Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_F05_e614_11.seq
(1568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 121 1e-27
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 111 1e-24
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 74 2e-13
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 74 2e-13
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 73 4e-13
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 73 4e-13
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 71 2e-12
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 71 2e-12
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 68 2e-11
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 35 0.18
AF099925-12|AAC69509.1| 257|Caenorhabditis elegans Hypothetical... 31 2.2
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 121 bits (292), Expect = 1e-27
Identities = 54/80 (67%), Positives = 66/80 (82%)
Frame = +1
Query: 13 KDTIQSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAXKEEY 192
KD I +KN LESY FN K T+EDEKLKDKI+ DK+ I DKC++ +KWLDSNQ A KEE+
Sbjct: 534 KDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEF 593
Query: 193 EHKQKELEGVCNPIITKLYQ 252
EH+QK+LEG+ NPII+KLYQ
Sbjct: 594 EHQQKDLEGLANPIISKLYQ 613
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 111 bits (268), Expect = 1e-24
Identities = 50/80 (62%), Positives = 63/80 (78%)
Frame = +1
Query: 13 KDTIQSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAXKEEY 192
KD I +KN LESY FN K T+EDEKLKDKI+ DK+ I DKC++ +KWLDSNQ A KEE+
Sbjct: 534 KDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEF 593
Query: 193 EHKQKELEGVCNPIITKLYQ 252
E +QK+LEG+ P ++KLYQ
Sbjct: 594 ESQQKDLEGLAKPDLSKLYQ 613
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 KNSKDTIQSKNALESYCFNXKSTMED-EKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAX 180
K KD +++N LESY +N K+ +ED EKL K+ + DK+ I + + I WL SN A
Sbjct: 558 KKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEAS 617
Query: 181 KEEYEHKQKELEGVCNPIITKLYQ 252
EE + ++K+LE PI++KLY+
Sbjct: 618 AEELKEQKKDLESKVQPIVSKLYK 641
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 KNSKDTIQSKNALESYCFNXKSTMED-EKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAX 180
K KD +++N LESY +N K+ +ED EKL K+ + DK+ I + + I WL SN A
Sbjct: 558 KKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEAS 617
Query: 181 KEEYEHKQKELEGVCNPIITKLYQ 252
EE + ++K+LE PI++KLY+
Sbjct: 618 AEELKEQKKDLESKVQPIVSKLYK 641
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 73.3 bits (172), Expect = 4e-13
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 KDTIQSKNALESYCFNXKSTMED-EKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAXKEE 189
K+ ++S+N LE+Y + K+ + D EKL K+TD DK I I+WL SNQ A EE
Sbjct: 189 KEKVESRNELEAYAYQIKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEE 248
Query: 190 YEHKQKELEGVCNPIITKLY 249
+ ++KELE V PI++KLY
Sbjct: 249 NKEQKKELESVVQPIVSKLY 268
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 73.3 bits (172), Expect = 4e-13
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 KDTIQSKNALESYCFNXKSTMED-EKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAXKEE 189
K+ ++S+N LE+Y + K+ + D EKL K+TD DK I I+WL SNQ A EE
Sbjct: 558 KEKVESRNELEAYAYQMKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEE 617
Query: 190 YEHKQKELEGVCNPIITKLY 249
+ ++KELE V PI++KLY
Sbjct: 618 NKEQKKELESVVQPIVSKLY 637
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/80 (37%), Positives = 51/80 (63%)
Frame = +1
Query: 13 KDTIQSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAXKEEY 192
++ +Q++N LE+Y F K +++ K++ D + ++T++WLDSN LA K+E
Sbjct: 534 RERVQARNQLEAYAFQIKQALDE--YSSKLSTEDASRAKEAVDETLRWLDSNSLAEKDEI 591
Query: 193 EHKQKELEGVCNPIITKLYQ 252
E K KEL+ VC I+TK++Q
Sbjct: 592 EAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/80 (37%), Positives = 51/80 (63%)
Frame = +1
Query: 13 KDTIQSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAXKEEY 192
++ +Q++N LE+Y F K +++ K++ D + ++T++WLDSN LA K+E
Sbjct: 534 RERVQARNQLEAYAFQIKQALDE--YSSKLSTEDASRAKEAVDETLRWLDSNSLAEKDEI 591
Query: 193 EHKQKELEGVCNPIITKLYQ 252
E K KEL+ VC I+TK++Q
Sbjct: 592 EAKDKELKSVCQSILTKMHQ 611
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 67.7 bits (158), Expect = 2e-11
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +1
Query: 13 KDTIQSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLAXKEEY 192
+D I S+N LE+Y F K +E+ ++ D + D DT++W++ N LA K+E
Sbjct: 534 RDRISSRNQLEAYAFQVKQALEEHG--SLLSAEDAKRAKDAVEDTLRWMERNTLADKDEI 591
Query: 193 EHKQKELEGVCNPIITKLYQ 252
E K KEL+ +C I+TK++Q
Sbjct: 592 EAKDKELKSICQDILTKMHQ 611
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 34.7 bits (76), Expect = 0.18
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 13 KDTIQSKNALESYCFNXKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWL-DSNQLAXKEE 189
K +KN+LE Y + + + D+ + IT + T WL D + A ++
Sbjct: 571 KAKADAKNSLEEYVYEMRDKVSDQ-YAEFITPAAADEFRSVLTSTEDWLYDEGEDAERDV 629
Query: 190 YEHKQKELEGVCNPIITK 243
YE + EL+ V P++ +
Sbjct: 630 YEKRLSELKAVGTPVVER 647
>AF099925-12|AAC69509.1| 257|Caenorhabditis elegans Hypothetical
protein K01A2.10 protein.
Length = 257
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 5 KTVRTLFNRRMLSSRTASTXSPPWKMRSLRTRLLTPISKSSWT-SATTPSNGSTRISWLX 181
+ + T +RR SS+ ++T SPP S R+ P+S + S G++RIS +
Sbjct: 185 EAMATSQHRRRASSQLSTTSSPPMTSPSSPHRIFPPVSSGLLSASVAVTYPGNSRIS-IQ 243
Query: 182 RKSMSTSR 205
++S S R
Sbjct: 244 KRSTSAMR 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,447,187
Number of Sequences: 27780
Number of extensions: 126204
Number of successful extensions: 548
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4535578426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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