Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_F07_e630_11.seq
         (1583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   7.3  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   7.3  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   7.3  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   7.3  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   7.3  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   7.3  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   7.3  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   7.3  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   7.3  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   9.6  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   9.6  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    23   9.6  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    23   9.6  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    23   9.6  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    23   9.6  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 703 QIKKT*SKSKYMTIKFKNNFIISILSNSYRLLNKISFYNN 584
           +  K  S+ +    + K   IIS LSN+Y+  N  ++ NN
Sbjct: 61  ETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNN 100


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 703 QIKKT*SKSKYMTIKFKNNFIISILSNSYRLLNKISFYNN 584
           +  K  S+ +    + K   IIS LSN+Y+  N  ++ NN
Sbjct: 61  ETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNN 100


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 703 QIKKT*SKSKYMTIKFKNNFIISILSNSYRLLNKISFYNN 584
           +  K  S+ +    + K   IIS LSN+Y+  N  ++ NN
Sbjct: 61  ETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNN 100


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 703 QIKKT*SKSKYMTIKFKNNFIISILSNSYRLLNKISFYNN 584
           +  K  S+ +    + K   IIS LSN+Y+  N  ++ NN
Sbjct: 61  ETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNN 100


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 703 QIKKT*SKSKYMTIKFKNNFIISILSNSYRLLNKISFYNN 584
           +  K  S+ +    + K   IIS LSN+Y+  N  ++ NN
Sbjct: 61  ETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNN 100


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 703 QIKKT*SKSKYMTIKFKNNFIISILSNSYRLLNKISFYNN 584
           +  K  S+ +    + K   IIS LSN+Y+  N  ++ NN
Sbjct: 61  ETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNN 100


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 703 QIKKT*SKSKYMTIKFKNNFIISILSNSYRLLNKISFYNN 584
           +  K  S+ +    + K   IIS LSN+Y+  N  ++ NN
Sbjct: 61  ETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNN 100


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 703 QIKKT*SKSKYMTIKFKNNFIISILSNSYRLLNKISFYNN 584
           +  K  S+ +    + K   IIS LSN+Y+  N  ++ NN
Sbjct: 294 ETSKERSRDRTERERSKEPKIISSLSNNYKYSNYNNYNNN 333


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 218 RAVPNDSTLLNKYPII 265
           R +PN+S L+ ++PI+
Sbjct: 133 RPLPNESQLIKRHPIV 148


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 643 IISILSNSYRLLNKISFYNN 584
           IIS LSN+Y+  N  ++ NN
Sbjct: 81  IISSLSNNYKYSNYNNYNNN 100


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 643 IISILSNSYRLLNKISFYNN 584
           IIS LSN+Y+  N  ++ NN
Sbjct: 81  IISSLSNNYKYSNYNNYNNN 100


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 643 IISILSNSYRLLNKISFYNN 584
           IIS LSN+Y+  N  ++ NN
Sbjct: 81  IISSLSNNYKYSNYNNYNNN 100


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 643 IISILSNSYRLLNKISFYNN 584
           IIS LSN+Y+  N  ++ NN
Sbjct: 81  IISSLSNNYKYSNYNNYNNN 100


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 643 IISILSNSYRLLNKISFYNN 584
           IIS LSN+Y+  N  ++ NN
Sbjct: 81  IISSLSNNYKYSNYNNYNNN 100


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 643 IISILSNSYRLLNKISFYNN 584
           IIS LSN+Y+  N  ++ NN
Sbjct: 81  IISSLSNNYKYSNYNNYNNN 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,013
Number of Sequences: 438
Number of extensions: 4848
Number of successful extensions: 40
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 55745250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)