Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_F04_e606_12.seq
         (1600 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0931 - 7351306-7351371,7351620-7351772,7352343-7352484,735...    31   1.9  

>01_01_0931 -
           7351306-7351371,7351620-7351772,7352343-7352484,
           7352604-7352791,7353117-7353179,7353541-7353585,
           7353658-7353792,7354515-7354623,7355032-7355084,
           7355168-7355317,7355714-7355722,7356161-7356577
          Length = 509

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 646 IMQKMTXGTTSAGMHMYIPWIHFRXSLCLLH 738
           I++    G+TSAG+H  +PW+++   + + H
Sbjct: 140 ILEICITGSTSAGLHQILPWLYYHKVIGVSH 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,248,513
Number of Sequences: 37544
Number of extensions: 477789
Number of successful extensions: 1057
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5186142276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)