Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_F05_e614_11.seq
         (1568 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)                      122   8e-28
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)             112   8e-25
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)                        81   2e-15
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)                       57   4e-08
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)                     38   0.022
SB_18205| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.47 
SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   1.1  
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   1.1  
SB_39087| Best HMM Match : ATP-synt_DE_N (HMM E-Value=4.1)             30   5.8  
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)          29   7.7  

>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1097

 Score =  122 bits (294), Expect = 8e-28
 Identities = 51/83 (61%), Positives = 70/83 (84%)
 Frame = +1

Query: 4   KNSKDTIQSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAXK 183
           +  +D IQ+KN+LESY ++ KST+ED+K+KDKI++ DK+ I+DKC + +KWLD+NQ A K
Sbjct: 532 EKQRDRIQTKNSLESYAYSMKSTVEDDKVKDKISEEDKKAILDKCTEVLKWLDTNQTAEK 591

Query: 184 EEYEHKQKELEGVCNPIITKLYQ 252
           +E+E+ QKELE VCNPIITKLYQ
Sbjct: 592 DEFEYHQKELEKVCNPIITKLYQ 614


>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 746

 Score =  112 bits (269), Expect = 8e-25
 Identities = 48/80 (60%), Positives = 65/80 (81%)
 Frame = +1

Query: 13  KDTIQSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAXKEEY 192
           ++ IQSKN+LESY F+ KSTMEDEK+KDK+++ +++ ++ +C  T+ WL+ NQ A KEE 
Sbjct: 627 RERIQSKNSLESYAFSMKSTMEDEKVKDKLSEDEREKVISRCKATLDWLEHNQSAEKEEI 686

Query: 193 EHKQKELEGVCNPIITKLYQ 252
           +  QKELEGVCNPIITKLYQ
Sbjct: 687 DAHQKELEGVCNPIITKLYQ 706


>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 640

 Score = 81.0 bits (191), Expect = 2e-15
 Identities = 32/79 (40%), Positives = 54/79 (68%)
 Frame = +1

Query: 13  KDTIQSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAXKEEY 192
           ++ I ++N LESY F  KS + +  L+ K++ SDK  + +K  + + WL+ N LA KEE+
Sbjct: 534 REKIAARNRLESYAFGVKSAISEPSLEGKLSQSDKDTVKNKVEEVLNWLEKNSLAEKEEF 593

Query: 193 EHKQKELEGVCNPIITKLY 249
           E ++KEL+ VC+PI+ K++
Sbjct: 594 EEQEKELQRVCSPIMAKVH 612


>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1327

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 24/77 (31%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = +1

Query: 4    KNSKDTIQSKNALESYCFNXKSTMED-EKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAX 180
            K +K+ ++++N LESY ++ K+ + D EKL  K+++ DK+ I +     I W+D NQ A 
Sbjct: 1225 KKTKEKVEARNELESYAYSLKNQVGDKEKLGGKLSEDDKKTITEAVEKAISWMDKNQDAS 1284

Query: 181  KEEYEHKQKELEGVCNP 231
             E+++ ++++ + + +P
Sbjct: 1285 VEDFKKEKRKWKMLYSP 1301


>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
          Length = 823

 Score = 37.9 bits (84), Expect = 0.022
 Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = +1

Query: 16  DTIQSKNALESYCFNXKSTMED-EKLKDKITDSDKQIIMDKCNDTIKWLDSN-QLAXKEE 189
           D  +++  L++   + K T+ D +K   + T  D+      C++  +WL++N   A  EE
Sbjct: 731 DKAEAQFELKALITSTKETIADPDKHMGRFTKDDRVSGNRYCDEKSEWLENNADTASLEE 790

Query: 190 YEHKQKELEGVCNPIITKL 246
              ++++L GV  PI++KL
Sbjct: 791 IVKQKEDLAGVLQPILSKL 809


>SB_18205| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 148

 Score = 33.5 bits (73), Expect = 0.47
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +2

Query: 35  MLSSRTASTXSPPWKMRSLRTRLLTPISKSSWTS---ATTPSNGSTRISWLXRKSMSTS 202
           +L S T  T + P   R+ R    T IS   WTS        +G+ RISWL R + STS
Sbjct: 32  VLCSTTTPTSNDPRTTRTPRMHGTTRISWMPWTSRMYGPYGPDGTPRISWLPRITRSTS 90


>SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 58

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +1

Query: 136 CNDTIKWLDSN-QLAXKEEYEHKQKELEGVCNPIITKL 246
           C++  +WL++N   A  EE   ++++L GV  PI++KL
Sbjct: 7   CDEKSEWLENNADTASLEEIVKQKEDLAGVLQPILSKL 44


>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1019

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +1

Query: 25  QSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSN 168
           ++KNALES+ F  +  M  E  +   T+++++ I +       WLD +
Sbjct: 718 RAKNALESHIFGVRDEMNSELGEKLSTEAERETISEALTAASDWLDED 765


>SB_39087| Best HMM Match : ATP-synt_DE_N (HMM E-Value=4.1)
          Length = 171

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = -2

Query: 232 SGCKHPPVPSAC---AHTLPXQPADS 164
           SG K+PP+PS C    HT P  PA +
Sbjct: 8   SGGKYPPLPSVCPPKTHTTPTAPAST 33


>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
          Length = 782

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
 Frame = +1

Query: 10  SKDTIQSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKC----NDTIKWL--DSNQ 171
           +K+ +Q +  L ++    K  +E EK+  + TD  K + ++K      + I+ L  + +Q
Sbjct: 298 NKERLQIERKLANFTKTSKKEVESEKVISR-TDGKKVLELEKDISKKKNEIRRLRTELSQ 356

Query: 172 LAXKEEYEHKQKELEG 219
           L    +++H +KELEG
Sbjct: 357 LQENSKHKHFEKELEG 372


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,275,667
Number of Sequences: 59808
Number of extensions: 173604
Number of successful extensions: 740
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5129408549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)