Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_F03_e598_11.seq
(1567 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 293 2e-79
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 293 2e-79
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 285 5e-77
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 2.5
02_01_0759 - 5628913-5630870,5631023-5631047 31 2.5
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 31 3.3
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 30 5.7
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 293 bits (720), Expect = 2e-79
Identities = 133/191 (69%), Positives = 153/191 (80%)
Frame = +3
Query: 129 CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 308
CYR KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEALEA
Sbjct: 315 CYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEA 374
Query: 309 GRICCNKYLVKNCGKDQFHIRMRLHPFHVXRINKMLSCAGADRLQTGMRGAFGKPQGTVA 488
RI CNKY+ K+ GKD FH+R+ HP+HV RINKMLSCAGADRLQTGMRGAFGKP GT A
Sbjct: 375 ARIACNKYMAKHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCA 434
Query: 489 RVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTXYEREEFEKLRDA 668
RVRIGQ ++SVR D A EALRRAKFKFPGRQ++ S KWGFT ++R+E+ KL+
Sbjct: 435 RVRIGQVLLSVRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGFTRFKRDEYLKLKSE 494
Query: 669 GRFANDGCNVK 701
GR DG N K
Sbjct: 495 GRIVPDGVNAK 505
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 293 bits (719), Expect = 2e-79
Identities = 134/191 (70%), Positives = 153/191 (80%)
Frame = +3
Query: 129 CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 308
CYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +SSEALEA
Sbjct: 8 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEA 67
Query: 309 GRICCNKYLVKNCGKDQFHIRMRLHPFHVXRINKMLSCAGADRLQTGMRGAFGKPQGTVA 488
RI CNKY+ KN GKD FH+R+R+HPFHV RINKMLSCAGADRLQTGMRGAFGKPQGT A
Sbjct: 68 ARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCA 127
Query: 489 RVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTXYEREEFEKLRDA 668
RV IGQ ++SVR + EALRRAKFKFPGRQKI S+KWGFT + REE+ KL+
Sbjct: 128 RVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAE 187
Query: 669 GRFANDGCNVK 701
GR +DG N +
Sbjct: 188 GRIMSDGVNAQ 198
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 285 bits (700), Expect = 5e-77
Identities = 130/191 (68%), Positives = 150/191 (78%)
Frame = +3
Query: 129 CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 308
CYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63
Query: 309 GRICCNKYLVKNCGKDQFHIRMRLHPFHVXRINKMLSCAGADRLQTGMRGAFGKPQGTVA 488
RI CNKY+ K+ GKD FH+R+R+HPFHV RINKMLSCAGADRLQTGMRGAFGKPQGT A
Sbjct: 64 ARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCA 123
Query: 489 RVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTXYEREEFEKLRDA 668
RV IGQ ++SVR EALRRAKFKFPGRQKI S+KWGFT + R+E+ +L+
Sbjct: 124 RVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSE 183
Query: 669 GRFANDGCNVK 701
GR DG N K
Sbjct: 184 GRIMPDGVNAK 194
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 31.1 bits (67), Expect = 2.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 231 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 350
T D P C +HL SD Y S E ++AG+ C L K G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>02_01_0759 - 5628913-5630870,5631023-5631047
Length = 660
Score = 31.1 bits (67), Expect = 2.5
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = -1
Query: 532 SLERTDIMGCPIRT---RATVPWGFPNAPRIPVWSLSAPAHDNILLMRMTWKGCSLIRMW 362
SLER DI CP+ T A V G PN + V S S +D +R + CS I+
Sbjct: 233 SLERLDITRCPLITDKGLAAVAHGCPNLLSLTVESCSGVGNDG---LRAIGRSCSKIQAL 289
Query: 361 N 359
N
Sbjct: 290 N 290
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 30.7 bits (66), Expect = 3.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 336 RGTCCNRYGLLPAPQNSAARTHQTLSARIVGSHPLS 229
R CC GL P P S+ R+ +L A S P+S
Sbjct: 179 RSRCCRHRGLSPPPSRSSPRSPSSLPAAPAASLPVS 214
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.9 bits (64), Expect = 5.7
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -1
Query: 511 MGCPIRTRATVPWGFPNAPRIPVWSLSAPAH 419
+ CP+ + + VP P++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,450,322
Number of Sequences: 37544
Number of extensions: 532614
Number of successful extensions: 1323
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5058519088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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