Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_F02_e590_12.seq
         (1557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       29   0.070
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   2.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 29.5 bits (63), Expect = 0.070
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -1

Query: 636 YSSKFCHSTKIYCLLVNHQPIDI*SFFGMNCP*FKILWHSKKKRKLFNTK 487
           Y++K+CHS KI+     H P  +    G  CP   I  H  ++     T+
Sbjct: 294 YATKYCHSLKIHLRRYGHTPNVVLDEEGNPCPDIIIDVHGTRRGPKIKTQ 343


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 58  AAGNWHEGDEAYAQ 99
           A G W+EG E Y+Q
Sbjct: 101 AIGGWNEGSETYSQ 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,271
Number of Sequences: 336
Number of extensions: 5224
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46910650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)