Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_F08_e638_12.seq
(1567 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 261 2e-69
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 261 2e-69
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 261 2e-69
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 261 2e-69
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 261 2e-69
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 261 2e-69
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 219 1e-56
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 219 1e-56
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 164 3e-40
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 164 3e-40
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 52 3e-06
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 52 3e-06
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 50 1e-05
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 50 1e-05
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 261 bits (640), Expect = 2e-69
Identities = 127/179 (70%), Positives = 145/179 (81%), Gaps = 3/179 (1%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKLFEVVDEHKLR+FYEKRMG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
RVRLL+ KGHSCYRPRR GERKRKSV GCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 72 RVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 131
Query: 490 RLGPKRASKIRKLFNLKKR---RRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
RLGPKRASKIRKL+NL K RR V P A +KAPKIQRL++P
Sbjct: 132 RLGPKRASKIRKLYNLSKEDDVRRFVVRR-------PLPAKDNKKATSKAPKIQRLITP 183
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 261 bits (640), Expect = 2e-69
Identities = 127/179 (70%), Positives = 145/179 (81%), Gaps = 3/179 (1%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKLFEVVDEHKLR+FYEKRMG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
RVRLL+ KGHSCYRPRR GERKRKSV GCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 72 RVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 131
Query: 490 RLGPKRASKIRKLFNLKKR---RRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
RLGPKRASKIRKL+NL K RR V P A +KAPKIQRL++P
Sbjct: 132 RLGPKRASKIRKLYNLSKEDDVRRFVVRR-------PLPAKDNKKATSKAPKIQRLITP 183
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 261 bits (640), Expect = 2e-69
Identities = 127/179 (70%), Positives = 145/179 (81%), Gaps = 3/179 (1%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKLFEVVDEHKLR+FYEKRMG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
RVRLL+ KGHSCYRPRR GERKRKSV GCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 72 RVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 131
Query: 490 RLGPKRASKIRKLFNLKKR---RRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
RLGPKRASKIRKL+NL K RR V P A +KAPKIQRL++P
Sbjct: 132 RLGPKRASKIRKLYNLSKEDDVRRFVVRR-------PLPAKDNKKATSKAPKIQRLITP 183
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 261 bits (640), Expect = 2e-69
Identities = 127/179 (70%), Positives = 145/179 (81%), Gaps = 3/179 (1%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKLFEVVDEHKLR+FYEKRMG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
RVRLL+ KGHSCYRPRR GERKRKSV GCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 72 RVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 131
Query: 490 RLGPKRASKIRKLFNLKKR---RRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
RLGPKRASKIRKL+NL K RR V P A +KAPKIQRL++P
Sbjct: 132 RLGPKRASKIRKLYNLSKEDDVRRFVVRR-------PLPAKDNKKATSKAPKIQRLITP 183
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 261 bits (640), Expect = 2e-69
Identities = 127/179 (70%), Positives = 145/179 (81%), Gaps = 3/179 (1%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKLFEVVDEHKLR+FYEKRMG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 15 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 74
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
RVRLL+ KGHSCYRPRR GERKRKSV GCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 75 RVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 134
Query: 490 RLGPKRASKIRKLFNLKKR---RRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
RLGPKRASKIRKL+NL K RR V P A +KAPKIQRL++P
Sbjct: 135 RLGPKRASKIRKLYNLSKEDDVRRFVVRR-------PLPAKDNKKATSKAPKIQRLITP 186
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 261 bits (640), Expect = 2e-69
Identities = 127/179 (70%), Positives = 145/179 (81%), Gaps = 3/179 (1%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKLFEVVDEHKLR+FYEKRMG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
RVRLL+ KGHSCYRPRR GERKRKSV GCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 72 RVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 131
Query: 490 RLGPKRASKIRKLFNLKKR---RRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
RLGPKRASKIRKL+NL K RR V P A +KAPKIQRL++P
Sbjct: 132 RLGPKRASKIRKLYNLSKEDDVRRFVVRR-------PLPAKDNKKATSKAPKIQRLITP 183
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 219 bits (534), Expect = 1e-56
Identities = 108/159 (67%), Positives = 125/159 (78%), Gaps = 3/159 (1%)
Frame = +1
Query: 190 MGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 369
MG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 370 RKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKR- 546
RKRKSV GCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NL K
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 547 --RRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
RR V P A +KAPKIQRL++P
Sbjct: 121 DVRRFVVRR-------PLPAKDNKKATSKAPKIQRLITP 152
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 219 bits (534), Expect = 1e-56
Identities = 108/159 (67%), Positives = 125/159 (78%), Gaps = 3/159 (1%)
Frame = +1
Query: 190 MGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 369
MG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 370 RKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKR- 546
RKRKSV GCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NL K
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 547 --RRCAVAML*NAFYLPKRAXKMXNPDTKAPKIQRLVSP 657
RR V P A +KAPKIQRL++P
Sbjct: 121 DVRRFVVRR-------PLPAKDNKKATSKAPKIQRLITP 152
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 164 bits (399), Expect = 3e-40
Identities = 83/136 (61%), Positives = 101/136 (74%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKLFEVVDEHKLR+FYEKRMG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
R+RLL K HSC+ PR + RK K+V V+AN+S L LV+++K P
Sbjct: 72 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 120
Query: 490 RLGPKRASKIRKLFNL 537
RLGP R+S I K++ L
Sbjct: 121 RLGPVRSSNISKIYYL 136
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 164 bits (399), Expect = 3e-40
Identities = 83/136 (61%), Positives = 101/136 (74%)
Frame = +1
Query: 130 CQKLFEVVDEHKLRIFYEKRMGREVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 309
CQKLFEVVDEHKLR+FYEKRMG+ V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
R+RLL K HSC+ PR + RK K+V V+AN+S L LV+++K P
Sbjct: 72 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 120
Query: 490 RLGPKRASKIRKLFNL 537
RLGP R+S I K++ L
Sbjct: 121 RLGPVRSSNISKIYYL 136
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 51.6 bits (118), Expect = 3e-06
Identities = 33/78 (42%), Positives = 45/78 (57%)
Frame = +1
Query: 304 NSRVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 483
N R+RLL K HSC+ PR + RK K+V V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 484 PRRLGPKRASKIRKLFNL 537
P RLGP R+S I K++ L
Sbjct: 54 PCRLGPVRSSNISKIYYL 71
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 51.6 bits (118), Expect = 3e-06
Identities = 33/78 (42%), Positives = 45/78 (57%)
Frame = +1
Query: 304 NSRVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 483
N R+RLL K HSC+ PR + RK K+V V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 484 PRRLGPKRASKIRKLFNL 537
P RLGP R+S I K++ L
Sbjct: 54 PCRLGPVRSSNISKIYYL 71
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/76 (42%), Positives = 44/76 (57%)
Frame = +1
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
R+RLL K HSC+ PR + RK K+V V+AN+S L LV+++K P
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 69
Query: 490 RLGPKRASKIRKLFNL 537
RLGP R+S I K++ L
Sbjct: 70 RLGPVRSSNISKIYYL 85
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/76 (42%), Positives = 44/76 (57%)
Frame = +1
Query: 310 RVRLLMSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 489
R+RLL K HSC+ PR + RK K+V V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 490 RLGPKRASKIRKLFNL 537
RLGP R+S I K++ L
Sbjct: 68 RLGPVRSSNISKIYYL 83
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,314,661
Number of Sequences: 53049
Number of extensions: 686962
Number of successful extensions: 1489
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8798584248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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