
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 248 4e-64
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 244 5e-63
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 201 5e-50
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 193 1e-47
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 186 1e-45
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 164 5e-39
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 164 5e-39
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 159 1e-37
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 148 5e-34
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 143 1e-32
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 134 8e-30
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 120 8e-26
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 108 4e-22
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 101 7e-20
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 62 4e-08
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 62 4e-08
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 59 4e-07
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 58 6e-07
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 57 1e-06
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 56 3e-06
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 55 4e-06
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 55 6e-06
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 54 8e-06
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 52 4e-05
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 52 5e-05
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 51 7e-05
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 50 2e-04
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 50 2e-04
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 48 5e-04
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 47 0.001
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 46 0.004
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 44 0.011
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 44 0.014
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 42 0.044
UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 42 0.044
UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma j... 38 0.95
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 36 2.2
UniRef50_Q2H164 Cluster: Putative uncharacterized protein; n=1; ... 36 3.8
UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcin... 35 6.7
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 252 bits (616), Expect = 2e-65
Identities = 127/176 (72%), Positives = 140/176 (79%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHG 71
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
RVRLL+SKGHSCYRPRR GERKRKSV GCIVDANLSVL LVIV+KG ++IPGLTD VPR
Sbjct: 72 RVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPR 131
Query: 490 RLGPKRASKIRKLFNLKKRRRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
RLGPKRAS+IRKLFNL K ++ L K K P TKAPKIQRLV+P
Sbjct: 132 RLGPKRASRIRKLFNLSKEDDVRQYVVRKP--LNKEGKK---PRTKAPKIQRLVTP 182
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 248 bits (606), Expect = 4e-64
Identities = 120/175 (68%), Positives = 140/175 (80%)
Frame = +1
Query: 133 QKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 312
QK FEV+D+HKLR FY+KRMG E+ AD LGDEWKGYV ++AGGNDKQGFPMKQGVLTN+R
Sbjct: 13 QKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTR 72
Query: 313 VRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRR 492
VRLL+ KGHSCYRPRR GERKRKSV GCIVD NLS LAL++V+KG ++IPGLTD V RR
Sbjct: 73 VRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRR 132
Query: 493 LGPKRASKIRKLFNLKKRRRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
LGPKRAS IRKL+NL K ++ LP++ K P TKAPKIQRL++P
Sbjct: 133 LGPKRASNIRKLYNLTKEDDVRQYVVKRP--LPEKDGK--KPRTKAPKIQRLITP 183
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 244 bits (597), Expect = 5e-63
Identities = 116/176 (65%), Positives = 136/176 (77%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQGFPMKQG++TN
Sbjct: 12 CQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQGFPMKQGIMTNG 71
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
RVRLL+SKGHSCYRPRR GERKRKSV GCIVD+ LSVL+LVIV+KG Q+IPGLTD +PR
Sbjct: 72 RVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNTIPR 131
Query: 490 RLGPKRASKIRKLFNLKKRRRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
RLGPKR KIRK+FNL K ++ LP++ K +KAPKIQRLV+P
Sbjct: 132 RLGPKRVGKIRKMFNLSKEDDVRQYVIRRP--LPEKEGK--KAKSKAPKIQRLVTP 183
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 201 bits (490), Expect = 5e-50
Identities = 100/174 (57%), Positives = 124/174 (71%)
Frame = +1
Query: 133 QKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 312
QK E+ D+ K IF++KRMG+ V+AD LG+E+KGYVL++ GGNDKQGFPM+QGVL R
Sbjct: 13 QKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQGFPMRQGVLFKGR 72
Query: 313 VRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRR 492
VR+LM KGH YRPR+DGE KRKS+ GCIV ++ VLAL +V+KGA EI GLTD VPRR
Sbjct: 73 VRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRR 132
Query: 493 LGPKRASKIRKLFNLKKRRRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVS 654
LGPKR +K+R+LF KK VA++ K KAPKIQRLV+
Sbjct: 133 LGPKRLTKLRRLFGFKKAD--GVAIVQKNLIRRTWTTKDGKKRQKAPKIQRLVT 184
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 193 bits (470), Expect = 1e-47
Identities = 97/176 (55%), Positives = 122/176 (69%), Gaps = 1/176 (0%)
Frame = +1
Query: 133 QKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 312
QK E+ D+ K IF +K+MG+EV+ D LGDE+KGYV ++AGGNDK GFPMKQGV+ R
Sbjct: 13 QKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDGFPMKQGVMVRGR 72
Query: 313 VRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRR 492
VRLL+S+GHSC+ RR G RKRKSV GCIV ++ VLAL IV+KG EI GLT +PR+
Sbjct: 73 VRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPRK 132
Query: 493 LGPKRASKIRKLFNLKKRRRCAVAML*NAFYLPKRAXKMXNPD-TKAPKIQRLVSP 657
LGPKRA+ I+KLF LKK +L + + D TK PKIQRL++P
Sbjct: 133 LGPKRANNIKKLFGLKKEDD---PILIKKSVIRRTFKTAKGKDRTKCPKIQRLITP 185
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 186 bits (453), Expect = 1e-45
Identities = 88/137 (64%), Positives = 104/137 (75%)
Frame = +1
Query: 133 QKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 312
QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQGFPM QGVLTN+R
Sbjct: 54 QKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQGFPMMQGVLTNNR 113
Query: 313 VRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRR 492
VRLL KG CYRPR+ GE++RKSV GCIV +LS L L +V+KG EIPGLTD V ++
Sbjct: 114 VRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKK 173
Query: 493 LGPKRASKIRKLFNLKK 543
LGPKRA+KIRKLFNL K
Sbjct: 174 LGPKRATKIRKLFNLDK 190
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 164 bits (399), Expect = 5e-39
Identities = 83/136 (61%), Positives = 101/136 (74%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKLFEVVDEHKLR+FYEKRMG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
R+RLL K HSC+ PR + RK K+V V+AN+S L LV+++K P
Sbjct: 72 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 120
Query: 490 RLGPKRASKIRKLFNL 537
RLGP R+S I K++ L
Sbjct: 121 RLGPVRSSNISKIYYL 136
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 164 bits (399), Expect = 5e-39
Identities = 81/174 (46%), Positives = 115/174 (66%)
Frame = +1
Query: 133 QKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 312
Q + ++ D L YEKR+G++++ + LG ++KGY+ R+ GG DKQGFPMKQGV+T R
Sbjct: 13 QVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQGFPMKQGVITPRR 72
Query: 313 VRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRR 492
+RLL+ G SCYRPR+DGERKRK+V GCI+ +S L V+++KG +EI GLT VPRR
Sbjct: 73 IRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTAVPRR 132
Query: 493 LGPKRASKIRKLFNLKKRRRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVS 654
GPKRAS +R +F + + A + + KR K +PK+QRL++
Sbjct: 133 FGPKRASTLRAMFGITDSKFDASKL------VLKREVKPGK--FTSPKVQRLIT 178
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 159 bits (387), Expect = 1e-37
Identities = 73/137 (53%), Positives = 100/137 (72%)
Frame = +1
Query: 136 KLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRV 315
K F+ +E R F +KR+G+EVDA LGDE+KGY+L++ GG DK GFPM GV TN+RV
Sbjct: 13 KKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGFPMMTGVATNNRV 72
Query: 316 RLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRL 495
RLL+ + CY+P R+GER+RK+V G IV ++SVL ++V+KG EI G+T+ +P R
Sbjct: 73 RLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDALPMRA 132
Query: 496 GPKRASKIRKLFNLKKR 546
GP+RAS RKLFNL ++
Sbjct: 133 GPQRASHFRKLFNLSQK 149
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 148 bits (358), Expect = 5e-34
Identities = 81/182 (44%), Positives = 113/182 (62%), Gaps = 4/182 (2%)
Frame = +1
Query: 136 KLFEVVDEHKLRI-FYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 312
K FE+ DE R+ + R+G EVD + G E+KGY+ R+ GG+DK GFPM GVL +SR
Sbjct: 14 KQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSR 73
Query: 313 VRLLMSKGHSCYRPRR--DGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVP 486
V LL+ +G + R GER+RK+V GC++ ++++++ + I + G Q I G+TD P
Sbjct: 74 VSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAP 133
Query: 487 RRLGPKRASKIRKLFNLKKRRRCAVAML*NAFYLPKRAXKMXNPD-TKAPKIQRLVSPGC 663
RRLGPKRASKIRKLFNL + + + +R K D KAPKIQRL++P
Sbjct: 134 RRLGPKRASKIRKLFNLSRTEDV------RKYVVRRRVVKSGKKDRLKAPKIQRLITPRV 187
Query: 664 SA 669
A
Sbjct: 188 KA 189
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 143 bits (346), Expect = 1e-32
Identities = 70/134 (52%), Positives = 89/134 (66%)
Frame = +1
Query: 136 KLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRV 315
K + D K + + RM E D LG+E+ G R+ GGND QGFPM QGVL + R
Sbjct: 20 KSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGFPMYQGVLKSQRA 79
Query: 316 RLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRL 495
RLL+ +G CY RR+GERKRKS+ GCIV +L L++V+V G + +PGLTD VP+RL
Sbjct: 80 RLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRL 139
Query: 496 GPKRASKIRKLFNL 537
PKRASKIR+LF L
Sbjct: 140 VPKRASKIRRLFGL 153
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 134 bits (323), Expect = 8e-30
Identities = 75/136 (55%), Positives = 91/136 (66%)
Frame = +1
Query: 247 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLA 426
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+ GCIV ++ VLA
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 427 LVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKRRRCAVAML*NAFYLPKRAXK 606
L +V+KGA EI GLTD VPRRLGPKR +K+R+LF KK R ++ + + P+R K
Sbjct: 116 LQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADR----VISSEEHGPQRYGK 171
Query: 607 MXNPDTKAPKIQRLVS 654
KAPKIQRLV+
Sbjct: 172 KRQ---KAPKIQRLVT 184
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 120 bits (290), Expect = 8e-26
Identities = 60/146 (41%), Positives = 93/146 (63%)
Frame = +1
Query: 139 LFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 318
+FE+ +++R+ Y+K++G + D +LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 319 LLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLG 498
L+SKG + YR RR G R+RKSV G IV + VL L+I+R G +EI GLT+
Sbjct: 60 PLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHL 119
Query: 499 PKRASKIRKLFNLKKRRRCAVAML*N 576
P++ K+RK+F + + V + N
Sbjct: 120 PRKEKKLRKMFGVPDEEKNVVGYIRN 145
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 108 bits (259), Expect = 4e-22
Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Frame = +1
Query: 133 QKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 312
Q E+ DE KLRI Y K++ ++D ++G EW + + GG DKQGFPMK+G+L+ SR
Sbjct: 13 QHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQGFPMKEGILSPSR 72
Query: 313 VRLLMSKGHSCYR--PRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVP 486
V++L+ KG + R + GER RKSV GCIV +SVL + ++ ++ +T+
Sbjct: 73 VKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKNSE 131
Query: 487 RRLGPKRASKIRKLFNLKK 543
+ L KR+S +RK+ L K
Sbjct: 132 KTLTHKRSSNLRKVLCLTK 150
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 101 bits (241), Expect = 7e-20
Identities = 44/66 (66%), Positives = 52/66 (78%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKL E DE K R FYEK M EV AD LG+EWKGY++R++GGNDKQGFPMKQ VLT+
Sbjct: 12 CQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQGFPMKQDVLTHD 71
Query: 310 RVRLLM 327
R+ LL+
Sbjct: 72 RIHLLL 77
Score = 50.4 bits (115), Expect = 1e-04
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1
Query: 451 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKK 543
++IPGLTD PR +GPKRAS+IRKLFNL K
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSK 110
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 62.1 bits (144), Expect = 4e-08
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +1
Query: 136 KLFEV-VDEHKLRIFYEKRMGREVDADLLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 309
K F++ ++ R F KR+G V A +LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRK 444
+ R L+S G + PR GER+RK+V G + ++ + IV++
Sbjct: 193 KKRALLS-GPPGFWPREKGERRRKTVRGNTISEDIVQINTKIVKQ 236
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 62.1 bits (144), Expect = 4e-08
Identities = 32/91 (35%), Positives = 56/91 (61%)
Frame = +1
Query: 187 RMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 366
++G E + +LG KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKG 86
Query: 367 ERKRKSVXGCIVDANLSVLALVIVRKGAQEI 459
R+RK+V G + ++S + + + +G Q +
Sbjct: 87 LRRRKTVRGNTIADDISQINVKVSERGEQTL 117
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 58.8 bits (136), Expect = 4e-07
Identities = 35/108 (32%), Positives = 60/108 (55%)
Frame = +1
Query: 124 RVCQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLT 303
R QK+ E + ++L K++G + ++ D Y L++ GG D+ GFPM+ +
Sbjct: 14 RAYQKVVEGANANRL---IGKQIGDVISGTIV-DLPPDYELKITGGTDRDGFPMRPDLPG 69
Query: 304 NSRVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKG 447
+R RLL+S G +RP+ G RKRK V G ++ ++ + V+V+ G
Sbjct: 70 TARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 58.0 bits (134), Expect = 6e-07
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWK 234
CQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 12 CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 57.2 bits (132), Expect = 1e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +1
Query: 244 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVL 423
L++ GG DK GFPM+ V RV++L+S+G +RPR GER++K+V G + N+ +
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQV 119
Query: 424 ALVIV 438
+ IV
Sbjct: 120 NMKIV 124
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 56.0 bits (129), Expect = 3e-06
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = -2
Query: 531 E*FADFRRTLGT*TAGNFTVSQSRNFLCTFADNDQG*D*KVSINNATXNRLAFPLTVTTW 352
E + RTL T +F + ++R+ DNDQ V ++AT RLA T+ +
Sbjct: 107 EELTNLARTLRTTETRHFGIGEARDVGVALLDNDQVQHGNVLGDDATTARLASAFTLASA 166
Query: 351 SVARVA--F*HQETYTAVSQDSLFHREALLVVTAGNTENITFPFV 223
A A H++ +T V Q +L H EALLVVT + E+++ PF+
Sbjct: 167 VAAEAARALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 55.2 bits (127), Expect = 4e-06
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Frame = +1
Query: 127 VCQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTN 306
V Q L EV + KLR FYEK M E+ + +E N + F MKQ VL +
Sbjct: 11 VYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIFSMKQEVLIH 59
Query: 307 SRVRLLMSKGHS-CYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 483
RV LL++ HS Y+P R E S+ V +S+L +VI+ G ++IPG T
Sbjct: 60 FRVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRKDIPGQTKRWA 118
Query: 484 PRR 492
P+R
Sbjct: 119 PKR 121
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 54.8 bits (126), Expect = 6e-06
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +1
Query: 211 DLLGDEWKGYV-LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSV 387
+L G E+ V L + GG DK GFPM+ + RVR+L+SKG +RP+ GER++K+V
Sbjct: 49 ELFGKEFPEDVKLEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTV 107
Query: 388 XG 393
G
Sbjct: 108 RG 109
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 54.4 bits (125), Expect = 8e-06
Identities = 26/94 (27%), Positives = 55/94 (58%)
Frame = +1
Query: 184 KRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 363
K++G E+ ++ E +GY L++ GG+D+ GF M+ + ++R+L+ +G Y +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEK 84
Query: 364 GERKRKSVXGCIVDANLSVLALVIVRKGAQEIPG 465
G R+RKS+ G + +++++ +V G+ + G
Sbjct: 85 GLRRRKSLRGNTISKDITLINTKVVEYGSAPLGG 118
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 52.0 bits (119), Expect = 4e-05
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 151 VDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMS 330
VD F + +G VD +G + GY + + GG+D G PM++ V + + +L+
Sbjct: 21 VDGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDDAGRPMREDVDGSDLMEVLL- 77
Query: 331 KGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGL--TDGE 480
+G + + P DGERKR +V G V ++ L + I G + + L DG+
Sbjct: 78 EGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHGEEPVAELLGADGD 129
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 51.6 bits (118), Expect = 5e-05
Identities = 33/128 (25%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Frame = +1
Query: 154 DEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 333
D+ + +++G ++ +LG+++ + GG+DKQGF +K+ + T R+++ + K
Sbjct: 19 DDEFIEHIIGRKIGDTIEGSILGEDFSRNEFLINGGHDKQGFLLKKNLNTFERLKINVKK 78
Query: 334 GHSCYRP--RRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKR 507
G R +R K+++V G I+ + +S + LV + +E E ++L KR
Sbjct: 79 GSLGNRSHFKRKNLTKKRTVRGGILSSEISSINLVKLPNNVKESSVFPSKE--QKLA-KR 135
Query: 508 ASKIRKLF 531
+K++ LF
Sbjct: 136 VTKLKTLF 143
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 51.2 bits (117), Expect = 7e-05
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +1
Query: 187 RMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 366
++G D L+G GY L + GG+D GFPM + + R+L+S G + PR G
Sbjct: 132 KIGDTFDGGLVG--LPGYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKG 188
Query: 367 ERKRKSVXGCIVDANLSVLALVIV 438
ER+RK+V G + ++ + VIV
Sbjct: 189 ERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 50.0 bits (114), Expect = 2e-04
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +1
Query: 151 VDEHKLRIFYEKRMGREVDAD-LLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 327
VD++K ++G +A+ L+G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 328 SKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVR 441
S G + P +GER+RK++ G + + + +IVR
Sbjct: 178 S-GPPGFYPNENGERRRKTIRGNTISQEIVQINTIIVR 214
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 49.6 bits (113), Expect = 2e-04
Identities = 32/76 (42%), Positives = 44/76 (57%)
Frame = +1
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
R+RLL K HSC+ PR + RK K+V V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 490 RLGPKRASKIRKLFNL 537
RLGP R+S I K++ L
Sbjct: 68 RLGPVRSSNISKIYYL 83
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 48.4 bits (110), Expect = 5e-04
Identities = 26/68 (38%), Positives = 42/68 (61%)
Frame = +1
Query: 184 KRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 363
K++G EVDA LG GY + + GG+D+ G P ++ + R +LL+++G + P +
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVME 88
Query: 364 GERKRKSV 387
GERKRK +
Sbjct: 89 GERKRKMI 96
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 47.2 bits (107), Expect = 0.001
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +1
Query: 190 MGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 369
+G D L+G G ++ GG D G PM GV + R ++L++ G + PR GE
Sbjct: 142 IGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGE 198
Query: 370 RKRKSVXGCIV 402
R+RKSV G ++
Sbjct: 199 RRRKSVRGRMI 209
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 45.6 bits (103), Expect = 0.004
Identities = 29/95 (30%), Positives = 48/95 (50%)
Frame = +1
Query: 184 KRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 363
K +G VD + G GY +++ GG D GF MK + R R+L + G Y P+
Sbjct: 32 KSIGDVVDGSIFG--LAGYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG-YVPKLP 88
Query: 364 GERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGL 468
G+R+RK + G + ++ + +V G++ I L
Sbjct: 89 GQRRRKMMRGKEIAPDIVQVNAKVVEYGSKSIKAL 123
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 44.0 bits (99), Expect = 0.011
Identities = 28/99 (28%), Positives = 53/99 (53%)
Frame = +1
Query: 184 KRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 363
+++G EVD + GY +++ GG+ GF M+ + T + ++L+ K S YR ++
Sbjct: 32 RKIGEEVDGVFF--DLVGYKMKITGGSSVDGFAMRPDLQTQGKKQILV-KYTSGYR-GKN 87
Query: 364 GERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGE 480
G RKR + G I+ ++++ + L I + G I D +
Sbjct: 88 GIRKRITARGSIIGSDITQINLKITQYGPTPIEEKKDDQ 126
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 43.6 bits (98), Expect = 0.014
Identities = 28/68 (41%), Positives = 37/68 (54%)
Frame = +1
Query: 190 MGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 369
+G E DA LG E K +R+ GG+DK G PM+ V +R +L+S+G R G
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGG 94
Query: 370 RKRKSVXG 393
R RK V G
Sbjct: 95 RTRKLVRG 102
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 41.9 bits (94), Expect = 0.044
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +1
Query: 190 MGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 369
+G+E DA ++G K L++ GG+DK G PM+ + +R +L+SKG + G+
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQ 88
Query: 370 RKRKSVXGCIVDANL 414
R RK + G V +
Sbjct: 89 RVRKLMRGNTVSEEI 103
>UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S6e -
Pyrobaculum aerophilum
Length = 148
Score = 41.9 bits (94), Expect = 0.044
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +1
Query: 142 FEVVDEHKLRIFYEKRMGREVDADLLGDEW---KGYVLRVAGGNDKQGFPMKQGVLTNSR 312
FE+ D R F ++G E+D +L D KG +R+ GG+ +G PM GV +
Sbjct: 19 FEIKDPLAQR-FIGLKIGDELDGVILKDLIELPKGAKIRITGGSGIEGAPMHPGVPGPVK 77
Query: 313 VRLLMSKGHSCYRPRRDGERKRKSVXG-CIVDANLSVLALVIVRKGAQEIPGLTDG 477
+ +++ G Y P + G +K+K V G I D+ + + A+++ K P + G
Sbjct: 78 -KYILADGPPGYWPPKKGMKKKKLVRGNTISDSIVQINAVIVYPKDYTGPPAIPLG 132
>UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04650 protein - Schistosoma
japonicum (Blood fluke)
Length = 219
Score = 37.5 bits (83), Expect = 0.95
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 259 RRQHGEHNLSIRRLEDLHQLHGPYAFHRRYGACAHPPLQITSDIPV 122
R++ GE ++ + LEDLH+LH + RR+G P L + P+
Sbjct: 154 RKRPGEEDILLNYLEDLHKLHEAWLIERRFGPLPAPVLVFDCNAPL 199
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 36.3 bits (80), Expect = 2.2
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 178 YEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGV 297
Y K++G +D +G + GY L++ GG+D GFPM++ V
Sbjct: 31 YGKKIGDTIDGSKIGLD--GYELKITGGSDIAGFPMRKEV 68
>UniRef50_Q2H164 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 744
Score = 35.5 bits (78), Expect = 3.8
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = -3
Query: 524 LRILDARLGPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPXTDLRFLSPSRRGL* 345
LR +A GP RRG +P +SP S P R+ R R+ ++ QP + +PS+ G
Sbjct: 361 LRSNNAPDGPARRGQTPPISPPPSETPTRSAPREAMGRILTSSQPPAATQ--TPSQTG-- 416
Query: 344 QEWP 333
Q +P
Sbjct: 417 QRYP 420
>UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcina
acetivorans|Rep: Glycosyltransferase - Methanosarcina
acetivorans
Length = 812
Score = 34.7 bits (76), Expect = 6.7
Identities = 23/121 (19%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Frame = +1
Query: 121 QRVCQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLR------VAGGNDKQGF- 279
Q++ +K+ +++ ++ ++MG + G WK + + V+ K F
Sbjct: 349 QKIAEKINYLIENPEIA----RKMGFAAYQSVKGITWKNFSSQLVAKKGVSAPVKKDIFS 404
Query: 280 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVXGCIV-DANLSVLALVIVRKGAQE 456
P K+ ++T++R ++L+ +SCY PR G+ + ++ + + ++++ +++ K Q
Sbjct: 405 PAKKNIITSNREKILVLATYSCYPPRGGGQHRLYNIYSLLAKEFDVTICSIIEANKQYQN 464
Query: 457 I 459
+
Sbjct: 465 L 465
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,127,227
Number of Sequences: 1657284
Number of extensions: 14212731
Number of successful extensions: 28912
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 28100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28880
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 168167541075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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